RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 ZKSCAN2Q63HK3 967 aa14□□□□□ -0.17
GFAP-216ENST00000589701 ABCF1Q8NE71 845 aaKnown RBP eCLIP14□□□□□ -0.17
GFAP-216ENST00000589701 NINLQ9Y2I6 1382 aa14□□□□□ -0.17
GFAP-216ENST00000589701 CPS1P31327 1500 aa14□□□□□ -0.17
GFAP-216ENST00000589701 PDZRN3Q9UPQ7 1066 aa14□□□□□ -0.17
GFAP-216ENST00000589701 CCDC61Q9Y6R9 512 aa14□□□□□ -0.17
GFAP-216ENST00000589701 ZNF335Q9H4Z2 1342 aaPredicted RBP14□□□□□ -0.17
GFAP-216ENST00000589701 MVPQ14764 893 aaKnown RBP13.99□□□□□ -0.17
GFAP-216ENST00000589701 ANKLE2Q86XL3 938 aa13.99□□□□□ -0.17
GFAP-216ENST00000589701 TMEM57Q8N5G2 664 aa13.99□□□□□ -0.17
GFAP-216ENST00000589701 LRRC7Q96NW7 1537 aa13.99□□□□□ -0.17
GFAP-216ENST00000589701 C1orf115Q9H7X2 142 aa13.99□□□□□ -0.17
GFAP-216ENST00000589701 SETD1AO15047 1707 aaKnown RBP13.99□□□□□ -0.17
GFAP-216ENST00000589701 KRT24Q2M2I5 525 aa13.98□□□□□ -0.17
GFAP-216ENST00000589701 NUTM2GQ5VZR2 741 aa13.98□□□□□ -0.17
GFAP-216ENST00000589701 COG3Q96JB2 828 aa13.98□□□□□ -0.17
GFAP-216ENST00000589701 NEFMP07197 916 aa13.98□□□□□ -0.17
GFAP-216ENST00000589701 RTL5Q5HYW3 569 aaPredicted RBP13.98□□□□□ -0.17
GFAP-216ENST00000589701 PAXIP1Q6ZW49 1069 aaPredicted RBP13.98□□□□□ -0.17
GFAP-216ENST00000589701 ADGRB2O60241 1585 aa13.98□□□□□ -0.17
GFAP-216ENST00000589701 PNPLA6Q8IY17 1366 aa13.98□□□□□ -0.17
GFAP-216ENST00000589701 IL13P35225 146 aa13.97□□□□□ -0.17
GFAP-216ENST00000589701 HDGFP51858 240 aaKnown RBP13.97□□□□□ -0.17
GFAP-216ENST00000589701 KIF20BQ96Q89 1820 aa13.97□□□□□ -0.17
GFAP-216ENST00000589701 FCHSD2O94868 740 aa13.97□□□□□ -0.17
GFAP-216ENST00000589701 MED14O60244 1454 aa13.96□□□□□ -0.17
GFAP-216ENST00000589701 HSP90AB2PQ58FF8 381 aa13.96□□□□□ -0.17
GFAP-216ENST00000589701 ATF7IPQ6VMQ6 1270 aa13.96□□□□□ -0.17
GFAP-216ENST00000589701 TMEM2Q9UHN6 1383 aa13.96□□□□□ -0.18
GFAP-216ENST00000589701 ACEP12821 1306 aa13.96□□□□□ -0.18
GFAP-216ENST00000589701 ARXQ96QS3 562 aa13.95□□□□□ -0.18
GFAP-216ENST00000589701 CPSF1Q10570 1443 aaKnown RBP13.95□□□□□ -0.18
GFAP-216ENST00000589701 SULT6B1Q6IMI4 303 aa13.94□□□□□ -0.18
GFAP-216ENST00000589701 MBIPQ9NS73 344 aa13.94□□□□□ -0.18
GFAP-216ENST00000589701 MIS18AQ9NYP9 233 aa13.94□□□□□ -0.18
GFAP-216ENST00000589701 NPHP4O75161 1426 aaPredicted RBP13.94□□□□□ -0.18
GFAP-216ENST00000589701 ANKRD26Q9UPS8 1709 aa13.94□□□□□ -0.18
GFAP-216ENST00000589701 MCM10Q7L590 875 aa13.94□□□□□ -0.18
GFAP-216ENST00000589701 C8orf58Q8NAV2 365 aa13.94□□□□□ -0.18
GFAP-216ENST00000589701 USP19O94966 1318 aa13.93□□□□□ -0.18
GFAP-216ENST00000589701 NFE2L2Q16236 605 aa13.93□□□□□ -0.18
GFAP-216ENST00000589701 DLC1Q96QB1 1528 aa13.93□□□□□ -0.18
GFAP-216ENST00000589701 UBR1Q8IWV7 1749 aa13.93□□□□□ -0.18
GFAP-216ENST00000589701 AMOTL2Q9Y2J4 779 aa13.93□□□□□ -0.18
GFAP-216ENST00000589701 UBAP1LF5GYI3 381 aa13.92□□□□□ -0.18
GFAP-216ENST00000589701 FAM135BQ49AJ0 1406 aa13.92□□□□□ -0.18
GFAP-216ENST00000589701 EDC4Q6P2E9 1401 aaKnown RBP13.92□□□□□ -0.18
GFAP-216ENST00000589701 FOXO3O43524 673 aa13.92□□□□□ -0.18
GFAP-216ENST00000589701 SPRYD3Q8NCJ5 442 aa13.92□□□□□ -0.18
GFAP-216ENST00000589701 ATP7BP35670 1465 aa13.92□□□□□ -0.18
GFAP-216ENST00000589701 ADAMTS13Q76LX8 1427 aa13.92□□□□□ -0.18
GFAP-216ENST00000589701 EIF4A2Q14240 407 aaKnown RBP13.91□□□□□ -0.18
GFAP-216ENST00000589701 RWDD1Q9H446 243 aaPredicted RBP13.91□□□□□ -0.18
GFAP-216ENST00000589701 PTPRUQ92729 1446 aa13.9□□□□□ -0.18
GFAP-216ENST00000589701 VAMP4O75379 141 aa13.9□□□□□ -0.18
GFAP-216ENST00000589701 DHX37Q8IY37 1157 aaKnown RBP13.9□□□□□ -0.18
GFAP-216ENST00000589701 LNPKQ9C0E8 428 aa13.9□□□□□ -0.18
GFAP-216ENST00000589701 TTC21BQ7Z4L5 1316 aa13.9□□□□□ -0.18
GFAP-216ENST00000589701 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.89□□□□□ -0.19
GFAP-216ENST00000589701 SLKQ9H2G2 1235 aaPredicted RBP13.88□□□□□ -0.19
GFAP-216ENST00000589701 SLIT1O75093 1534 aa13.88□□□□□ -0.19
GFAP-216ENST00000589701 TWISTNBQ3B726 338 aaPredicted RBP13.88□□□□□ -0.19
GFAP-216ENST00000589701 ZBTB40Q9NUA8 1239 aa13.88□□□□□ -0.19
GFAP-216ENST00000589701 NGDNQ8NEJ9 315 aaKnown RBP13.87□□□□□ -0.19
GFAP-216ENST00000589701 DDRGK1Q96HY6 314 aa13.87□□□□□ -0.19
GFAP-216ENST00000589701 DDX19BQ9UMR2 479 aa13.87□□□□□ -0.19
GFAP-216ENST00000589701 ARHGAP23Q9P227 1491 aa13.87□□□□□ -0.19
GFAP-216ENST00000589701 C14orf37Q86TY3 774 aa13.87□□□□□ -0.19
GFAP-216ENST00000589701 LTV1Q96GA3 475 aaPredicted RBP13.87□□□□□ -0.19
GFAP-216ENST00000589701 PNNQ9H307 717 aaKnown RBP13.87□□□□□ -0.19
GFAP-216ENST00000589701 EID1Q9Y6B2 187 aa13.87□□□□□ -0.19
GFAP-216ENST00000589701 TOM1O60784 492 aa13.87□□□□□ -0.19
GFAP-216ENST00000589701 DLG5Q8TDM6 1919 aa13.86□□□□□ -0.19
GFAP-216ENST00000589701 MFAP1P55081 439 aaKnown RBP13.86□□□□□ -0.19
GFAP-216ENST00000589701 IL16Q14005 1332 aa13.86□□□□□ -0.19
GFAP-216ENST00000589701 KCNA6P17658 529 aa13.86□□□□□ -0.19
GFAP-216ENST00000589701 CDC42BPGQ6DT37 1551 aa13.86□□□□□ -0.19
GFAP-216ENST00000589701 ZBTB7CA1YPR0 619 aa13.85□□□□□ -0.19
GFAP-216ENST00000589701 MRPL50Q8N5N7 158 aaKnown RBP13.85□□□□□ -0.19
GFAP-216ENST00000589701 APBB1O00213 710 aa13.85□□□□□ -0.19
GFAP-216ENST00000589701 NFKBIBQ15653 356 aa13.85□□□□□ -0.19
GFAP-216ENST00000589701 SIRT1Q96EB6 747 aa13.85□□□□□ -0.19
GFAP-216ENST00000589701 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
GFAP-216ENST00000589701 RGPD8O14715 1765 aaPredicted RBP13.85□□□□□ -0.19
GFAP-216ENST00000589701 PLEKHG1Q9ULL1 1385 aa13.84□□□□□ -0.19
GFAP-216ENST00000589701 MAP3K19Q56UN5 1328 aa13.84□□□□□ -0.19
GFAP-216ENST00000589701 FRAT2O75474 233 aaPredicted RBP13.84□□□□□ -0.19
GFAP-216ENST00000589701 NECTIN2Q92692 538 aa13.84□□□□□ -0.19
GFAP-216ENST00000589701 KIF16BQ96L93 1317 aa13.84□□□□□ -0.19
GFAP-216ENST00000589701 GNAI1P63096 354 aa13.84□□□□□ -0.19
GFAP-216ENST00000589701 KNDC1Q76NI1 1749 aa13.83□□□□□ -0.19
GFAP-216ENST00000589701 TECPR2O15040 1411 aa13.83□□□□□ -0.19
GFAP-216ENST00000589701 IPO8O15397 1037 aaKnown RBP13.83□□□□□ -0.2
GFAP-216ENST00000589701 CT47B1P0C2W7 299 aaPredicted RBP13.83□□□□□ -0.2
GFAP-216ENST00000589701 CFAP44Q96MT7 982 aa13.83□□□□□ -0.2
GFAP-216ENST00000589701 CDK12Q9NYV4 1490 aaPredicted RBP13.83□□□□□ -0.2
GFAP-216ENST00000589701 ZBTB7BO15156 539 aaPredicted RBP13.82□□□□□ -0.2
GFAP-216ENST00000589701 ZNF853P0CG23 659 aa13.82□□□□□ -0.2
GFAP-216ENST00000589701 ANKRD45Q5TZF3 282 aa13.82□□□□□ -0.2
GFAP-216ENST00000589701 SIRT2Q8IXJ6 389 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms