RNA–Protein interactions for RNA: ENST00000591974.5

LINC01539-205, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-205ENST00000591974 XPCQ01831 940 aaPredicted RBP13.87□□□□□ -0.19
LINC01539-205ENST00000591974 WWC1Q8IX03 1113 aa13.87□□□□□ -0.19
LINC01539-205ENST00000591974 DLG5Q8TDM6 1919 aa13.86□□□□□ -0.19
LINC01539-205ENST00000591974 NEFMP07197 916 aa13.86□□□□□ -0.19
LINC01539-205ENST00000591974 HSP90AB2PQ58FF8 381 aa13.86□□□□□ -0.19
LINC01539-205ENST00000591974 TNS3Q68CZ2 1445 aa13.85□□□□□ -0.19
LINC01539-205ENST00000591974 BRINP3Q76B58 766 aa13.85□□□□□ -0.19
LINC01539-205ENST00000591974 CRYBG1Q9Y4K1 1723 aa13.85□□□□□ -0.19
LINC01539-205ENST00000591974 ARHGEF10O15013 1369 aa13.85□□□□□ -0.19
LINC01539-205ENST00000591974 NHSL1Q5SYE7 1610 aa13.85□□□□□ -0.19
LINC01539-205ENST00000591974 LTBP4Q8N2S1 1624 aa13.85□□□□□ -0.19
LINC01539-205ENST00000591974 E9PSI1 815 aa13.84□□□□□ -0.19
LINC01539-205ENST00000591974 HOXC9P31274 260 aa13.84□□□□□ -0.19
LINC01539-205ENST00000591974 PRKAR2BP31323 418 aa13.84□□□□□ -0.19
LINC01539-205ENST00000591974 TMPOP42166 694 aaKnown RBP13.84□□□□□ -0.19
LINC01539-205ENST00000591974 SLFN5Q08AF3 891 aa13.84□□□□□ -0.19
LINC01539-205ENST00000591974 SLAIN2Q9P270 581 aa13.84□□□□□ -0.19
LINC01539-205ENST00000591974 MED1Q15648 1581 aaPredicted RBP13.84□□□□□ -0.19
LINC01539-205ENST00000591974 DUSP27Q5VZP5 1158 aa13.84□□□□□ -0.19
LINC01539-205ENST00000591974 WDR63Q8IWG1 891 aa13.84□□□□□ -0.19
LINC01539-205ENST00000591974 TRMT2AQ8IZ69 625 aaKnown RBP13.84□□□□□ -0.19
LINC01539-205ENST00000591974 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
LINC01539-205ENST00000591974 HMOX1P09601 288 aa13.83□□□□□ -0.2
LINC01539-205ENST00000591974 NEUROD2Q15784 382 aa13.83□□□□□ -0.2
LINC01539-205ENST00000591974 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
LINC01539-205ENST00000591974 GCP02774 474 aa13.82□□□□□ -0.2
LINC01539-205ENST00000591974 LMOD2Q6P5Q4 547 aa13.82□□□□□ -0.2
LINC01539-205ENST00000591974 KDRP35968 1356 aa13.82□□□□□ -0.2
LINC01539-205ENST00000591974 IP6K1Q92551 441 aa13.81□□□□□ -0.2
LINC01539-205ENST00000591974 DDX17Q92841 729 aaKnown RBP13.81□□□□□ -0.2
LINC01539-205ENST00000591974 SPATA31A3Q5VYP0 1347 aa13.81□□□□□ -0.2
LINC01539-205ENST00000591974 IGSF1Q8N6C5 1336 aa13.81□□□□□ -0.2
LINC01539-205ENST00000591974 FKBP8Q14318 412 aa13.8□□□□□ -0.2
LINC01539-205ENST00000591974 RCAN3Q9UKA8 241 aa13.8□□□□□ -0.2
LINC01539-205ENST00000591974 SOS2Q07890 1332 aaPredicted RBP13.8□□□□□ -0.2
LINC01539-205ENST00000591974 ABCC6O95255 1503 aa13.8□□□□□ -0.2
LINC01539-205ENST00000591974 RIPK4P57078 832 aa13.8□□□□□ -0.2
LINC01539-205ENST00000591974 NFE2L2Q16236 605 aa13.8□□□□□ -0.2
LINC01539-205ENST00000591974 SULT6B1Q6IMI4 303 aa13.8□□□□□ -0.2
LINC01539-205ENST00000591974 ARHGEF25Q86VW2 580 aa13.8□□□□□ -0.2
LINC01539-205ENST00000591974 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
LINC01539-205ENST00000591974 RGPD5Q99666 1765 aa13.79□□□□□ -0.2
LINC01539-205ENST00000591974 PIAS4Q8N2W9 510 aaPredicted RBP13.79□□□□□ -0.2
LINC01539-205ENST00000591974 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
LINC01539-205ENST00000591974 RGPD2P0DJD1 1756 aa13.78□□□□□ -0.2
LINC01539-205ENST00000591974 PHACTR3Q96KR7 559 aa13.78□□□□□ -0.2
LINC01539-205ENST00000591974 IL16Q14005 1332 aa13.78□□□□□ -0.2
LINC01539-205ENST00000591974 AEBP1Q8IUX7 1158 aa13.78□□□□□ -0.2
LINC01539-205ENST00000591974 EYA1Q99502 592 aa13.78□□□□□ -0.2
LINC01539-205ENST00000591974 CAMTA1Q9Y6Y1 1673 aa13.77□□□□□ -0.2
LINC01539-205ENST00000591974 ABCA3Q99758 1704 aa13.77□□□□□ -0.2
LINC01539-205ENST00000591974 ERICH6BQ5W0A0 696 aa13.77□□□□□ -0.21
LINC01539-205ENST00000591974 COL18A1P39060 1754 aa13.77□□□□□ -0.21
LINC01539-205ENST00000591974 ROBO1Q9Y6N7 1651 aa13.77□□□□□ -0.21
LINC01539-205ENST00000591974 LMOD3Q0VAK6 560 aa13.76□□□□□ -0.21
LINC01539-205ENST00000591974 FAM208AQ9UK61 1670 aaKnown RBP13.76□□□□□ -0.21
LINC01539-205ENST00000591974 MYH16Q9H6N6 1097 aa13.76□□□□□ -0.21
LINC01539-205ENST00000591974 AHDC1Q5TGY3 1603 aaPredicted RBP13.75□□□□□ -0.21
LINC01539-205ENST00000591974 CALD1Q05682 793 aaKnown RBP13.74□□□□□ -0.21
LINC01539-205ENST00000591974 CPDO75976 1380 aa13.74□□□□□ -0.21
LINC01539-205ENST00000591974 NCAPD2Q15021 1401 aa13.74□□□□□ -0.21
LINC01539-205ENST00000591974 RRP1P56182 461 aaKnown RBP13.74□□□□□ -0.21
LINC01539-205ENST00000591974 LTV1Q96GA3 475 aaPredicted RBP13.73□□□□□ -0.21
LINC01539-205ENST00000591974 LMO7Q8WWI1 1683 aa13.73□□□□□ -0.21
LINC01539-205ENST00000591974 ZBTB7CA1YPR0 619 aa13.72□□□□□ -0.21
LINC01539-205ENST00000591974 PLEKHG5O94827 1062 aa13.72□□□□□ -0.21
LINC01539-205ENST00000591974 ZC3H6P61129 1189 aaKnown RBP13.71□□□□□ -0.21
LINC01539-205ENST00000591974 IRX6P78412 446 aaPredicted RBP13.71□□□□□ -0.21
LINC01539-205ENST00000591974 GAS2L2Q8NHY3 880 aa13.71□□□□□ -0.21
LINC01539-205ENST00000591974 FANCIQ9NVI1 1328 aa13.71□□□□□ -0.21
LINC01539-205ENST00000591974 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
LINC01539-205ENST00000591974 ANKRD24Q8TF21 1146 aa13.7□□□□□ -0.22
LINC01539-205ENST00000591974 ERBB3P21860 1342 aa13.7□□□□□ -0.22
LINC01539-205ENST00000591974 NBPF6Q5VWK0 638 aa13.7□□□□□ -0.22
LINC01539-205ENST00000591974 CABLES1Q8TDN4 633 aa13.7□□□□□ -0.22
LINC01539-205ENST00000591974 NBPF4Q96M43 638 aa13.7□□□□□ -0.22
LINC01539-205ENST00000591974 AXIN2Q9Y2T1 843 aa13.7□□□□□ -0.22
LINC01539-205ENST00000591974 KIAA0232Q92628 1395 aa13.69□□□□□ -0.22
LINC01539-205ENST00000591974 IFT57Q9NWB7 429 aa13.69□□□□□ -0.22
LINC01539-205ENST00000591974 LRRC37A3O60309 1634 aa13.69□□□□□ -0.22
LINC01539-205ENST00000591974 COL22A1Q8NFW1 1626 aaPredicted RBP13.69□□□□□ -0.22
LINC01539-205ENST00000591974 VIRMAQ69YN4 1812 aaKnown RBP13.68□□□□□ -0.22
LINC01539-205ENST00000591974 MTHFSDQ2M296 383 aaKnown RBP13.68□□□□□ -0.22
LINC01539-205ENST00000591974 GNAI1P63096 354 aa13.67□□□□□ -0.22
LINC01539-205ENST00000591974 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.67□□□□□ -0.22
LINC01539-205ENST00000591974 PHLPP1O60346 1717 aa13.67□□□□□ -0.22
LINC01539-205ENST00000591974 HTATSF1O43719 755 aaKnown RBP13.67□□□□□ -0.22
LINC01539-205ENST00000591974 ZNF853P0CG23 659 aa13.67□□□□□ -0.22
LINC01539-205ENST00000591974 USHBP1Q8N6Y0 703 aa13.67□□□□□ -0.22
LINC01539-205ENST00000591974 TSR2Q969E8 191 aaKnown RBP13.67□□□□□ -0.22
LINC01539-205ENST00000591974 LRRC59Q96AG4 307 aaKnown RBP13.67□□□□□ -0.22
LINC01539-205ENST00000591974 FAM83GA6ND36 823 aa13.66□□□□□ -0.22
LINC01539-205ENST00000591974 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
LINC01539-205ENST00000591974 THUMPD2Q9BTF0 503 aaKnown RBP13.66□□□□□ -0.22
LINC01539-205ENST00000591974 PLEKHG2Q9H7P9 1386 aa13.66□□□□□ -0.22
LINC01539-205ENST00000591974 COL16A1Q07092 1604 aaPredicted RBP13.65□□□□□ -0.22
LINC01539-205ENST00000591974 RTF1Q92541 710 aaKnown RBP13.65□□□□□ -0.22
LINC01539-205ENST00000591974 PPP4R2Q9NY27 417 aa13.65□□□□□ -0.22
LINC01539-205ENST00000591974 MAP3K5Q99683 1374 aa13.65□□□□□ -0.23
LINC01539-205ENST00000591974 TOM1O60784 492 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms