RNA–Protein interactions for RNA: ENST00000590278.1

LRP3-203, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 3,278 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-203ENST00000590278 NME9Q86XW9 330 aa18.22■□□□□ 0.51
LRP3-203ENST00000590278 ERBB4Q15303 1308 aa18.21■□□□□ 0.51
LRP3-203ENST00000590278 KRT24Q2M2I5 525 aa18.21■□□□□ 0.51
LRP3-203ENST00000590278 PPLO60437 1756 aa18.21■□□□□ 0.5
LRP3-203ENST00000590278 CALD1Q05682 793 aaKnown RBP18.2■□□□□ 0.5
LRP3-203ENST00000590278 CIZ1Q9ULV3 898 aaPredicted RBP18.2■□□□□ 0.5
LRP3-203ENST00000590278 SMARCA5O60264 1052 aaPredicted RBP18.2■□□□□ 0.5
LRP3-203ENST00000590278 ADGRB2O60241 1585 aa18.2■□□□□ 0.5
LRP3-203ENST00000590278 SKOR2Q2VWA4 1001 aaPredicted RBP18.2■□□□□ 0.5
LRP3-203ENST00000590278 OTUD7AQ8TE49 926 aaPredicted RBP18.19■□□□□ 0.5
LRP3-203ENST00000590278 NUTM2FA1L443 756 aa18.19■□□□□ 0.5
LRP3-203ENST00000590278 MLECQ14165 292 aa18.19■□□□□ 0.5
LRP3-203ENST00000590278 NCKAP5LQ9HCH0 1330 aa18.19■□□□□ 0.5
LRP3-203ENST00000590278 NASPP49321 788 aaPredicted RBP18.18■□□□□ 0.5
LRP3-203ENST00000590278 GSPT1P15170 499 aaKnown RBP18.18■□□□□ 0.5
LRP3-203ENST00000590278 SLC52A1Q9NWF4 448 aa18.18■□□□□ 0.5
LRP3-203ENST00000590278 CAVIN1Q6NZI2 390 aaKnown RBP18.18■□□□□ 0.5
LRP3-203ENST00000590278 CAMSAP1Q5T5Y3 1602 aa18.17■□□□□ 0.5
LRP3-203ENST00000590278 DDIT3P35638 169 aa18.17■□□□□ 0.5
LRP3-203ENST00000590278 LMTK2Q8IWU2 1503 aa18.17■□□□□ 0.5
LRP3-203ENST00000590278 API5Q9BZZ5 524 aaKnown RBP18.17■□□□□ 0.5
LRP3-203ENST00000590278 ZC3H13Q5T200 1668 aaKnown RBP18.17■□□□□ 0.5
LRP3-203ENST00000590278 POGZQ7Z3K3 1410 aa18.17■□□□□ 0.5
LRP3-203ENST00000590278 HSP90AA2PQ14568 343 aaPredicted RBP18.17■□□□□ 0.5
LRP3-203ENST00000590278 TPRNQ4KMQ1 711 aa18.17■□□□□ 0.5
LRP3-203ENST00000590278 NOL8Q76FK4 1167 aaKnown RBP18.17■□□□□ 0.5
LRP3-203ENST00000590278 ABCC3O15438 1527 aa18.16■□□□□ 0.5
LRP3-203ENST00000590278 SLC4A10Q6U841 1118 aa18.16■□□□□ 0.5
LRP3-203ENST00000590278 BAG4O95429 457 aaKnown RBP18.16■□□□□ 0.5
LRP3-203ENST00000590278 IFT57Q9NWB7 429 aa18.16■□□□□ 0.5
LRP3-203ENST00000590278 COL3A1P02461 1466 aaPredicted RBP18.16■□□□□ 0.5
LRP3-203ENST00000590278 PKP1Q13835 747 aa18.15■□□□□ 0.5
LRP3-203ENST00000590278 YTHDC2Q9H6S0 1430 aaKnown RBP18.15■□□□□ 0.5
LRP3-203ENST00000590278 PLEKHM2Q8IWE5 1019 aa18.15■□□□□ 0.5
LRP3-203ENST00000590278 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
LRP3-203ENST00000590278 USP32Q8NFA0 1604 aa18.14■□□□□ 0.5
LRP3-203ENST00000590278 ARHGEF28Q8N1W1 1705 aaKnown RBP18.14■□□□□ 0.49
LRP3-203ENST00000590278 CHAMP1Q96JM3 812 aa18.14■□□□□ 0.49
LRP3-203ENST00000590278 COG3Q96JB2 828 aa18.14■□□□□ 0.49
LRP3-203ENST00000590278 LRRC7Q96NW7 1537 aa18.14■□□□□ 0.49
LRP3-203ENST00000590278 FOXD4L6Q3SYB3 417 aaPredicted RBP18.13■□□□□ 0.49
LRP3-203ENST00000590278 FOXD4L3Q6VB84 417 aaPredicted RBP18.13■□□□□ 0.49
LRP3-203ENST00000590278 ARHGAP45Q92619 1136 aa18.13■□□□□ 0.49
LRP3-203ENST00000590278 NCOA3Q9Y6Q9 1424 aa18.13■□□□□ 0.49
LRP3-203ENST00000590278 CASC1Q6TDU7 716 aa18.13■□□□□ 0.49
LRP3-203ENST00000590278 MCM10Q7L590 875 aa18.13■□□□□ 0.49
LRP3-203ENST00000590278 MIS18AQ9NYP9 233 aa18.13■□□□□ 0.49
LRP3-203ENST00000590278 CFAP44Q96MT7 982 aa18.12■□□□□ 0.49
LRP3-203ENST00000590278 ISY1Q9ULR0 285 aaKnown RBP18.12■□□□□ 0.49
LRP3-203ENST00000590278 NEXMIFQ5QGS0 1516 aa18.12■□□□□ 0.49
LRP3-203ENST00000590278 TXNDC2Q86VQ3 553 aa18.12■□□□□ 0.49
LRP3-203ENST00000590278 AEBP1Q8IUX7 1158 aa18.12■□□□□ 0.49
LRP3-203ENST00000590278 ZBTB7CA1YPR0 619 aa18.11■□□□□ 0.49
LRP3-203ENST00000590278 PRPF40AO75400 957 aaKnown RBP18.11■□□□□ 0.49
LRP3-203ENST00000590278 MSNP26038 577 aaKnown RBP18.11■□□□□ 0.49
LRP3-203ENST00000590278 RABEP1Q15276 862 aa18.11■□□□□ 0.49
LRP3-203ENST00000590278 ZGPATQ8N5A5 531 aaKnown RBP18.11■□□□□ 0.49
LRP3-203ENST00000590278 FRMPD1Q5SYB0 1578 aa18.11■□□□□ 0.49
LRP3-203ENST00000590278 PTMSP20962 102 aa18.11■□□□□ 0.49
LRP3-203ENST00000590278 LMOD3Q0VAK6 560 aa18.11■□□□□ 0.49
LRP3-203ENST00000590278 TTC22Q5TAA0 569 aa18.11■□□□□ 0.49
LRP3-203ENST00000590278 INTS3Q68E01 1043 aaKnown RBP18.11■□□□□ 0.49
LRP3-203ENST00000590278 SULT6B1Q6IMI4 303 aa18.11■□□□□ 0.49
LRP3-203ENST00000590278 TSHZ3Q63HK5 1081 aa18.11■□□□□ 0.49
LRP3-203ENST00000590278 ABCC4O15439 1325 aa18.11■□□□□ 0.49
LRP3-203ENST00000590278 IL13P35225 146 aa18.1■□□□□ 0.49
LRP3-203ENST00000590278 FAM135BQ49AJ0 1406 aa18.1■□□□□ 0.49
LRP3-203ENST00000590278 CD163L1Q9NR16 1453 aa18.1■□□□□ 0.49
LRP3-203ENST00000590278 PNPLA6Q8IY17 1366 aa18.1■□□□□ 0.49
LRP3-203ENST00000590278 AK9Q5TCS8 1911 aa18.1■□□□□ 0.49
LRP3-203ENST00000590278 SDSP20132 328 aa18.1■□□□□ 0.49
LRP3-203ENST00000590278 GLIPR1L2Q4G1C9 344 aa18.1■□□□□ 0.49
LRP3-203ENST00000590278 RBM27Q9P2N5 1060 aaKnown RBP18.1■□□□□ 0.49
LRP3-203ENST00000590278 ST18O60284 1047 aa18.09■□□□□ 0.49
LRP3-203ENST00000590278 VSIG10Q8N0Z9 540 aa18.09■□□□□ 0.49
LRP3-203ENST00000590278 MEIS3Q99687 375 aa18.09■□□□□ 0.49
LRP3-203ENST00000590278 KLHL40Q2TBA0 621 aa18.08■□□□□ 0.48
LRP3-203ENST00000590278 DCTPP1Q9H773 170 aa18.08■□□□□ 0.48
LRP3-203ENST00000590278 MLH3Q9UHC1 1453 aa18.08■□□□□ 0.48
LRP3-203ENST00000590278 CCDC173Q0VFZ6 552 aa18.08■□□□□ 0.48
LRP3-203ENST00000590278 ZFYVE9O95405 1425 aa18.08■□□□□ 0.48
LRP3-203ENST00000590278 PTPRMP28827 1452 aa18.07■□□□□ 0.48
LRP3-203ENST00000590278 NUCB2P80303 420 aa18.07■□□□□ 0.48
LRP3-203ENST00000590278 NECTIN2Q92692 538 aa18.07■□□□□ 0.48
LRP3-203ENST00000590278 USP26Q9BXU7 913 aa18.07■□□□□ 0.48
LRP3-203ENST00000590278 HECW2Q9P2P5 1572 aa18.07■□□□□ 0.48
LRP3-203ENST00000590278 F6X3S4 739 aa18.06■□□□□ 0.48
LRP3-203ENST00000590278 SLC4A2P04920 1241 aa18.06■□□□□ 0.48
LRP3-203ENST00000590278 SIGLEC1Q9BZZ2 1709 aa18.06■□□□□ 0.48
LRP3-203ENST00000590278 BRPF1P55201 1214 aaPredicted RBP18.06■□□□□ 0.48
LRP3-203ENST00000590278 KIAA1211Q6ZU35 1233 aa18.05■□□□□ 0.48
LRP3-203ENST00000590278 RNF214Q8ND24 703 aa18.05■□□□□ 0.48
LRP3-203ENST00000590278 CFAP74Q9C0B2 1584 aa18.05■□□□□ 0.48
LRP3-203ENST00000590278 ZNF853P0CG23 659 aa18.05■□□□□ 0.48
LRP3-203ENST00000590278 MED14O60244 1454 aa18.05■□□□□ 0.48
LRP3-203ENST00000590278 PTCH1Q13635 1447 aa18.05■□□□□ 0.48
LRP3-203ENST00000590278 YEATS2Q9ULM3 1422 aa18.05■□□□□ 0.48
LRP3-203ENST00000590278 NEK4P51957 841 aa18.04■□□□□ 0.48
LRP3-203ENST00000590278 ZSCAN23Q3MJ62 389 aa18.04■□□□□ 0.48
LRP3-203ENST00000590278 CEP85Q6P2H3 762 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms