RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 LAS1LQ9Y4W2 734 aaKnown RBP21.11■□□□□ 0.97
PRKCSH-217ENST00000592741 EID1Q9Y6B2 187 aa21.11■□□□□ 0.97
PRKCSH-217ENST00000592741 GNAI1P63096 354 aa21.1■□□□□ 0.97
PRKCSH-217ENST00000592741 IFT57Q9NWB7 429 aa21.1■□□□□ 0.97
PRKCSH-217ENST00000592741 TTC21BQ7Z4L5 1316 aa21.09■□□□□ 0.97
PRKCSH-217ENST00000592741 SLIT1O75093 1534 aa21.08■□□□□ 0.97
PRKCSH-217ENST00000592741 PLEKHG3A1L390 1219 aa21.08■□□□□ 0.96
PRKCSH-217ENST00000592741 CEBPAP49715 358 aaPredicted RBP21.08■□□□□ 0.96
PRKCSH-217ENST00000592741 BRPF1P55201 1214 aaPredicted RBP21.08■□□□□ 0.96
PRKCSH-217ENST00000592741 ACEP12821 1306 aa21.07■□□□□ 0.96
PRKCSH-217ENST00000592741 HDAC1Q13547 482 aaPredicted RBP21.07■□□□□ 0.96
PRKCSH-217ENST00000592741 TMEM57Q8N5G2 664 aa21.07■□□□□ 0.96
PRKCSH-217ENST00000592741 PTPRUQ92729 1446 aa21.07■□□□□ 0.96
PRKCSH-217ENST00000592741 ARHGAP23Q9P227 1491 aa21.06■□□□□ 0.96
PRKCSH-217ENST00000592741 OVOS2A0A0J9YW53 1432 aa21.06■□□□□ 0.96
PRKCSH-217ENST00000592741 USP6P35125 1406 aa21.06■□□□□ 0.96
PRKCSH-217ENST00000592741 OVOS2Q6IE36 1432 aa21.06■□□□□ 0.96
PRKCSH-217ENST00000592741 THUMPD2Q9BTF0 503 aaKnown RBP21.06■□□□□ 0.96
PRKCSH-217ENST00000592741 DLG5Q8TDM6 1919 aa21.06■□□□□ 0.96
PRKCSH-217ENST00000592741 SLC26A8Q96RN1 970 aa21.05■□□□□ 0.96
PRKCSH-217ENST00000592741 ZNF853P0CG23 659 aa21.04■□□□□ 0.96
PRKCSH-217ENST00000592741 FER1L4A9Z1Z3 1794 aa21.04■□□□□ 0.96
PRKCSH-217ENST00000592741 NALCNQ8IZF0 1738 aa21.04■□□□□ 0.96
PRKCSH-217ENST00000592741 DEKP35659 375 aaKnown RBP21.04■□□□□ 0.96
PRKCSH-217ENST00000592741 ZBTB40Q9NUA8 1239 aa21.03■□□□□ 0.96
PRKCSH-217ENST00000592741 USP35Q9P2H5 1018 aa21.03■□□□□ 0.96
PRKCSH-217ENST00000592741 PTCH1Q13635 1447 aa21.03■□□□□ 0.96
PRKCSH-217ENST00000592741 VAMP4O75379 141 aa21.02■□□□□ 0.96
PRKCSH-217ENST00000592741 MBIPQ9NS73 344 aa21.02■□□□□ 0.96
PRKCSH-217ENST00000592741 DIP2AQ14689 1571 aa21.02■□□□□ 0.96
PRKCSH-217ENST00000592741 NUTM2FA1L443 756 aa21.02■□□□□ 0.96
PRKCSH-217ENST00000592741 TBX22Q9Y458 520 aa21.02■□□□□ 0.96
PRKCSH-217ENST00000592741 USP19O94966 1318 aa21.02■□□□□ 0.95
PRKCSH-217ENST00000592741 SLC4A3P48751 1232 aa21.01■□□□□ 0.95
PRKCSH-217ENST00000592741 CFAP44Q96MT7 982 aa21.01■□□□□ 0.95
PRKCSH-217ENST00000592741 AMOTL2Q9Y2J4 779 aa21.01■□□□□ 0.95
PRKCSH-217ENST00000592741 EIF4A2Q14240 407 aaKnown RBP21.01■□□□□ 0.95
PRKCSH-217ENST00000592741 MRPL50Q8N5N7 158 aaKnown RBP21.01■□□□□ 0.95
PRKCSH-217ENST00000592741 ARHGAP45Q92619 1136 aa21.01■□□□□ 0.95
PRKCSH-217ENST00000592741 USP31Q70CQ4 1352 aa21■□□□□ 0.95
PRKCSH-217ENST00000592741 CHMP4BQ9H444 224 aaKnown RBP20.99■□□□□ 0.95
PRKCSH-217ENST00000592741 SEC24BO95487 1268 aa20.99■□□□□ 0.95
PRKCSH-217ENST00000592741 UPF2Q9HAU5 1272 aaKnown RBP20.99■□□□□ 0.95
PRKCSH-217ENST00000592741 SMC5Q8IY18 1101 aa20.98■□□□□ 0.95
PRKCSH-217ENST00000592741 TSPYL6Q8N831 410 aa20.98■□□□□ 0.95
PRKCSH-217ENST00000592741 TTC21AQ8NDW8 1320 aa20.98■□□□□ 0.95
PRKCSH-217ENST00000592741 SSH2Q76I76 1423 aa20.98■□□□□ 0.95
PRKCSH-217ENST00000592741 TWISTNBQ3B726 338 aaPredicted RBP20.98■□□□□ 0.95
PRKCSH-217ENST00000592741 PLPPR3Q6T4P5 718 aa20.98■□□□□ 0.95
PRKCSH-217ENST00000592741 THEMISQ8N1K5 641 aaPredicted RBP20.98■□□□□ 0.95
PRKCSH-217ENST00000592741 PIK3R4Q99570 1358 aa20.97■□□□□ 0.95
PRKCSH-217ENST00000592741 PEAK1Q9H792 1746 aa20.97■□□□□ 0.95
PRKCSH-217ENST00000592741 SULT6B1Q6IMI4 303 aa20.97■□□□□ 0.95
PRKCSH-217ENST00000592741 FAM83GA6ND36 823 aa20.96■□□□□ 0.95
PRKCSH-217ENST00000592741 AEBP1Q8IUX7 1158 aa20.96■□□□□ 0.95
PRKCSH-217ENST00000592741 RGPD1P0DJD0 1748 aa20.95■□□□□ 0.94
PRKCSH-217ENST00000592741 RIMS1Q86UR5 1692 aaKnown RBP20.95■□□□□ 0.94
PRKCSH-217ENST00000592741 ELL2O00472 640 aaPredicted RBP20.94■□□□□ 0.94
PRKCSH-217ENST00000592741 XRN1Q8IZH2 1706 aaKnown RBP20.94■□□□□ 0.94
PRKCSH-217ENST00000592741 C8orf58Q8NAV2 365 aa20.93■□□□□ 0.94
PRKCSH-217ENST00000592741 ABCC4O15439 1325 aa20.93■□□□□ 0.94
PRKCSH-217ENST00000592741 DCTN1Q14203 1278 aa20.93■□□□□ 0.94
PRKCSH-217ENST00000592741 FMN2Q9NZ56 1722 aa20.92■□□□□ 0.94
PRKCSH-217ENST00000592741 BECN1Q14457 450 aa20.92■□□□□ 0.94
PRKCSH-217ENST00000592741 HSP90AB2PQ58FF8 381 aa20.92■□□□□ 0.94
PRKCSH-217ENST00000592741 API5Q9BZZ5 524 aaKnown RBP20.92■□□□□ 0.94
PRKCSH-217ENST00000592741 ARHGEF10O15013 1369 aa20.91■□□□□ 0.94
PRKCSH-217ENST00000592741 ZBTB7BO15156 539 aaPredicted RBP20.91■□□□□ 0.94
PRKCSH-217ENST00000592741 NGDNQ8NEJ9 315 aaKnown RBP20.91■□□□□ 0.94
PRKCSH-217ENST00000592741 TBC1D32Q96NH3 1257 aa20.91■□□□□ 0.94
PRKCSH-217ENST00000592741 HAP1P54257 671 aaPredicted RBP20.9■□□□□ 0.94
PRKCSH-217ENST00000592741 RGPD8O14715 1765 aaPredicted RBP20.9■□□□□ 0.94
PRKCSH-217ENST00000592741 NUCB1Q02818 461 aa20.9■□□□□ 0.94
PRKCSH-217ENST00000592741 SOX12O15370 315 aa20.89■□□□□ 0.94
PRKCSH-217ENST00000592741 SBNO1A3KN83 1393 aa20.89■□□□□ 0.93
PRKCSH-217ENST00000592741 ANKARQ7Z5J8 1434 aa20.89■□□□□ 0.93
PRKCSH-217ENST00000592741 FLT4P35916 1363 aa20.89■□□□□ 0.93
PRKCSH-217ENST00000592741 MAP3K19Q56UN5 1328 aa20.88■□□□□ 0.93
PRKCSH-217ENST00000592741 NFKBIBQ15653 356 aa20.87■□□□□ 0.93
PRKCSH-217ENST00000592741 PIK3C2AO00443 1686 aa20.87■□□□□ 0.93
PRKCSH-217ENST00000592741 KIF24Q5T7B8 1368 aa20.86■□□□□ 0.93
PRKCSH-217ENST00000592741 CHL1O00533 1208 aa20.86■□□□□ 0.93
PRKCSH-217ENST00000592741 GCC1Q96CN9 775 aa20.86■□□□□ 0.93
PRKCSH-217ENST00000592741 CHD1LQ86WJ1 897 aa20.86■□□□□ 0.93
PRKCSH-217ENST00000592741 KIAA0232Q92628 1395 aa20.85■□□□□ 0.93
PRKCSH-217ENST00000592741 CEP170BQ9Y4F5 1589 aaPredicted RBP20.85■□□□□ 0.93
PRKCSH-217ENST00000592741 MCM10Q7L590 875 aa20.85■□□□□ 0.93
PRKCSH-217ENST00000592741 AMPHP49418 695 aa20.84■□□□□ 0.93
PRKCSH-217ENST00000592741 LNPKQ9C0E8 428 aa20.84■□□□□ 0.93
PRKCSH-217ENST00000592741 C1orf115Q9H7X2 142 aa20.84■□□□□ 0.93
PRKCSH-217ENST00000592741 KCNA6P17658 529 aa20.82■□□□□ 0.92
PRKCSH-217ENST00000592741 KDRP35968 1356 aa20.82■□□□□ 0.92
PRKCSH-217ENST00000592741 CRB1P82279 1406 aa20.82■□□□□ 0.92
PRKCSH-217ENST00000592741 IGSF1Q8N6C5 1336 aa20.8■□□□□ 0.92
PRKCSH-217ENST00000592741 MFAP1P55081 439 aaKnown RBP20.8■□□□□ 0.92
PRKCSH-217ENST00000592741 ANKRD45Q5TZF3 282 aa20.8■□□□□ 0.92
PRKCSH-217ENST00000592741 USP54Q70EL1 1684 aa20.8■□□□□ 0.92
PRKCSH-217ENST00000592741 RTF1Q92541 710 aaKnown RBP20.8■□□□□ 0.92
PRKCSH-217ENST00000592741 C22orf23Q9BZE7 217 aa20.8■□□□□ 0.92
PRKCSH-217ENST00000592741 NLRP6P59044 892 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms