RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 CDC42BPGQ6DT37 1551 aa22.3■■□□□ 1.16
SPC24-206ENST00000592540 CDC45O75419 566 aa22.3■■□□□ 1.16
SPC24-206ENST00000592540 CD163L1Q9NR16 1453 aa22.3■■□□□ 1.16
SPC24-206ENST00000592540 VAMP4O75379 141 aa22.3■■□□□ 1.16
SPC24-206ENST00000592540 ABCC3O15438 1527 aa22.3■■□□□ 1.16
SPC24-206ENST00000592540 ARHGAP31Q2M1Z3 1444 aa22.29■■□□□ 1.16
SPC24-206ENST00000592540 ATAD2Q6PL18 1390 aa22.28■■□□□ 1.16
SPC24-206ENST00000592540 KIF20BQ96Q89 1820 aa22.28■■□□□ 1.16
SPC24-206ENST00000592540 ZSCAN30Q86W11 494 aa22.28■■□□□ 1.16
SPC24-206ENST00000592540 ANP32BQ92688 251 aaKnown RBP22.28■■□□□ 1.16
SPC24-206ENST00000592540 FAM135BQ49AJ0 1406 aa22.28■■□□□ 1.16
SPC24-206ENST00000592540 STK26Q9P289 416 aa22.28■■□□□ 1.16
SPC24-206ENST00000592540 ZFYVE9O95405 1425 aa22.27■■□□□ 1.16
SPC24-206ENST00000592540 PRKAR2BP31323 418 aa22.26■■□□□ 1.15
SPC24-206ENST00000592540 CLTCQ00610 1675 aaKnown RBP22.26■■□□□ 1.15
SPC24-206ENST00000592540 ABCC4O15439 1325 aa22.26■■□□□ 1.15
SPC24-206ENST00000592540 KIAA1211Q6ZU35 1233 aa22.25■■□□□ 1.15
SPC24-206ENST00000592540 PKNOX2Q96KN3 472 aa22.25■■□□□ 1.15
SPC24-206ENST00000592540 GSPT1P15170 499 aaKnown RBP22.25■■□□□ 1.15
SPC24-206ENST00000592540 RABEP1Q15276 862 aa22.25■■□□□ 1.15
SPC24-206ENST00000592540 TSPYL6Q8N831 410 aa22.25■■□□□ 1.15
SPC24-206ENST00000592540 ZNF445P59923 1031 aa22.24■■□□□ 1.15
SPC24-206ENST00000592540 ZMYND15Q9H091 742 aa22.24■■□□□ 1.15
SPC24-206ENST00000592540 PTPRMP28827 1452 aa22.23■■□□□ 1.15
SPC24-206ENST00000592540 ASXL2Q76L83 1435 aa22.23■■□□□ 1.15
SPC24-206ENST00000592540 MINK1Q8N4C8 1332 aaPredicted RBP22.23■■□□□ 1.15
SPC24-206ENST00000592540 NUCB2P80303 420 aa22.23■■□□□ 1.15
SPC24-206ENST00000592540 NFE2L2Q16236 605 aa22.23■■□□□ 1.15
SPC24-206ENST00000592540 THUMPD2Q9BTF0 503 aaKnown RBP22.23■■□□□ 1.15
SPC24-206ENST00000592540 OFD1O75665 1012 aa22.22■■□□□ 1.15
SPC24-206ENST00000592540 MCTP1Q6DN14 999 aa22.22■■□□□ 1.15
SPC24-206ENST00000592540 PLEKHM2Q8IWE5 1019 aa22.22■■□□□ 1.15
SPC24-206ENST00000592540 CALD1Q05682 793 aaKnown RBP22.22■■□□□ 1.15
SPC24-206ENST00000592540 HDGFL2Q7Z4V5 671 aaPredicted RBP22.22■■□□□ 1.15
SPC24-206ENST00000592540 KNDC1Q76NI1 1749 aa22.21■■□□□ 1.15
SPC24-206ENST00000592540 MSNP26038 577 aaKnown RBP22.21■■□□□ 1.15
SPC24-206ENST00000592540 PHACTR3Q96KR7 559 aa22.21■■□□□ 1.15
SPC24-206ENST00000592540 MLH3Q9UHC1 1453 aa22.21■■□□□ 1.15
SPC24-206ENST00000592540 CYP2E1P05181 493 aaPredicted RBP22.2■■□□□ 1.15
SPC24-206ENST00000592540 GNAI1P63096 354 aa22.2■■□□□ 1.15
SPC24-206ENST00000592540 CFAP44Q96MT7 982 aa22.2■■□□□ 1.15
SPC24-206ENST00000592540 ELL2O00472 640 aaPredicted RBP22.2■■□□□ 1.14
SPC24-206ENST00000592540 LMBRD1Q9NUN5 540 aa22.2■■□□□ 1.14
SPC24-206ENST00000592540 IFT57Q9NWB7 429 aa22.2■■□□□ 1.14
SPC24-206ENST00000592540 MAP2P11137 1827 aaKnown RBP22.2■■□□□ 1.14
SPC24-206ENST00000592540 ZSCAN23Q3MJ62 389 aa22.19■■□□□ 1.14
SPC24-206ENST00000592540 CAVIN1Q6NZI2 390 aaKnown RBP22.19■■□□□ 1.14
SPC24-206ENST00000592540 POGZQ7Z3K3 1410 aa22.19■■□□□ 1.14
SPC24-206ENST00000592540 MYO5BQ9ULV0 1848 aa22.19■■□□□ 1.14
SPC24-206ENST00000592540 USP26Q9BXU7 913 aa22.19■■□□□ 1.14
SPC24-206ENST00000592540 SENP3Q9H4L4 574 aaPredicted RBP22.19■■□□□ 1.14
SPC24-206ENST00000592540 MBIPQ9NS73 344 aa22.19■■□□□ 1.14
SPC24-206ENST00000592540 TTC22Q5TAA0 569 aa22.18■■□□□ 1.14
SPC24-206ENST00000592540 PRAM1Q96QH2 718 aa22.18■■□□□ 1.14
SPC24-206ENST00000592540 PDCL3Q9H2J4 239 aa22.18■■□□□ 1.14
SPC24-206ENST00000592540 ZNF853P0CG23 659 aa22.18■■□□□ 1.14
SPC24-206ENST00000592540 NCLP19338 710 aaKnown RBP22.18■■□□□ 1.14
SPC24-206ENST00000592540 HMOX1P09601 288 aa22.17■■□□□ 1.14
SPC24-206ENST00000592540 HS1BP3Q53T59 392 aa22.17■■□□□ 1.14
SPC24-206ENST00000592540 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.17■■□□□ 1.14
SPC24-206ENST00000592540 API5Q9BZZ5 524 aaKnown RBP22.17■■□□□ 1.14
SPC24-206ENST00000592540 DCTPP1Q9H773 170 aa22.17■■□□□ 1.14
SPC24-206ENST00000592540 POLKQ9UBT6 870 aa22.17■■□□□ 1.14
SPC24-206ENST00000592540 DLG5Q8TDM6 1919 aa22.17■■□□□ 1.14
SPC24-206ENST00000592540 TWISTNBQ3B726 338 aaPredicted RBP22.17■■□□□ 1.14
SPC24-206ENST00000592540 FBLN1P23142 703 aa22.16■■□□□ 1.14
SPC24-206ENST00000592540 PKP1Q13835 747 aa22.16■■□□□ 1.14
SPC24-206ENST00000592540 IDI1Q13907 227 aa22.15■■□□□ 1.14
SPC24-206ENST00000592540 RBSNQ9H1K0 784 aa22.15■■□□□ 1.14
SPC24-206ENST00000592540 CWC22Q9HCG8 908 aaKnown RBP22.15■■□□□ 1.14
SPC24-206ENST00000592540 CABP1Q9NZU7 370 aa22.15■■□□□ 1.14
SPC24-206ENST00000592540 KIF24Q5T7B8 1368 aa22.15■■□□□ 1.14
SPC24-206ENST00000592540 TERF1P54274 439 aa22.14■■□□□ 1.14
SPC24-206ENST00000592540 YTHDC2Q9H6S0 1430 aaKnown RBP22.14■■□□□ 1.14
SPC24-206ENST00000592540 YEATS2Q9ULM3 1422 aa22.14■■□□□ 1.13
SPC24-206ENST00000592540 INTS3Q68E01 1043 aaKnown RBP22.14■■□□□ 1.13
SPC24-206ENST00000592540 C8orf58Q8NAV2 365 aa22.14■■□□□ 1.13
SPC24-206ENST00000592540 C16orf71Q8IYS4 520 aaPredicted RBP22.13■■□□□ 1.13
SPC24-206ENST00000592540 PDLIM2Q96JY6 352 aa22.13■■□□□ 1.13
SPC24-206ENST00000592540 CDK19Q9BWU1 502 aa22.13■■□□□ 1.13
SPC24-206ENST00000592540 NOL7Q9UMY1 257 aaKnown RBP22.12■■□□□ 1.13
SPC24-206ENST00000592540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.12■■□□□ 1.13
SPC24-206ENST00000592540 PRIM1P49642 420 aaKnown RBP22.11■■□□□ 1.13
SPC24-206ENST00000592540 ARHGEF40Q8TER5 1519 aa22.11■■□□□ 1.13
SPC24-206ENST00000592540 PRPF40AO75400 957 aaKnown RBP22.11■■□□□ 1.13
SPC24-206ENST00000592540 ST18O60284 1047 aa22.1■■□□□ 1.13
SPC24-206ENST00000592540 GPT2Q8TD30 523 aa22.1■■□□□ 1.13
SPC24-206ENST00000592540 ZNF500O60304 480 aaPredicted RBP22.09■■□□□ 1.13
SPC24-206ENST00000592540 ZGPATQ8N5A5 531 aaKnown RBP22.09■■□□□ 1.13
SPC24-206ENST00000592540 OTUD7AQ8TE49 926 aaPredicted RBP22.09■■□□□ 1.13
SPC24-206ENST00000592540 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.09■■□□□ 1.13
SPC24-206ENST00000592540 SDSP20132 328 aa22.08■■□□□ 1.13
SPC24-206ENST00000592540 ANKRD44Q8N8A2 993 aa22.08■■□□□ 1.13
SPC24-206ENST00000592540 RBM27Q9P2N5 1060 aaKnown RBP22.08■■□□□ 1.13
SPC24-206ENST00000592540 ZDHHC9Q9Y397 364 aa22.08■■□□□ 1.13
SPC24-206ENST00000592540 ATP10DQ9P241 1426 aa22.08■■□□□ 1.13
SPC24-206ENST00000592540 IL13P35225 146 aa22.08■■□□□ 1.12
SPC24-206ENST00000592540 TMEM131LA2VDJ0 1609 aa22.07■■□□□ 1.12
SPC24-206ENST00000592540 CASC1Q6TDU7 716 aa22.07■■□□□ 1.12
SPC24-206ENST00000592540 SLC52A1Q9NWF4 448 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms