RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 IL16Q14005 1332 aa13.46□□□□□ -0.26
LINC01140-210ENST00000590653 MBIPQ9NS73 344 aa13.46□□□□□ -0.26
LINC01140-210ENST00000590653 ZFYVE16Q7Z3T8 1539 aa13.46□□□□□ -0.26
LINC01140-210ENST00000590653 VGFO15240 615 aaPredicted RBP13.45□□□□□ -0.26
LINC01140-210ENST00000590653 KRT24Q2M2I5 525 aa13.45□□□□□ -0.26
LINC01140-210ENST00000590653 NSFL1CQ9UNZ2 370 aaKnown RBP13.45□□□□□ -0.26
LINC01140-210ENST00000590653 TET3O43151 1660 aa13.44□□□□□ -0.26
LINC01140-210ENST00000590653 FANCAO15360 1455 aa13.44□□□□□ -0.26
LINC01140-210ENST00000590653 UQCRHLA0A096LP55 91 aa13.44□□□□□ -0.26
LINC01140-210ENST00000590653 UQCRHP07919 91 aa13.44□□□□□ -0.26
LINC01140-210ENST00000590653 HDGFL2Q7Z4V5 671 aaPredicted RBP13.44□□□□□ -0.26
LINC01140-210ENST00000590653 GPT2Q8TD30 523 aa13.44□□□□□ -0.26
LINC01140-210ENST00000590653 FCHSD2O94868 740 aa13.44□□□□□ -0.26
LINC01140-210ENST00000590653 USP26Q9BXU7 913 aa13.44□□□□□ -0.26
LINC01140-210ENST00000590653 CHMP4BQ9H444 224 aaKnown RBP13.44□□□□□ -0.26
LINC01140-210ENST00000590653 EMILIN1Q9Y6C2 1016 aa13.44□□□□□ -0.26
LINC01140-210ENST00000590653 TSHZ3Q63HK5 1081 aa13.43□□□□□ -0.26
LINC01140-210ENST00000590653 ATP7AQ04656 1500 aa13.43□□□□□ -0.26
LINC01140-210ENST00000590653 ST18O60284 1047 aa13.43□□□□□ -0.26
LINC01140-210ENST00000590653 SDSP20132 328 aa13.43□□□□□ -0.26
LINC01140-210ENST00000590653 DNTTIP2Q5QJE6 756 aaKnown RBP13.43□□□□□ -0.26
LINC01140-210ENST00000590653 TTC22Q5TAA0 569 aa13.42□□□□□ -0.26
LINC01140-210ENST00000590653 NFE2L2Q16236 605 aa13.42□□□□□ -0.26
LINC01140-210ENST00000590653 INTS3Q68E01 1043 aaKnown RBP13.42□□□□□ -0.26
LINC01140-210ENST00000590653 TMEM63CQ9P1W3 806 aa13.42□□□□□ -0.26
LINC01140-210ENST00000590653 ADGRL1O94910 1474 aa13.42□□□□□ -0.26
LINC01140-210ENST00000590653 KIF1BO60333 1816 aa13.42□□□□□ -0.26
LINC01140-210ENST00000590653 NEK4P51957 841 aa13.42□□□□□ -0.26
LINC01140-210ENST00000590653 ZNF445P59923 1031 aa13.42□□□□□ -0.26
LINC01140-210ENST00000590653 GNAI1P63096 354 aa13.42□□□□□ -0.26
LINC01140-210ENST00000590653 GDPD2Q9HCC8 539 aa13.42□□□□□ -0.26
LINC01140-210ENST00000590653 NSD2O96028 1365 aa13.42□□□□□ -0.26
LINC01140-210ENST00000590653 CASC1Q6TDU7 716 aa13.41□□□□□ -0.26
LINC01140-210ENST00000590653 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
LINC01140-210ENST00000590653 CDK19Q9BWU1 502 aa13.41□□□□□ -0.26
LINC01140-210ENST00000590653 QRICH2Q9H0J4 1663 aa13.41□□□□□ -0.26
LINC01140-210ENST00000590653 KIAA1210Q9ULL0 1709 aa13.41□□□□□ -0.26
LINC01140-210ENST00000590653 SLC4A10Q6U841 1118 aa13.41□□□□□ -0.26
LINC01140-210ENST00000590653 POLKQ9UBT6 870 aa13.41□□□□□ -0.26
LINC01140-210ENST00000590653 SHROOM2Q13796 1616 aa13.4□□□□□ -0.26
LINC01140-210ENST00000590653 MROH2AA6NES4 1674 aa13.4□□□□□ -0.26
LINC01140-210ENST00000590653 NCBP3Q53F19 620 aaKnown RBP13.4□□□□□ -0.26
LINC01140-210ENST00000590653 PRDM10Q9NQV6 1147 aa13.4□□□□□ -0.26
LINC01140-210ENST00000590653 ZDHHC9Q9Y397 364 aa13.4□□□□□ -0.26
LINC01140-210ENST00000590653 JARID2Q92833 1246 aaPredicted RBP13.4□□□□□ -0.26
LINC01140-210ENST00000590653 API5Q9BZZ5 524 aaKnown RBP13.4□□□□□ -0.26
LINC01140-210ENST00000590653 NOL7Q9UMY1 257 aaKnown RBP13.4□□□□□ -0.26
LINC01140-210ENST00000590653 PLCB2Q00722 1185 aa13.39□□□□□ -0.27
LINC01140-210ENST00000590653 IDI1Q13907 227 aa13.39□□□□□ -0.27
LINC01140-210ENST00000590653 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.39□□□□□ -0.27
LINC01140-210ENST00000590653 RRS1Q15050 365 aaKnown RBP13.39□□□□□ -0.27
LINC01140-210ENST00000590653 TSC1Q92574 1164 aa13.39□□□□□ -0.27
LINC01140-210ENST00000590653 ZNF830Q96NB3 372 aaPredicted RBP13.39□□□□□ -0.27
LINC01140-210ENST00000590653 DCTPP1Q9H773 170 aa13.39□□□□□ -0.27
LINC01140-210ENST00000590653 NPATQ14207 1427 aa13.38□□□□□ -0.27
LINC01140-210ENST00000590653 SOX12O15370 315 aa13.38□□□□□ -0.27
LINC01140-210ENST00000590653 ZCCHC11Q5TAX3 1644 aaKnown RBP13.38□□□□□ -0.27
LINC01140-210ENST00000590653 TULP4Q9NRJ4 1543 aa13.38□□□□□ -0.27
LINC01140-210ENST00000590653 DTNBO60941 627 aa13.38□□□□□ -0.27
LINC01140-210ENST00000590653 ARHGAP45Q92619 1136 aa13.38□□□□□ -0.27
LINC01140-210ENST00000590653 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
LINC01140-210ENST00000590653 ZKSCAN5Q9Y2L8 839 aa13.38□□□□□ -0.27
LINC01140-210ENST00000590653 WAPLQ7Z5K2 1190 aa13.37□□□□□ -0.27
LINC01140-210ENST00000590653 MEIS3Q99687 375 aa13.37□□□□□ -0.27
LINC01140-210ENST00000590653 CLEC17AQ6ZS10 378 aa13.37□□□□□ -0.27
LINC01140-210ENST00000590653 MIS18AQ9NYP9 233 aa13.37□□□□□ -0.27
LINC01140-210ENST00000590653 ABCC4O15439 1325 aa13.36□□□□□ -0.27
LINC01140-210ENST00000590653 FAM177BA6PVY3 158 aa13.36□□□□□ -0.27
LINC01140-210ENST00000590653 ADGRB2O60241 1585 aa13.36□□□□□ -0.27
LINC01140-210ENST00000590653 LRSAM1Q6UWE0 723 aa13.36□□□□□ -0.27
LINC01140-210ENST00000590653 CWC22Q9HCG8 908 aaKnown RBP13.36□□□□□ -0.27
LINC01140-210ENST00000590653 CYP2E1P05181 493 aaPredicted RBP13.36□□□□□ -0.27
LINC01140-210ENST00000590653 NME9Q86XW9 330 aa13.36□□□□□ -0.27
LINC01140-210ENST00000590653 ZNF428Q96B54 188 aa13.36□□□□□ -0.27
LINC01140-210ENST00000590653 UPF3BQ9BZI7 483 aaKnown RBP13.36□□□□□ -0.27
LINC01140-210ENST00000590653 IFT57Q9NWB7 429 aa13.36□□□□□ -0.27
LINC01140-210ENST00000590653 REC8O95072 547 aa13.36□□□□□ -0.27
LINC01140-210ENST00000590653 RILPL2Q969X0 211 aa13.36□□□□□ -0.27
LINC01140-210ENST00000590653 CHD1O14646 1710 aa13.36□□□□□ -0.27
LINC01140-210ENST00000590653 NRXN1Q9ULB1 1477 aa13.35□□□□□ -0.27
LINC01140-210ENST00000590653 RPGRIP1LQ68CZ1 1315 aa13.35□□□□□ -0.27
LINC01140-210ENST00000590653 TMX3Q96JJ7 454 aa13.35□□□□□ -0.27
LINC01140-210ENST00000590653 ADGRB1O14514 1584 aa13.35□□□□□ -0.27
LINC01140-210ENST00000590653 TRIM6-TRIM34B2RNG4 842 aa13.35□□□□□ -0.27
LINC01140-210ENST00000590653 RAPGEF3O95398 923 aa13.35□□□□□ -0.27
LINC01140-210ENST00000590653 C17orf53Q8N3J3 647 aaPredicted RBP13.35□□□□□ -0.27
LINC01140-210ENST00000590653 EXOC6BQ9Y2D4 811 aa13.35□□□□□ -0.27
LINC01140-210ENST00000590653 CFAP74Q9C0B2 1584 aa13.35□□□□□ -0.27
LINC01140-210ENST00000590653 EFCAB6Q5THR3 1501 aa13.35□□□□□ -0.27
LINC01140-210ENST00000590653 F6X3S4 739 aa13.34□□□□□ -0.27
LINC01140-210ENST00000590653 ERC2O15083 957 aa13.34□□□□□ -0.27
LINC01140-210ENST00000590653 MCM10Q7L590 875 aa13.34□□□□□ -0.27
LINC01140-210ENST00000590653 LARP6Q9BRS8 491 aaKnown RBP13.34□□□□□ -0.27
LINC01140-210ENST00000590653 ANO2Q9NQ90 1003 aa13.34□□□□□ -0.27
LINC01140-210ENST00000590653 IBTKQ9P2D0 1353 aaPredicted RBP13.34□□□□□ -0.27
LINC01140-210ENST00000590653 PDLIM2Q96JY6 352 aa13.34□□□□□ -0.27
LINC01140-210ENST00000590653 CFAP44Q96MT7 982 aa13.34□□□□□ -0.27
LINC01140-210ENST00000590653 CCDC39Q9UFE4 941 aa13.34□□□□□ -0.27
LINC01140-210ENST00000590653 ZNF500O60304 480 aaPredicted RBP13.34□□□□□ -0.27
LINC01140-210ENST00000590653 CEP85Q6P2H3 762 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms