RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 FLT4P35916 1363 aa15.88■□□□□ 0.13
CCBE1-203ENST00000589116 FCHSD2O94868 740 aa15.88■□□□□ 0.13
CCBE1-203ENST00000589116 GOLGA2Q08379 1002 aa15.88■□□□□ 0.13
CCBE1-203ENST00000589116 RGS12O14924 1447 aa15.88■□□□□ 0.13
CCBE1-203ENST00000589116 FOXO3O43524 673 aa15.87■□□□□ 0.13
CCBE1-203ENST00000589116 CCDC27Q2M243 656 aa15.87■□□□□ 0.13
CCBE1-203ENST00000589116 TCP11L2Q8N4U5 519 aa15.87■□□□□ 0.13
CCBE1-203ENST00000589116 PLEKHF1Q96S99 279 aa15.87■□□□□ 0.13
CCBE1-203ENST00000589116 MAP3K19Q56UN5 1328 aa15.87■□□□□ 0.13
CCBE1-203ENST00000589116 MAPK8IP3Q9UPT6 1336 aa15.87■□□□□ 0.13
CCBE1-203ENST00000589116 ALS2Q96Q42 1657 aa15.86■□□□□ 0.13
CCBE1-203ENST00000589116 SUPT16HQ9Y5B9 1047 aaKnown RBP15.86■□□□□ 0.13
CCBE1-203ENST00000589116 RGPD1P0DJD0 1748 aa15.86■□□□□ 0.13
CCBE1-203ENST00000589116 RTL1A6NKG5 1358 aa15.86■□□□□ 0.13
CCBE1-203ENST00000589116 SLIT3O75094 1523 aa15.86■□□□□ 0.13
CCBE1-203ENST00000589116 NFAT5O94916 1531 aa15.86■□□□□ 0.13
CCBE1-203ENST00000589116 PHRF1Q9P1Y6 1649 aaKnown RBP15.86■□□□□ 0.13
CCBE1-203ENST00000589116 KRT28Q7Z3Y7 464 aa15.85■□□□□ 0.13
CCBE1-203ENST00000589116 CDCA7LQ96GN5 454 aa15.85■□□□□ 0.13
CCBE1-203ENST00000589116 RSPH6AQ9H0K4 717 aa15.85■□□□□ 0.13
CCBE1-203ENST00000589116 LTN1O94822 1766 aa15.85■□□□□ 0.13
CCBE1-203ENST00000589116 AHDC1Q5TGY3 1603 aaPredicted RBP15.84■□□□□ 0.13
CCBE1-203ENST00000589116 NPHP3Q7Z494 1330 aa15.84■□□□□ 0.13
CCBE1-203ENST00000589116 NEFMP07197 916 aa15.84■□□□□ 0.13
CCBE1-203ENST00000589116 KCNH5Q8NCM2 988 aa15.84■□□□□ 0.13
CCBE1-203ENST00000589116 RBM6P78332 1123 aaKnown RBP15.83■□□□□ 0.13
CCBE1-203ENST00000589116 WWC1Q8IX03 1113 aa15.83■□□□□ 0.13
CCBE1-203ENST00000589116 E9PSI1 815 aa15.83■□□□□ 0.12
CCBE1-203ENST00000589116 SLFN5Q08AF3 891 aa15.83■□□□□ 0.12
CCBE1-203ENST00000589116 EIF4A2Q14240 407 aaKnown RBP15.83■□□□□ 0.12
CCBE1-203ENST00000589116 USP19O94966 1318 aa15.82■□□□□ 0.12
CCBE1-203ENST00000589116 RNF123Q5XPI4 1314 aa15.82■□□□□ 0.12
CCBE1-203ENST00000589116 SOX12O15370 315 aa15.82■□□□□ 0.12
CCBE1-203ENST00000589116 AMPHP49418 695 aa15.82■□□□□ 0.12
CCBE1-203ENST00000589116 DUSP27Q5VZP5 1158 aa15.82■□□□□ 0.12
CCBE1-203ENST00000589116 NUTM2GQ5VZR2 741 aa15.82■□□□□ 0.12
CCBE1-203ENST00000589116 WDR63Q8IWG1 891 aa15.82■□□□□ 0.12
CCBE1-203ENST00000589116 QTRT2Q9H974 415 aaKnown RBP15.82■□□□□ 0.12
CCBE1-203ENST00000589116 ARHGEF10O15013 1369 aa15.81■□□□□ 0.12
CCBE1-203ENST00000589116 PRKAR2BP31323 418 aa15.81■□□□□ 0.12
CCBE1-203ENST00000589116 TMPOP42166 694 aaKnown RBP15.81■□□□□ 0.12
CCBE1-203ENST00000589116 HSP90AB2PQ58FF8 381 aa15.81■□□□□ 0.12
CCBE1-203ENST00000589116 TRMT2AQ8IZ69 625 aaKnown RBP15.81■□□□□ 0.12
CCBE1-203ENST00000589116 PXDNQ92626 1479 aa15.8■□□□□ 0.12
CCBE1-203ENST00000589116 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
CCBE1-203ENST00000589116 FKBP8Q14318 412 aa15.79■□□□□ 0.12
CCBE1-203ENST00000589116 C8orf37Q96NL8 207 aa15.79■□□□□ 0.12
CCBE1-203ENST00000589116 RRP7AQ9Y3A4 280 aaKnown RBP15.79■□□□□ 0.12
CCBE1-203ENST00000589116 TNS3Q68CZ2 1445 aa15.79■□□□□ 0.12
CCBE1-203ENST00000589116 HOXC9P31274 260 aa15.79■□□□□ 0.12
CCBE1-203ENST00000589116 NEUROD2Q15784 382 aa15.79■□□□□ 0.12
CCBE1-203ENST00000589116 ERICH6BQ5W0A0 696 aa15.79■□□□□ 0.12
CCBE1-203ENST00000589116 RCAN3Q9UKA8 241 aa15.79■□□□□ 0.12
CCBE1-203ENST00000589116 HMOX1P09601 288 aa15.78■□□□□ 0.12
CCBE1-203ENST00000589116 NGLY1Q96IV0 654 aa15.78■□□□□ 0.12
CCBE1-203ENST00000589116 BRINP3Q76B58 766 aa15.77■□□□□ 0.12
CCBE1-203ENST00000589116 KDRP35968 1356 aa15.77■□□□□ 0.11
CCBE1-203ENST00000589116 IGSF1Q8N6C5 1336 aa15.76■□□□□ 0.11
CCBE1-203ENST00000589116 GCP02774 474 aa15.76■□□□□ 0.11
CCBE1-203ENST00000589116 NFE2L2Q16236 605 aa15.76■□□□□ 0.11
CCBE1-203ENST00000589116 IP6K1Q92551 441 aa15.76■□□□□ 0.11
CCBE1-203ENST00000589116 IL16Q14005 1332 aa15.76■□□□□ 0.11
CCBE1-203ENST00000589116 CRYBG1Q9Y4K1 1723 aa15.75■□□□□ 0.11
CCBE1-203ENST00000589116 NHSL1Q5SYE7 1610 aa15.75■□□□□ 0.11
CCBE1-203ENST00000589116 RIPK4P57078 832 aa15.75■□□□□ 0.11
CCBE1-203ENST00000589116 SPINK5Q9NQ38 1064 aaPredicted RBP15.75■□□□□ 0.11
CCBE1-203ENST00000589116 TRIM35Q9UPQ4 493 aa15.75■□□□□ 0.11
CCBE1-203ENST00000589116 DLG5Q8TDM6 1919 aa15.75■□□□□ 0.11
CCBE1-203ENST00000589116 SULT6B1Q6IMI4 303 aa15.74■□□□□ 0.11
CCBE1-203ENST00000589116 LMOD2Q6P5Q4 547 aa15.74■□□□□ 0.11
CCBE1-203ENST00000589116 MYH16Q9H6N6 1097 aa15.74■□□□□ 0.11
CCBE1-203ENST00000589116 SPATA31A3Q5VYP0 1347 aa15.74■□□□□ 0.11
CCBE1-203ENST00000589116 ABCC6O95255 1503 aa15.74■□□□□ 0.11
CCBE1-203ENST00000589116 LMOD3Q0VAK6 560 aa15.73■□□□□ 0.11
CCBE1-203ENST00000589116 ARHGEF25Q86VW2 580 aa15.73■□□□□ 0.11
CCBE1-203ENST00000589116 PHACTR3Q96KR7 559 aa15.73■□□□□ 0.11
CCBE1-203ENST00000589116 SOS2Q07890 1332 aaPredicted RBP15.73■□□□□ 0.11
CCBE1-203ENST00000589116 RRP1P56182 461 aaKnown RBP15.72■□□□□ 0.11
CCBE1-203ENST00000589116 CALD1Q05682 793 aaKnown RBP15.72■□□□□ 0.11
CCBE1-203ENST00000589116 AEBP1Q8IUX7 1158 aa15.72■□□□□ 0.11
CCBE1-203ENST00000589116 DDX17Q92841 729 aaKnown RBP15.72■□□□□ 0.11
CCBE1-203ENST00000589116 EYA1Q99502 592 aa15.72■□□□□ 0.11
CCBE1-203ENST00000589116 CAMTA1Q9Y6Y1 1673 aa15.7■□□□□ 0.1
CCBE1-203ENST00000589116 LRRC59Q96AG4 307 aaKnown RBP15.7■□□□□ 0.1
CCBE1-203ENST00000589116 CCDC125Q86Z20 511 aa15.69■□□□□ 0.1
CCBE1-203ENST00000589116 CT47B1P0C2W7 299 aaPredicted RBP15.68■□□□□ 0.1
CCBE1-203ENST00000589116 NCAPD2Q15021 1401 aa15.68■□□□□ 0.1
CCBE1-203ENST00000589116 ADAMTS2O95450 1211 aa15.67■□□□□ 0.1
CCBE1-203ENST00000589116 IRX6P78412 446 aaPredicted RBP15.67■□□□□ 0.1
CCBE1-203ENST00000589116 CPDO75976 1380 aa15.67■□□□□ 0.1
CCBE1-203ENST00000589116 FAM208AQ9UK61 1670 aaKnown RBP15.67■□□□□ 0.1
CCBE1-203ENST00000589116 COL18A1P39060 1754 aa15.67■□□□□ 0.1
CCBE1-203ENST00000589116 ABCA3Q99758 1704 aa15.66■□□□□ 0.1
CCBE1-203ENST00000589116 FANCIQ9NVI1 1328 aa15.66■□□□□ 0.1
CCBE1-203ENST00000589116 GAS2L2Q8NHY3 880 aa15.66■□□□□ 0.1
CCBE1-203ENST00000589116 ZBTB7CA1YPR0 619 aa15.65■□□□□ 0.1
CCBE1-203ENST00000589116 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.65■□□□□ 0.1
CCBE1-203ENST00000589116 LTV1Q96GA3 475 aaPredicted RBP15.65■□□□□ 0.1
CCBE1-203ENST00000589116 USP21Q9UK80 565 aa15.65■□□□□ 0.1
CCBE1-203ENST00000589116 TRPC5Q9UL62 973 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms