RNA–Protein interactions for RNA: ENST00000589663.5

BECN1-212, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 489 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-212ENST00000589663 NKTRP30414 1462 aaKnown RBP12.97□□□□□ -0.33
BECN1-212ENST00000589663 RIMS1Q86UR5 1692 aaKnown RBP12.96□□□□□ -0.33
BECN1-212ENST00000589663 SEMA3EO15041 775 aa12.96□□□□□ -0.33
BECN1-212ENST00000589663 MAP3K13O43283 966 aa12.96□□□□□ -0.33
BECN1-212ENST00000589663 BRPF1P55201 1214 aaPredicted RBP12.96□□□□□ -0.33
BECN1-212ENST00000589663 SLFN5Q08AF3 891 aa12.96□□□□□ -0.33
BECN1-212ENST00000589663 ZC3H15Q8WU90 426 aaKnown RBP12.96□□□□□ -0.33
BECN1-212ENST00000589663 GGNBP2Q9H3C7 697 aa12.96□□□□□ -0.33
BECN1-212ENST00000589663 IQSEC2Q5JU85 1478 aa12.96□□□□□ -0.34
BECN1-212ENST00000589663 DUSP27Q5VZP5 1158 aa12.95□□□□□ -0.34
BECN1-212ENST00000589663 TOPAZ1Q8N9V7 1692 aa12.94□□□□□ -0.34
BECN1-212ENST00000589663 FYB1O15117 783 aa12.94□□□□□ -0.34
BECN1-212ENST00000589663 U2AF1L5P0DN76 240 aaPredicted RBP12.94□□□□□ -0.34
BECN1-212ENST00000589663 U2AF1Q01081 240 aaKnown RBP eCLIP12.94□□□□□ -0.34
BECN1-212ENST00000589663 CEP170BQ9Y4F5 1589 aaPredicted RBP12.94□□□□□ -0.34
BECN1-212ENST00000589663 CEBPAP49715 358 aaPredicted RBP12.93□□□□□ -0.34
BECN1-212ENST00000589663 NUDT16Q96DE0 195 aaKnown RBP12.93□□□□□ -0.34
BECN1-212ENST00000589663 CPSF1Q10570 1443 aaKnown RBP12.93□□□□□ -0.34
BECN1-212ENST00000589663 PTCH1Q13635 1447 aa12.93□□□□□ -0.34
BECN1-212ENST00000589663 ZNF142P52746 1687 aaPredicted RBP12.93□□□□□ -0.34
BECN1-212ENST00000589663 MAPK8IP3Q9UPT6 1336 aa12.92□□□□□ -0.34
BECN1-212ENST00000589663 COL3A1P02461 1466 aaPredicted RBP12.92□□□□□ -0.34
BECN1-212ENST00000589663 SOX12O15370 315 aa12.92□□□□□ -0.34
BECN1-212ENST00000589663 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
BECN1-212ENST00000589663 NEFMP07197 916 aa12.92□□□□□ -0.34
BECN1-212ENST00000589663 CCDC27Q2M243 656 aa12.92□□□□□ -0.34
BECN1-212ENST00000589663 ERICH6Q7L0X2 663 aa12.92□□□□□ -0.34
BECN1-212ENST00000589663 C14orf37Q86TY3 774 aa12.92□□□□□ -0.34
BECN1-212ENST00000589663 WDR63Q8IWG1 891 aa12.92□□□□□ -0.34
BECN1-212ENST00000589663 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
BECN1-212ENST00000589663 MAP2P11137 1827 aaKnown RBP12.92□□□□□ -0.34
BECN1-212ENST00000589663 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.91□□□□□ -0.34
BECN1-212ENST00000589663 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
BECN1-212ENST00000589663 TCP11L2Q8N4U5 519 aa12.91□□□□□ -0.34
BECN1-212ENST00000589663 KIF12Q96FN5 646 aa12.91□□□□□ -0.34
BECN1-212ENST00000589663 ROBO2Q9HCK4 1378 aa12.91□□□□□ -0.34
BECN1-212ENST00000589663 TESPA1A2RU30 521 aaPredicted RBP12.9□□□□□ -0.34
BECN1-212ENST00000589663 U2SURPO15042 1029 aaKnown RBP12.9□□□□□ -0.34
BECN1-212ENST00000589663 DIAPH1O60610 1272 aaKnown RBP12.9□□□□□ -0.34
BECN1-212ENST00000589663 LTKP29376 864 aa12.9□□□□□ -0.34
BECN1-212ENST00000589663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.9□□□□□ -0.34
BECN1-212ENST00000589663 WWC1Q8IX03 1113 aa12.9□□□□□ -0.34
BECN1-212ENST00000589663 EXOC6Q8TAG9 804 aa12.9□□□□□ -0.34
BECN1-212ENST00000589663 MYH16Q9H6N6 1097 aa12.9□□□□□ -0.34
BECN1-212ENST00000589663 SLC24A3Q9HC58 644 aa12.9□□□□□ -0.34
BECN1-212ENST00000589663 XRN1Q8IZH2 1706 aaKnown RBP12.89□□□□□ -0.35
BECN1-212ENST00000589663 COG3Q96JB2 828 aa12.89□□□□□ -0.35
BECN1-212ENST00000589663 PIK3R4Q99570 1358 aa12.89□□□□□ -0.35
BECN1-212ENST00000589663 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
BECN1-212ENST00000589663 AATKQ6ZMQ8 1374 aa12.88□□□□□ -0.35
BECN1-212ENST00000589663 PNPLA6Q8IY17 1366 aa12.88□□□□□ -0.35
BECN1-212ENST00000589663 CDK12Q9NYV4 1490 aaPredicted RBP12.88□□□□□ -0.35
BECN1-212ENST00000589663 NRKQ7Z2Y5 1582 aa12.88□□□□□ -0.35
BECN1-212ENST00000589663 ADAMTSL3P82987 1691 aa12.87□□□□□ -0.35
BECN1-212ENST00000589663 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
BECN1-212ENST00000589663 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
BECN1-212ENST00000589663 PTPRUQ92729 1446 aa12.87□□□□□ -0.35
BECN1-212ENST00000589663 SETD1BQ9UPS6 1966 aaKnown RBP12.87□□□□□ -0.35
BECN1-212ENST00000589663 SLC26A8Q96RN1 970 aa12.86□□□□□ -0.35
BECN1-212ENST00000589663 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
BECN1-212ENST00000589663 AMOTL2Q9Y2J4 779 aa12.86□□□□□ -0.35
BECN1-212ENST00000589663 PLIN1O60240 522 aa12.85□□□□□ -0.35
BECN1-212ENST00000589663 CANXP27824 592 aaKnown RBP12.85□□□□□ -0.35
BECN1-212ENST00000589663 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
BECN1-212ENST00000589663 PLEKHG3A1L390 1219 aa12.84□□□□□ -0.35
BECN1-212ENST00000589663 FCHSD2O94868 740 aa12.84□□□□□ -0.35
BECN1-212ENST00000589663 CT47B1P0C2W7 299 aaPredicted RBP12.84□□□□□ -0.35
BECN1-212ENST00000589663 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
BECN1-212ENST00000589663 RBM19Q9Y4C8 960 aaKnown RBP12.84□□□□□ -0.35
BECN1-212ENST00000589663 ANKARQ7Z5J8 1434 aa12.84□□□□□ -0.35
BECN1-212ENST00000589663 IL16Q14005 1332 aa12.84□□□□□ -0.35
BECN1-212ENST00000589663 LRRC7Q96NW7 1537 aa12.83□□□□□ -0.35
BECN1-212ENST00000589663 NALCNQ8IZF0 1738 aa12.83□□□□□ -0.36
BECN1-212ENST00000589663 PPM1GO15355 546 aaPredicted RBP12.83□□□□□ -0.36
BECN1-212ENST00000589663 NME9Q86XW9 330 aa12.83□□□□□ -0.36
BECN1-212ENST00000589663 MS4A4AQ96JQ5 239 aa12.83□□□□□ -0.36
BECN1-212ENST00000589663 POLKQ9UBT6 870 aa12.83□□□□□ -0.36
BECN1-212ENST00000589663 TTC21AQ8NDW8 1320 aa12.83□□□□□ -0.36
BECN1-212ENST00000589663 PRR36Q9H6K5 1346 aa12.83□□□□□ -0.36
BECN1-212ENST00000589663 FMN2Q9NZ56 1722 aa12.82□□□□□ -0.36
BECN1-212ENST00000589663 USP6P35125 1406 aa12.82□□□□□ -0.36
BECN1-212ENST00000589663 TMPOP42166 694 aaKnown RBP12.82□□□□□ -0.36
BECN1-212ENST00000589663 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
BECN1-212ENST00000589663 ANKLE2Q86XL3 938 aa12.82□□□□□ -0.36
BECN1-212ENST00000589663 CHD2O14647 1828 aaKnown RBP12.82□□□□□ -0.36
BECN1-212ENST00000589663 TTC21BQ7Z4L5 1316 aa12.82□□□□□ -0.36
BECN1-212ENST00000589663 PDE4AP27815 886 aa12.81□□□□□ -0.36
BECN1-212ENST00000589663 PDE3AQ14432 1141 aa12.81□□□□□ -0.36
BECN1-212ENST00000589663 PLEKHF1Q96S99 279 aa12.81□□□□□ -0.36
BECN1-212ENST00000589663 ACEP12821 1306 aa12.81□□□□□ -0.36
BECN1-212ENST00000589663 TCERG1O14776 1098 aaKnown RBP12.8□□□□□ -0.36
BECN1-212ENST00000589663 MS4A1P11836 297 aa12.8□□□□□ -0.36
BECN1-212ENST00000589663 LMOD3Q0VAK6 560 aa12.8□□□□□ -0.36
BECN1-212ENST00000589663 AAMPQ13685 434 aa12.79□□□□□ -0.36
BECN1-212ENST00000589663 RGPD8O14715 1765 aaPredicted RBP12.79□□□□□ -0.36
BECN1-212ENST00000589663 OVOS2A0A0J9YW53 1432 aa12.79□□□□□ -0.36
BECN1-212ENST00000589663 OVOS2Q6IE36 1432 aa12.79□□□□□ -0.36
BECN1-212ENST00000589663 RIPK4P57078 832 aa12.78□□□□□ -0.36
BECN1-212ENST00000589663 MFSD10Q14728 455 aa12.78□□□□□ -0.36
BECN1-212ENST00000589663 CENPQQ7L2Z9 268 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms