RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 CALD1Q05682 793 aaKnown RBP26.23■■□□□ 1.79
ZNF554-203ENST00000590116 CPSF1Q10570 1443 aaKnown RBP26.22■■□□□ 1.79
ZNF554-203ENST00000590116 CPS1P31327 1500 aa26.22■■□□□ 1.79
ZNF554-203ENST00000590116 NRXN3Q9Y4C0 1643 aa26.22■■□□□ 1.79
ZNF554-203ENST00000590116 ZBTB7BO15156 539 aaPredicted RBP26.22■■□□□ 1.79
ZNF554-203ENST00000590116 DCTN1Q14203 1278 aa26.22■■□□□ 1.79
ZNF554-203ENST00000590116 DLG5Q8TDM6 1919 aa26.21■■□□□ 1.79
ZNF554-203ENST00000590116 GNAI1P63096 354 aa26.21■■□□□ 1.79
ZNF554-203ENST00000590116 SPATA31D1Q6ZQQ2 1576 aa26.21■■□□□ 1.79
ZNF554-203ENST00000590116 IFT57Q9NWB7 429 aa26.21■■□□□ 1.79
ZNF554-203ENST00000590116 ANKRD45Q5TZF3 282 aa26.2■■□□□ 1.78
ZNF554-203ENST00000590116 PPP6R1Q9UPN7 881 aa26.2■■□□□ 1.78
ZNF554-203ENST00000590116 ARXQ96QS3 562 aa26.2■■□□□ 1.78
ZNF554-203ENST00000590116 C8orf58Q8NAV2 365 aa26.19■■□□□ 1.78
ZNF554-203ENST00000590116 NUDT16Q96DE0 195 aaKnown RBP26.19■■□□□ 1.78
ZNF554-203ENST00000590116 CDK12Q9NYV4 1490 aaPredicted RBP26.19■■□□□ 1.78
ZNF554-203ENST00000590116 DIP2BQ9P265 1576 aa26.19■■□□□ 1.78
ZNF554-203ENST00000590116 AGLP35573 1532 aa26.18■■□□□ 1.78
ZNF554-203ENST00000590116 PTCH1Q13635 1447 aa26.18■■□□□ 1.78
ZNF554-203ENST00000590116 TWISTNBQ3B726 338 aaPredicted RBP26.17■■□□□ 1.78
ZNF554-203ENST00000590116 ARHGAP45Q92619 1136 aa26.17■■□□□ 1.78
ZNF554-203ENST00000590116 ZNF853P0CG23 659 aa26.16■■□□□ 1.78
ZNF554-203ENST00000590116 SIRT2Q8IXJ6 389 aa26.16■■□□□ 1.78
ZNF554-203ENST00000590116 COG3Q96JB2 828 aa26.16■■□□□ 1.78
ZNF554-203ENST00000590116 REREQ9P2R6 1566 aa26.16■■□□□ 1.78
ZNF554-203ENST00000590116 HSCBQ8IWL3 235 aa26.15■■□□□ 1.78
ZNF554-203ENST00000590116 AATKQ6ZMQ8 1374 aa26.14■■□□□ 1.78
ZNF554-203ENST00000590116 PIK3R4Q99570 1358 aa26.14■■□□□ 1.78
ZNF554-203ENST00000590116 CHMP4BQ9H444 224 aaKnown RBP26.14■■□□□ 1.77
ZNF554-203ENST00000590116 ANO8Q9HCE9 1232 aaPredicted RBP26.14■■□□□ 1.77
ZNF554-203ENST00000590116 ABCC4O15439 1325 aa26.13■■□□□ 1.77
ZNF554-203ENST00000590116 GCC1Q96CN9 775 aa26.13■■□□□ 1.77
ZNF554-203ENST00000590116 CFAP44Q96MT7 982 aa26.13■■□□□ 1.77
ZNF554-203ENST00000590116 GZF1Q9H116 711 aaPredicted RBP26.13■■□□□ 1.77
ZNF554-203ENST00000590116 CHMP5Q9NZZ3 219 aa26.13■■□□□ 1.77
ZNF554-203ENST00000590116 MCM4P33991 863 aa26.12■■□□□ 1.77
ZNF554-203ENST00000590116 BMP2KLQ5H9B9 411 aa26.12■■□□□ 1.77
ZNF554-203ENST00000590116 AEBP1Q8IUX7 1158 aa26.12■■□□□ 1.77
ZNF554-203ENST00000590116 CCDC61Q9Y6R9 512 aa26.12■■□□□ 1.77
ZNF554-203ENST00000590116 MON2Q7Z3U7 1717 aa26.12■■□□□ 1.77
ZNF554-203ENST00000590116 RBM25P49756 843 aaKnown RBP26.12■■□□□ 1.77
ZNF554-203ENST00000590116 LMOD3Q0VAK6 560 aa26.12■■□□□ 1.77
ZNF554-203ENST00000590116 PRR36Q9H6K5 1346 aa26.11■■□□□ 1.77
ZNF554-203ENST00000590116 KRT24Q2M2I5 525 aa26.1■■□□□ 1.77
ZNF554-203ENST00000590116 NUTM2FA1L443 756 aa26.1■■□□□ 1.77
ZNF554-203ENST00000590116 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.1■■□□□ 1.77
ZNF554-203ENST00000590116 ZNF692Q9BU19 519 aaPredicted RBP26.08■■□□□ 1.77
ZNF554-203ENST00000590116 KNDC1Q76NI1 1749 aa26.07■■□□□ 1.76
ZNF554-203ENST00000590116 C3P01024 1663 aa26.07■■□□□ 1.76
ZNF554-203ENST00000590116 ITSN1Q15811 1721 aa26.07■■□□□ 1.76
ZNF554-203ENST00000590116 TBC1D9Q6ZT07 1266 aa26.06■■□□□ 1.76
ZNF554-203ENST00000590116 AKAP12Q02952 1782 aa26.06■■□□□ 1.76
ZNF554-203ENST00000590116 API5Q9BZZ5 524 aaKnown RBP26.06■■□□□ 1.76
ZNF554-203ENST00000590116 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.06■■□□□ 1.76
ZNF554-203ENST00000590116 SULT6B1Q6IMI4 303 aa26.05■■□□□ 1.76
ZNF554-203ENST00000590116 SOX12O15370 315 aa26.04■■□□□ 1.76
ZNF554-203ENST00000590116 CD2BP2O95400 341 aaKnown RBP26.04■■□□□ 1.76
ZNF554-203ENST00000590116 KIF2CQ99661 725 aa26.04■■□□□ 1.76
ZNF554-203ENST00000590116 EIF4A2Q14240 407 aaKnown RBP26.04■■□□□ 1.76
ZNF554-203ENST00000590116 FOXD4L1Q9NU39 408 aa26.04■■□□□ 1.76
ZNF554-203ENST00000590116 ESF1Q9H501 851 aaKnown RBP26.03■■□□□ 1.76
ZNF554-203ENST00000590116 NCOA3Q9Y6Q9 1424 aa26.03■■□□□ 1.76
ZNF554-203ENST00000590116 L1TD1Q5T7N2 865 aaKnown RBP26.03■■□□□ 1.76
ZNF554-203ENST00000590116 MCM10Q7L590 875 aa26.03■■□□□ 1.76
ZNF554-203ENST00000590116 SNX21Q969T3 373 aa26.03■■□□□ 1.76
ZNF554-203ENST00000590116 RBM42Q9BTD8 480 aaKnown RBP26.02■■□□□ 1.76
ZNF554-203ENST00000590116 ROBO2Q9HCK4 1378 aa26.02■■□□□ 1.76
ZNF554-203ENST00000590116 HSP90AB1P08238 724 aaKnown RBP26.01■■□□□ 1.75
ZNF554-203ENST00000590116 TECPR2O15040 1411 aa26.01■■□□□ 1.75
ZNF554-203ENST00000590116 TRAK2O60296 914 aa26■■□□□ 1.75
ZNF554-203ENST00000590116 GSPT1P15170 499 aaKnown RBP25.99■■□□□ 1.75
ZNF554-203ENST00000590116 DDIT3P35638 169 aa25.99■■□□□ 1.75
ZNF554-203ENST00000590116 SIRT1Q96EB6 747 aa25.99■■□□□ 1.75
ZNF554-203ENST00000590116 NRKQ7Z2Y5 1582 aa25.99■■□□□ 1.75
ZNF554-203ENST00000590116 HDGFP51858 240 aaKnown RBP25.97■■□□□ 1.75
ZNF554-203ENST00000590116 C16orf71Q8IYS4 520 aaPredicted RBP25.97■■□□□ 1.75
ZNF554-203ENST00000590116 HSP90AB2PQ58FF8 381 aa25.97■■□□□ 1.75
ZNF554-203ENST00000590116 TTC21BQ7Z4L5 1316 aa25.97■■□□□ 1.75
ZNF554-203ENST00000590116 ACEP12821 1306 aa25.96■■□□□ 1.75
ZNF554-203ENST00000590116 GOLGA6L3A6NEY3 463 aa25.95■■□□□ 1.75
ZNF554-203ENST00000590116 PANK2Q9BZ23 570 aa25.95■■□□□ 1.75
ZNF554-203ENST00000590116 RGS12O14924 1447 aa25.95■■□□□ 1.74
ZNF554-203ENST00000590116 APBB1O00213 710 aa25.95■■□□□ 1.74
ZNF554-203ENST00000590116 XRCC6P12956 609 aaKnown RBP eCLIP25.95■■□□□ 1.74
ZNF554-203ENST00000590116 OTUD7AQ8TE49 926 aaPredicted RBP25.95■■□□□ 1.74
ZNF554-203ENST00000590116 PLEKHM2Q8IWE5 1019 aa25.94■■□□□ 1.74
ZNF554-203ENST00000590116 TNPO1Q92973 898 aaKnown RBP25.94■■□□□ 1.74
ZNF554-203ENST00000590116 PEAK1Q9H792 1746 aa25.94■■□□□ 1.74
ZNF554-203ENST00000590116 FAM43AQ8N2R8 423 aa25.94■■□□□ 1.74
ZNF554-203ENST00000590116 MIS18AQ9NYP9 233 aa25.94■■□□□ 1.74
ZNF554-203ENST00000590116 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.94■■□□□ 1.74
ZNF554-203ENST00000590116 MSH6P52701 1360 aa25.93■■□□□ 1.74
ZNF554-203ENST00000590116 KIF24Q5T7B8 1368 aa25.93■■□□□ 1.74
ZNF554-203ENST00000590116 DDX11L8A8MPP1 907 aa25.93■■□□□ 1.74
ZNF554-203ENST00000590116 CDC45O75419 566 aa25.93■■□□□ 1.74
ZNF554-203ENST00000590116 INTS3Q68E01 1043 aaKnown RBP25.93■■□□□ 1.74
ZNF554-203ENST00000590116 ATP10DQ9P241 1426 aa25.93■■□□□ 1.74
ZNF554-203ENST00000590116 TNRQ92752 1358 aa25.92■■□□□ 1.74
ZNF554-203ENST00000590116 DCTPP1Q9H773 170 aa25.92■■□□□ 1.74
ZNF554-203ENST00000590116 FSD2A1L4K1 749 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms