RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 GNAI1P63096 354 aa24.45■■□□□ 1.5
PRKCSH-209ENST00000589838 THEMISQ8N1K5 641 aaPredicted RBP24.45■■□□□ 1.5
PRKCSH-209ENST00000589838 TRIM27P14373 513 aa24.44■■□□□ 1.5
PRKCSH-209ENST00000589838 PHACTR3Q96KR7 559 aa24.44■■□□□ 1.5
PRKCSH-209ENST00000589838 DIP2AQ14689 1571 aa24.44■■□□□ 1.5
PRKCSH-209ENST00000589838 ACEP12821 1306 aa24.43■■□□□ 1.5
PRKCSH-209ENST00000589838 IFT57Q9NWB7 429 aa24.43■■□□□ 1.5
PRKCSH-209ENST00000589838 NOB1Q9ULX3 412 aaKnown RBP24.43■■□□□ 1.5
PRKCSH-209ENST00000589838 BRPF1P55201 1214 aaPredicted RBP24.43■■□□□ 1.5
PRKCSH-209ENST00000589838 RRS1Q15050 365 aaKnown RBP24.42■■□□□ 1.5
PRKCSH-209ENST00000589838 SLC26A8Q96RN1 970 aa24.42■■□□□ 1.5
PRKCSH-209ENST00000589838 PTPRUQ92729 1446 aa24.42■■□□□ 1.5
PRKCSH-209ENST00000589838 PTCH1Q13635 1447 aa24.41■■□□□ 1.5
PRKCSH-209ENST00000589838 AMOTL2Q9Y2J4 779 aa24.41■■□□□ 1.5
PRKCSH-209ENST00000589838 USP6P35125 1406 aa24.4■■□□□ 1.5
PRKCSH-209ENST00000589838 LAS1LQ9Y4W2 734 aaKnown RBP24.4■■□□□ 1.5
PRKCSH-209ENST00000589838 DLG5Q8TDM6 1919 aa24.39■■□□□ 1.49
PRKCSH-209ENST00000589838 OVOS2A0A0J9YW53 1432 aa24.39■■□□□ 1.49
PRKCSH-209ENST00000589838 OVOS2Q6IE36 1432 aa24.39■■□□□ 1.49
PRKCSH-209ENST00000589838 ITPRIPQ8IWB1 547 aa24.38■■□□□ 1.49
PRKCSH-209ENST00000589838 PDZRN3Q9UPQ7 1066 aa24.38■■□□□ 1.49
PRKCSH-209ENST00000589838 TTC21AQ8NDW8 1320 aa24.37■■□□□ 1.49
PRKCSH-209ENST00000589838 NALCNQ8IZF0 1738 aa24.37■■□□□ 1.49
PRKCSH-209ENST00000589838 CHMP4BQ9H444 224 aaKnown RBP24.37■■□□□ 1.49
PRKCSH-209ENST00000589838 DAXXQ9UER7 740 aaPredicted RBP24.37■■□□□ 1.49
PRKCSH-209ENST00000589838 ZNF853P0CG23 659 aa24.36■■□□□ 1.49
PRKCSH-209ENST00000589838 HDAC1Q13547 482 aaPredicted RBP24.36■■□□□ 1.49
PRKCSH-209ENST00000589838 USP31Q70CQ4 1352 aa24.35■■□□□ 1.49
PRKCSH-209ENST00000589838 ARHGAP45Q92619 1136 aa24.35■■□□□ 1.49
PRKCSH-209ENST00000589838 CFAP44Q96MT7 982 aa24.34■■□□□ 1.49
PRKCSH-209ENST00000589838 VAMP4O75379 141 aa24.34■■□□□ 1.49
PRKCSH-209ENST00000589838 NBR1Q14596 966 aa24.33■■□□□ 1.49
PRKCSH-209ENST00000589838 TMEM57Q8N5G2 664 aa24.33■■□□□ 1.49
PRKCSH-209ENST00000589838 SSH2Q76I76 1423 aa24.32■■□□□ 1.48
PRKCSH-209ENST00000589838 EIF4A2Q14240 407 aaKnown RBP24.32■■□□□ 1.48
PRKCSH-209ENST00000589838 RTL5Q5HYW3 569 aaPredicted RBP24.32■■□□□ 1.48
PRKCSH-209ENST00000589838 RIMS1Q86UR5 1692 aaKnown RBP24.32■■□□□ 1.48
PRKCSH-209ENST00000589838 NUTM2FA1L443 756 aa24.31■■□□□ 1.48
PRKCSH-209ENST00000589838 THUMPD2Q9BTF0 503 aaKnown RBP24.31■■□□□ 1.48
PRKCSH-209ENST00000589838 MBIPQ9NS73 344 aa24.31■■□□□ 1.48
PRKCSH-209ENST00000589838 ZBTB40Q9NUA8 1239 aa24.31■■□□□ 1.48
PRKCSH-209ENST00000589838 MRPL50Q8N5N7 158 aaKnown RBP24.3■■□□□ 1.48
PRKCSH-209ENST00000589838 PIK3R4Q99570 1358 aa24.29■■□□□ 1.48
PRKCSH-209ENST00000589838 XRN1Q8IZH2 1706 aaKnown RBP24.29■■□□□ 1.48
PRKCSH-209ENST00000589838 PLPPR3Q6T4P5 718 aa24.29■■□□□ 1.48
PRKCSH-209ENST00000589838 HAP1P54257 671 aaPredicted RBP24.28■■□□□ 1.48
PRKCSH-209ENST00000589838 SULT6B1Q6IMI4 303 aa24.28■■□□□ 1.48
PRKCSH-209ENST00000589838 TWISTNBQ3B726 338 aaPredicted RBP24.27■■□□□ 1.48
PRKCSH-209ENST00000589838 NGDNQ8NEJ9 315 aaKnown RBP24.27■■□□□ 1.48
PRKCSH-209ENST00000589838 ANKARQ7Z5J8 1434 aa24.26■■□□□ 1.47
PRKCSH-209ENST00000589838 RGPD1P0DJD0 1748 aa24.26■■□□□ 1.47
PRKCSH-209ENST00000589838 PEAK1Q9H792 1746 aa24.26■■□□□ 1.47
PRKCSH-209ENST00000589838 SMC5Q8IY18 1101 aa24.26■■□□□ 1.47
PRKCSH-209ENST00000589838 UPF2Q9HAU5 1272 aaKnown RBP24.26■■□□□ 1.47
PRKCSH-209ENST00000589838 USP35Q9P2H5 1018 aa24.26■■□□□ 1.47
PRKCSH-209ENST00000589838 TSPYL6Q8N831 410 aa24.24■■□□□ 1.47
PRKCSH-209ENST00000589838 RGPD8O14715 1765 aaPredicted RBP24.24■■□□□ 1.47
PRKCSH-209ENST00000589838 FMN2Q9NZ56 1722 aa24.24■■□□□ 1.47
PRKCSH-209ENST00000589838 ARHGEF10O15013 1369 aa24.23■■□□□ 1.47
PRKCSH-209ENST00000589838 API5Q9BZZ5 524 aaKnown RBP24.23■■□□□ 1.47
PRKCSH-209ENST00000589838 SBNO1A3KN83 1393 aa24.23■■□□□ 1.47
PRKCSH-209ENST00000589838 HSP90AB2PQ58FF8 381 aa24.22■■□□□ 1.47
PRKCSH-209ENST00000589838 AEBP1Q8IUX7 1158 aa24.22■■□□□ 1.47
PRKCSH-209ENST00000589838 CEP170BQ9Y4F5 1589 aaPredicted RBP24.22■■□□□ 1.47
PRKCSH-209ENST00000589838 FLT4P35916 1363 aa24.21■■□□□ 1.47
PRKCSH-209ENST00000589838 FAM83GA6ND36 823 aa24.21■■□□□ 1.47
PRKCSH-209ENST00000589838 TRHP20396 242 aaPredicted RBP24.2■■□□□ 1.46
PRKCSH-209ENST00000589838 C8orf58Q8NAV2 365 aa24.2■■□□□ 1.46
PRKCSH-209ENST00000589838 USP19O94966 1318 aa24.2■■□□□ 1.46
PRKCSH-209ENST00000589838 ABCC4O15439 1325 aa24.19■■□□□ 1.46
PRKCSH-209ENST00000589838 MAP3K19Q56UN5 1328 aa24.19■■□□□ 1.46
PRKCSH-209ENST00000589838 ELL2O00472 640 aaPredicted RBP24.19■■□□□ 1.46
PRKCSH-209ENST00000589838 ZBTB7BO15156 539 aaPredicted RBP24.19■■□□□ 1.46
PRKCSH-209ENST00000589838 KIF24Q5T7B8 1368 aa24.18■■□□□ 1.46
PRKCSH-209ENST00000589838 DCTN1Q14203 1278 aa24.18■■□□□ 1.46
PRKCSH-209ENST00000589838 CHL1O00533 1208 aa24.17■■□□□ 1.46
PRKCSH-209ENST00000589838 KIAA0232Q92628 1395 aa24.17■■□□□ 1.46
PRKCSH-209ENST00000589838 SEC24BO95487 1268 aa24.16■■□□□ 1.46
PRKCSH-209ENST00000589838 KCNA6P17658 529 aa24.16■■□□□ 1.46
PRKCSH-209ENST00000589838 AMPHP49418 695 aa24.16■■□□□ 1.46
PRKCSH-209ENST00000589838 BECN1Q14457 450 aa24.16■■□□□ 1.46
PRKCSH-209ENST00000589838 PIK3C2AO00443 1686 aa24.16■■□□□ 1.46
PRKCSH-209ENST00000589838 NUCB1Q02818 461 aa24.15■■□□□ 1.46
PRKCSH-209ENST00000589838 GCC1Q96CN9 775 aa24.15■■□□□ 1.46
PRKCSH-209ENST00000589838 USP54Q70EL1 1684 aa24.14■■□□□ 1.46
PRKCSH-209ENST00000589838 SOX12O15370 315 aa24.14■■□□□ 1.45
PRKCSH-209ENST00000589838 SLC4A3P48751 1232 aa24.13■■□□□ 1.45
PRKCSH-209ENST00000589838 ANKLE2Q86XL3 938 aa24.13■■□□□ 1.45
PRKCSH-209ENST00000589838 NLRP6P59044 892 aa24.13■■□□□ 1.45
PRKCSH-209ENST00000589838 KDRP35968 1356 aa24.12■■□□□ 1.45
PRKCSH-209ENST00000589838 DEKP35659 375 aaKnown RBP24.12■■□□□ 1.45
PRKCSH-209ENST00000589838 RTF1Q92541 710 aaKnown RBP24.12■■□□□ 1.45
PRKCSH-209ENST00000589838 CHD2O14647 1828 aaKnown RBP24.11■■□□□ 1.45
PRKCSH-209ENST00000589838 TBC1D32Q96NH3 1257 aa24.11■■□□□ 1.45
PRKCSH-209ENST00000589838 MCM10Q7L590 875 aa24.11■■□□□ 1.45
PRKCSH-209ENST00000589838 GAS2L2Q8NHY3 880 aa24.11■■□□□ 1.45
PRKCSH-209ENST00000589838 IGSF1Q8N6C5 1336 aa24.1■■□□□ 1.45
PRKCSH-209ENST00000589838 CHD1LQ86WJ1 897 aa24.1■■□□□ 1.45
PRKCSH-209ENST00000589838 ZNF142P52746 1687 aaPredicted RBP24.09■■□□□ 1.45
PRKCSH-209ENST00000589838 CRB1P82279 1406 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms