RNA–Protein interactions for RNA: ENST00000591893.1

H3F3B-211, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 2,787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-211ENST00000591893 ADGRB1O14514 1584 aa21.89■■□□□ 1.1
H3F3B-211ENST00000591893 COL3A1P02461 1466 aaPredicted RBP21.88■■□□□ 1.09
H3F3B-211ENST00000591893 ATP7AQ04656 1500 aa21.88■■□□□ 1.09
H3F3B-211ENST00000591893 BRPF1P55201 1214 aaPredicted RBP21.88■■□□□ 1.09
H3F3B-211ENST00000591893 PKP1Q13835 747 aa21.88■■□□□ 1.09
H3F3B-211ENST00000591893 MROH1Q8NDA8 1641 aa21.88■■□□□ 1.09
H3F3B-211ENST00000591893 EFCAB6Q5THR3 1501 aa21.88■■□□□ 1.09
H3F3B-211ENST00000591893 EVC2Q86UK5 1308 aa21.88■■□□□ 1.09
H3F3B-211ENST00000591893 MCM5P33992 734 aa21.87■■□□□ 1.09
H3F3B-211ENST00000591893 PUS7Q96PZ0 661 aaKnown RBP21.87■■□□□ 1.09
H3F3B-211ENST00000591893 DYNC1I1O14576 645 aa21.87■■□□□ 1.09
H3F3B-211ENST00000591893 MTERF4Q7Z6M4 381 aaKnown RBP21.87■■□□□ 1.09
H3F3B-211ENST00000591893 ADGRB3O60242 1522 aa21.87■■□□□ 1.09
H3F3B-211ENST00000591893 SIRT2Q8IXJ6 389 aa21.87■■□□□ 1.09
H3F3B-211ENST00000591893 PRPF40AO75400 957 aaKnown RBP21.86■■□□□ 1.09
H3F3B-211ENST00000591893 GSPT1P15170 499 aaKnown RBP21.86■■□□□ 1.09
H3F3B-211ENST00000591893 GPT2Q8TD30 523 aa21.86■■□□□ 1.09
H3F3B-211ENST00000591893 ZNF428Q96B54 188 aa21.86■■□□□ 1.09
H3F3B-211ENST00000591893 CWC22Q9HCG8 908 aaKnown RBP21.86■■□□□ 1.09
H3F3B-211ENST00000591893 RBM27Q9P2N5 1060 aaKnown RBP21.86■■□□□ 1.09
H3F3B-211ENST00000591893 CFAP44Q96MT7 982 aa21.84■■□□□ 1.09
H3F3B-211ENST00000591893 PIK3R4Q99570 1358 aa21.84■■□□□ 1.09
H3F3B-211ENST00000591893 TULP4Q9NRJ4 1543 aa21.84■■□□□ 1.09
H3F3B-211ENST00000591893 LRSAM1Q6UWE0 723 aa21.83■■□□□ 1.09
H3F3B-211ENST00000591893 CCDC39Q9UFE4 941 aa21.83■■□□□ 1.09
H3F3B-211ENST00000591893 ARHGAP45Q92619 1136 aa21.83■■□□□ 1.08
H3F3B-211ENST00000591893 GGNBP2Q9H3C7 697 aa21.83■■□□□ 1.08
H3F3B-211ENST00000591893 PPLO60437 1756 aa21.83■■□□□ 1.08
H3F3B-211ENST00000591893 USP26Q9BXU7 913 aa21.82■■□□□ 1.08
H3F3B-211ENST00000591893 PTCH1Q13635 1447 aa21.82■■□□□ 1.08
H3F3B-211ENST00000591893 SASS6Q6UVJ0 657 aa21.82■■□□□ 1.08
H3F3B-211ENST00000591893 PLEKHM2Q8IWE5 1019 aa21.82■■□□□ 1.08
H3F3B-211ENST00000591893 MRPL50Q8N5N7 158 aaKnown RBP21.82■■□□□ 1.08
H3F3B-211ENST00000591893 CABP2Q9NPB3 220 aa21.82■■□□□ 1.08
H3F3B-211ENST00000591893 SMAP1Q8IYB5 467 aaPredicted RBP21.81■■□□□ 1.08
H3F3B-211ENST00000591893 TMEM63CQ9P1W3 806 aa21.81■■□□□ 1.08
H3F3B-211ENST00000591893 ARAP3Q8WWN8 1544 aa21.8■■□□□ 1.08
H3F3B-211ENST00000591893 ZGPATQ8N5A5 531 aaKnown RBP21.8■■□□□ 1.08
H3F3B-211ENST00000591893 SYCE3A1L190 88 aa21.8■■□□□ 1.08
H3F3B-211ENST00000591893 A0A1W2PP64 1363 aa21.8■■□□□ 1.08
H3F3B-211ENST00000591893 DIAPH1O60610 1272 aaKnown RBP21.79■■□□□ 1.08
H3F3B-211ENST00000591893 ZDHHC9Q9Y397 364 aa21.79■■□□□ 1.08
H3F3B-211ENST00000591893 VAMP4O75379 141 aa21.79■■□□□ 1.08
H3F3B-211ENST00000591893 ST18O60284 1047 aa21.78■■□□□ 1.08
H3F3B-211ENST00000591893 TTC22Q5TAA0 569 aa21.78■■□□□ 1.08
H3F3B-211ENST00000591893 ARID3AQ99856 593 aa21.78■■□□□ 1.08
H3F3B-211ENST00000591893 ABCC4O15439 1325 aa21.77■■□□□ 1.08
H3F3B-211ENST00000591893 CFAP65Q6ZU64 1925 aaKnown RBP21.77■■□□□ 1.08
H3F3B-211ENST00000591893 PLEKHG5O94827 1062 aa21.77■■□□□ 1.08
H3F3B-211ENST00000591893 INTS3Q68E01 1043 aaKnown RBP21.77■■□□□ 1.08
H3F3B-211ENST00000591893 GLI2P10070 1586 aa21.77■■□□□ 1.08
H3F3B-211ENST00000591893 ARHGEF28Q8N1W1 1705 aaKnown RBP21.76■■□□□ 1.07
H3F3B-211ENST00000591893 NSFL1CQ9UNZ2 370 aaKnown RBP21.76■■□□□ 1.07
H3F3B-211ENST00000591893 FAM69CQ0P6D2 419 aa21.75■■□□□ 1.07
H3F3B-211ENST00000591893 TSPYL6Q8N831 410 aa21.74■■□□□ 1.07
H3F3B-211ENST00000591893 CHAMP1Q96JM3 812 aa21.74■■□□□ 1.07
H3F3B-211ENST00000591893 FCHSD2O94868 740 aa21.74■■□□□ 1.07
H3F3B-211ENST00000591893 RNF214Q8ND24 703 aa21.74■■□□□ 1.07
H3F3B-211ENST00000591893 FYB1O15117 783 aa21.73■■□□□ 1.07
H3F3B-211ENST00000591893 MBD3O95983 291 aa21.73■■□□□ 1.07
H3F3B-211ENST00000591893 ANKRD26Q9UPS8 1709 aa21.73■■□□□ 1.07
H3F3B-211ENST00000591893 DCTPP1Q9H773 170 aa21.73■■□□□ 1.07
H3F3B-211ENST00000591893 LMTK2Q8IWU2 1503 aa21.73■■□□□ 1.07
H3F3B-211ENST00000591893 LRRC7Q96NW7 1537 aa21.73■■□□□ 1.07
H3F3B-211ENST00000591893 C16orf71Q8IYS4 520 aaPredicted RBP21.72■■□□□ 1.07
H3F3B-211ENST00000591893 RPGRIP1LQ68CZ1 1315 aa21.72■■□□□ 1.07
H3F3B-211ENST00000591893 PNPLA6Q8IY17 1366 aa21.72■■□□□ 1.07
H3F3B-211ENST00000591893 PTMAP06454 111 aaKnown RBP21.71■■□□□ 1.07
H3F3B-211ENST00000591893 PRKAR2BP31323 418 aa21.71■■□□□ 1.07
H3F3B-211ENST00000591893 KIAA2012Q0VF49 1180 aa21.71■■□□□ 1.07
H3F3B-211ENST00000591893 SAFB2Q14151 953 aaKnown RBP eCLIP21.71■■□□□ 1.07
H3F3B-211ENST00000591893 CASC1Q6TDU7 716 aa21.71■■□□□ 1.07
H3F3B-211ENST00000591893 ELL2O00472 640 aaPredicted RBP21.7■■□□□ 1.07
H3F3B-211ENST00000591893 CCDC94Q9BW85 323 aaPredicted RBP21.7■■□□□ 1.07
H3F3B-211ENST00000591893 KNDC1Q76NI1 1749 aa21.7■■□□□ 1.06
H3F3B-211ENST00000591893 PODXL2Q9NZ53 605 aa21.7■■□□□ 1.06
H3F3B-211ENST00000591893 SRPK2P78362 688 aaKnown RBP21.7■■□□□ 1.06
H3F3B-211ENST00000591893 MLECQ14165 292 aa21.7■■□□□ 1.06
H3F3B-211ENST00000591893 THUMPD2Q9BTF0 503 aaKnown RBP21.7■■□□□ 1.06
H3F3B-211ENST00000591893 FAM135BQ49AJ0 1406 aa21.69■■□□□ 1.06
H3F3B-211ENST00000591893 SDSP20132 328 aa21.69■■□□□ 1.06
H3F3B-211ENST00000591893 API5Q9BZZ5 524 aaKnown RBP21.69■■□□□ 1.06
H3F3B-211ENST00000591893 FOXD4L5Q5VV16 416 aaPredicted RBP21.69■■□□□ 1.06
H3F3B-211ENST00000591893 FOXD4L4Q8WXT5 416 aaPredicted RBP21.69■■□□□ 1.06
H3F3B-211ENST00000591893 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.69■■□□□ 1.06
H3F3B-211ENST00000591893 MYRIPQ8NFW9 859 aa21.68■■□□□ 1.06
H3F3B-211ENST00000591893 TSPY26PQ9H489 355 aa21.68■■□□□ 1.06
H3F3B-211ENST00000591893 PRDM10Q9NQV6 1147 aa21.68■■□□□ 1.06
H3F3B-211ENST00000591893 GNAI1P63096 354 aa21.68■■□□□ 1.06
H3F3B-211ENST00000591893 ABCA9Q8IUA7 1624 aa21.67■■□□□ 1.06
H3F3B-211ENST00000591893 ATAD2Q6PL18 1390 aa21.67■■□□□ 1.06
H3F3B-211ENST00000591893 REC8O95072 547 aa21.67■■□□□ 1.06
H3F3B-211ENST00000591893 OTUD7AQ8TE49 926 aaPredicted RBP21.67■■□□□ 1.06
H3F3B-211ENST00000591893 CDC42BPGQ6DT37 1551 aa21.67■■□□□ 1.06
H3F3B-211ENST00000591893 NFE2L2Q16236 605 aa21.67■■□□□ 1.06
H3F3B-211ENST00000591893 TERF2IPQ9NYB0 399 aa21.67■■□□□ 1.06
H3F3B-211ENST00000591893 TWISTNBQ3B726 338 aaPredicted RBP21.66■■□□□ 1.06
H3F3B-211ENST00000591893 DNTTIP2Q5QJE6 756 aaKnown RBP21.66■■□□□ 1.06
H3F3B-211ENST00000591893 IFT57Q9NWB7 429 aa21.66■■□□□ 1.06
H3F3B-211ENST00000591893 MBIPQ9NS73 344 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms