RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 ADGRL2O95490 1459 aa8.22□□□□□ -1.09
ERCC1-216ENST00000592444 FOXO3O43524 673 aa8.22□□□□□ -1.09
ERCC1-216ENST00000592444 TSPY4P0CV99 314 aa8.22□□□□□ -1.09
ERCC1-216ENST00000592444 TSPY10P0CW01 314 aa8.22□□□□□ -1.09
ERCC1-216ENST00000592444 CHGAP10645 457 aaKnown RBP8.22□□□□□ -1.09
ERCC1-216ENST00000592444 YBX3P16989 372 aaKnown RBP eCLIP8.22□□□□□ -1.093e-8■□□□□ 9.1
ERCC1-216ENST00000592444 EMP3P54852 163 aa8.22□□□□□ -1.09
ERCC1-216ENST00000592444 CABLES1Q8TDN4 633 aa8.22□□□□□ -1.09
ERCC1-216ENST00000592444 BCL11BQ9C0K0 894 aaPredicted RBP8.22□□□□□ -1.09
ERCC1-216ENST00000592444 MYO5BQ9ULV0 1848 aa8.22□□□□□ -1.09
ERCC1-216ENST00000592444 ADCY9O60503 1353 aa8.22□□□□□ -1.09
ERCC1-216ENST00000592444 EIF2AK4Q9P2K8 1649 aaKnown RBP8.21□□□□□ -1.09
ERCC1-216ENST00000592444 ABCC5O15440 1437 aa8.21□□□□□ -1.09
ERCC1-216ENST00000592444 THSD7AQ9UPZ6 1657 aa8.21□□□□□ -1.09
ERCC1-216ENST00000592444 XRN1Q8IZH2 1706 aaKnown RBP8.21□□□□□ -1.09
ERCC1-216ENST00000592444 RSPH4AQ5TD94 716 aa8.21□□□□□ -1.1
ERCC1-216ENST00000592444 CROCC2H7BZ55 1655 aa8.21□□□□□ -1.1
ERCC1-216ENST00000592444 FYCO1Q9BQS8 1478 aa8.2□□□□□ -1.1
ERCC1-216ENST00000592444 TOMM70O94826 608 aa8.2□□□□□ -1.1
ERCC1-216ENST00000592444 PSEN1P49768 467 aa8.2□□□□□ -1.1
ERCC1-216ENST00000592444 ESCO1Q5FWF5 840 aa8.2□□□□□ -1.1
ERCC1-216ENST00000592444 BTG4Q9NY30 223 aa8.2□□□□□ -1.1
ERCC1-216ENST00000592444 CIZ1Q9ULV3 898 aaPredicted RBP8.2□□□□□ -1.1
ERCC1-216ENST00000592444 SPATA31A5Q5VU36 1347 aa8.2□□□□□ -1.1
ERCC1-216ENST00000592444 SPATA31A7Q8IWB4 1347 aa8.2□□□□□ -1.1
ERCC1-216ENST00000592444 NEXMIFQ5QGS0 1516 aa8.19□□□□□ -1.1
ERCC1-216ENST00000592444 NLGN2Q8NFZ4 835 aa8.19□□□□□ -1.1
ERCC1-216ENST00000592444 SPATA31A3Q5VYP0 1347 aa8.19□□□□□ -1.1
ERCC1-216ENST00000592444 PDCD7Q8N8D1 485 aaKnown RBP8.18□□□□□ -1.1
ERCC1-216ENST00000592444 CASKIN1Q8WXD9 1431 aa8.18□□□□□ -1.1
ERCC1-216ENST00000592444 NRAPQ86VF7 1730 aa8.17□□□□□ -1.1
ERCC1-216ENST00000592444 KIAA1210Q9ULL0 1709 aa8.17□□□□□ -1.1
ERCC1-216ENST00000592444 PDE3BQ13370 1112 aa8.17□□□□□ -1.1
ERCC1-216ENST00000592444 PDAP1Q13442 181 aaKnown RBP8.17□□□□□ -1.1
ERCC1-216ENST00000592444 STK32BQ9NY57 414 aa8.17□□□□□ -1.1
ERCC1-216ENST00000592444 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.17□□□□□ -1.1
ERCC1-216ENST00000592444 G3V3G9 751 aa8.16□□□□□ -1.1
ERCC1-216ENST00000592444 PLSCR1O15162 318 aa8.16□□□□□ -1.1
ERCC1-216ENST00000592444 USP19O94966 1318 aa8.16□□□□□ -1.1
ERCC1-216ENST00000592444 SLC15A2Q16348 729 aa8.16□□□□□ -1.1
ERCC1-216ENST00000592444 GCC2Q8IWJ2 1684 aa8.16□□□□□ -1.1
ERCC1-216ENST00000592444 METP08581 1390 aa8.15□□□□□ -1.1
ERCC1-216ENST00000592444 LRPPRCP42704 1394 aaKnown RBP8.15□□□□□ -1.1
ERCC1-216ENST00000592444 TNRC18O15417 2968 aaPredicted RBP8.15□□□□□ -1.11
ERCC1-216ENST00000592444 FAM205CA6NFA0 338 aa8.14□□□□□ -1.11
ERCC1-216ENST00000592444 RGS19P49795 217 aa8.14□□□□□ -1.11
ERCC1-216ENST00000592444 ABHD8Q96I13 439 aa8.14□□□□□ -1.11
ERCC1-216ENST00000592444 KANK1Q14678 1352 aa8.13□□□□□ -1.11
ERCC1-216ENST00000592444 HS3ST6Q96QI5 342 aa8.13□□□□□ -1.11
ERCC1-216ENST00000592444 KRT28Q7Z3Y7 464 aa8.12□□□□□ -1.11
ERCC1-216ENST00000592444 RGPD3A6NKT7 1758 aaPredicted RBP8.12□□□□□ -1.11
ERCC1-216ENST00000592444 RGPD4Q7Z3J3 1758 aa8.12□□□□□ -1.11
ERCC1-216ENST00000592444 SPATA31A1Q5TZJ5 1347 aa8.11□□□□□ -1.11
ERCC1-216ENST00000592444 ARHGEF5Q12774 1597 aa8.11□□□□□ -1.11
ERCC1-216ENST00000592444 LMOD2Q6P5Q4 547 aa8.11□□□□□ -1.11
ERCC1-216ENST00000592444 RBM46Q8TBY0 533 aaKnown RBP8.11□□□□□ -1.11
ERCC1-216ENST00000592444 DUOX2Q9NRD8 1548 aa8.1□□□□□ -1.11
ERCC1-216ENST00000592444 NUTM2FA1L443 756 aa8.1□□□□□ -1.11
ERCC1-216ENST00000592444 PTF1AQ7RTS3 328 aa8.1□□□□□ -1.11
ERCC1-216ENST00000592444 NRXN3Q9Y4C0 1643 aa8.1□□□□□ -1.11
ERCC1-216ENST00000592444 LMTK2Q8IWU2 1503 aa8.09□□□□□ -1.11
ERCC1-216ENST00000592444 CCDC85CA6NKD9 419 aa8.09□□□□□ -1.11
ERCC1-216ENST00000592444 UBTFP17480 764 aaKnown RBP8.09□□□□□ -1.11
ERCC1-216ENST00000592444 POLD1P28340 1107 aa8.09□□□□□ -1.11
ERCC1-216ENST00000592444 CABP2Q9NPB3 220 aa8.09□□□□□ -1.11
ERCC1-216ENST00000592444 PRDM10Q9NQV6 1147 aa8.09□□□□□ -1.11
ERCC1-216ENST00000592444 USP35Q9P2H5 1018 aa8.09□□□□□ -1.11
ERCC1-216ENST00000592444 ABCA3Q99758 1704 aa8.09□□□□□ -1.11
ERCC1-216ENST00000592444 DHX57Q6P158 1386 aaKnown RBP8.09□□□□□ -1.12
ERCC1-216ENST00000592444 FOXN1O15353 648 aa8.08□□□□□ -1.12
ERCC1-216ENST00000592444 FSTL1Q12841 308 aa8.08□□□□□ -1.12
ERCC1-216ENST00000592444 TXNRD1Q16881 649 aa8.08□□□□□ -1.12
ERCC1-216ENST00000592444 NMRK2Q9NPI5 230 aa8.08□□□□□ -1.12
ERCC1-216ENST00000592444 TNS3Q68CZ2 1445 aa8.08□□□□□ -1.12
ERCC1-216ENST00000592444 RRBP1Q9P2E9 1410 aaKnown RBP8.08□□□□□ -1.12
ERCC1-216ENST00000592444 ARHGEF28Q8N1W1 1705 aaKnown RBP8.08□□□□□ -1.12
ERCC1-216ENST00000592444 COL14A1Q05707 1796 aaKnown RBP8.07□□□□□ -1.12
ERCC1-216ENST00000592444 CCDC144AA2RUR9 1427 aa8.07□□□□□ -1.12
ERCC1-216ENST00000592444 TECPR2O15040 1411 aa8.07□□□□□ -1.12
ERCC1-216ENST00000592444 ZNF710Q8N1W2 664 aa8.07□□□□□ -1.12
ERCC1-216ENST00000592444 KRTAP3-3Q9BYR6 98 aa8.07□□□□□ -1.12
ERCC1-216ENST00000592444 KRTAP3-2Q9BYR7 98 aa8.07□□□□□ -1.12
ERCC1-216ENST00000592444 ROBO2Q9HCK4 1378 aa8.07□□□□□ -1.12
ERCC1-216ENST00000592444 PDE4DIPQ5VU43 2346 aa8.06□□□□□ -1.12
ERCC1-216ENST00000592444 C16orf71Q8IYS4 520 aaPredicted RBP8.06□□□□□ -1.12
ERCC1-216ENST00000592444 PMFBP1Q8TBY8 1022 aa8.06□□□□□ -1.12
ERCC1-216ENST00000592444 STRN4Q9NRL3 753 aa8.06□□□□□ -1.12
ERCC1-216ENST00000592444 PSME1Q06323 249 aa8.05□□□□□ -1.12
ERCC1-216ENST00000592444 DPY19L2Q6NUT2 758 aa8.05□□□□□ -1.12
ERCC1-216ENST00000592444 BOLA1Q9Y3E2 137 aa8.05□□□□□ -1.12
ERCC1-216ENST00000592444 ERBINQ96RT1 1412 aa8.04□□□□□ -1.12
ERCC1-216ENST00000592444 TULP4Q9NRJ4 1543 aa8.04□□□□□ -1.12
ERCC1-216ENST00000592444 POTEB3A0JP26 581 aa8.04□□□□□ -1.12
ERCC1-216ENST00000592444 C11orf95C9JLR9 678 aaPredicted RBP8.04□□□□□ -1.12
ERCC1-216ENST00000592444 POTEBQ6S5H4 581 aa8.04□□□□□ -1.12
ERCC1-216ENST00000592444 BARGINQ6ZT62 677 aa8.04□□□□□ -1.12
ERCC1-216ENST00000592444 RRP7BPQ9NSQ0 103 aa8.04□□□□□ -1.12
ERCC1-216ENST00000592444 KIF15Q9NS87 1388 aa8.04□□□□□ -1.12
ERCC1-216ENST00000592444 ARHGEF10O15013 1369 aa8.03□□□□□ -1.12
ERCC1-216ENST00000592444 DOK7Q18PE1 504 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms