RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 POGKQ9P215 609 aa17.06■□□□□ 0.32
KDM4B-208ENST00000589104 KDM3BQ7LBC6 1761 aa17.06■□□□□ 0.32
KDM4B-208ENST00000589104 IL13P35225 146 aa17.06■□□□□ 0.32
KDM4B-208ENST00000589104 EXOSC9Q06265 439 aaKnown RBP17.06■□□□□ 0.32
KDM4B-208ENST00000589104 USP31Q70CQ4 1352 aa17.06■□□□□ 0.32
KDM4B-208ENST00000589104 SIRT2Q8IXJ6 389 aa17.05■□□□□ 0.32
KDM4B-208ENST00000589104 MRPL50Q8N5N7 158 aaKnown RBP17.05■□□□□ 0.32
KDM4B-208ENST00000589104 POLKQ9UBT6 870 aa17.05■□□□□ 0.32
KDM4B-208ENST00000589104 BMP2KLQ5H9B9 411 aa17.04■□□□□ 0.32
KDM4B-208ENST00000589104 TSR2Q969E8 191 aaKnown RBP17.04■□□□□ 0.32
KDM4B-208ENST00000589104 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
KDM4B-208ENST00000589104 RIMS2Q9UQ26 1411 aa17.03■□□□□ 0.32
KDM4B-208ENST00000589104 SLIT1O75093 1534 aa17.03■□□□□ 0.32
KDM4B-208ENST00000589104 VAMP4O75379 141 aa17.03■□□□□ 0.32
KDM4B-208ENST00000589104 TMEM57Q8N5G2 664 aa17.03■□□□□ 0.32
KDM4B-208ENST00000589104 CRB1P82279 1406 aa17.02■□□□□ 0.32
KDM4B-208ENST00000589104 ADAMTS13Q76LX8 1427 aa17.02■□□□□ 0.32
KDM4B-208ENST00000589104 NOB1Q9ULX3 412 aaKnown RBP17.02■□□□□ 0.32
KDM4B-208ENST00000589104 SIPA1L3O60292 1781 aaPredicted RBP17.02■□□□□ 0.32
KDM4B-208ENST00000589104 RGPD8O14715 1765 aaPredicted RBP17.01■□□□□ 0.31
KDM4B-208ENST00000589104 A0A0U1RQG5 324 aaPredicted RBP17.01■□□□□ 0.31
KDM4B-208ENST00000589104 BECN1Q14457 450 aa17.01■□□□□ 0.31
KDM4B-208ENST00000589104 LMTK3Q96Q04 1460 aa17■□□□□ 0.31
KDM4B-208ENST00000589104 ARHGAP23Q9P227 1491 aa17■□□□□ 0.31
KDM4B-208ENST00000589104 IFT57Q9NWB7 429 aa17■□□□□ 0.31
KDM4B-208ENST00000589104 MCM4P33991 863 aa17■□□□□ 0.31
KDM4B-208ENST00000589104 RAPGEF3O95398 923 aa16.99■□□□□ 0.31
KDM4B-208ENST00000589104 RTL1A6NKG5 1358 aa16.99■□□□□ 0.31
KDM4B-208ENST00000589104 KIAA0232Q92628 1395 aa16.99■□□□□ 0.31
KDM4B-208ENST00000589104 C22orf23Q9BZE7 217 aa16.98■□□□□ 0.31
KDM4B-208ENST00000589104 LMO7Q8WWI1 1683 aa16.98■□□□□ 0.31
KDM4B-208ENST00000589104 METP08581 1390 aa16.97■□□□□ 0.31
KDM4B-208ENST00000589104 CYP2E1P05181 493 aaPredicted RBP16.97■□□□□ 0.31
KDM4B-208ENST00000589104 PRAM1Q96QH2 718 aa16.97■□□□□ 0.31
KDM4B-208ENST00000589104 ISY1Q9ULR0 285 aaKnown RBP16.97■□□□□ 0.31
KDM4B-208ENST00000589104 CIZ1Q9ULV3 898 aaPredicted RBP16.97■□□□□ 0.31
KDM4B-208ENST00000589104 U2AF1L5P0DN76 240 aaPredicted RBP16.97■□□□□ 0.31
KDM4B-208ENST00000589104 U2AF1Q01081 240 aaKnown RBP eCLIP16.97■□□□□ 0.31
KDM4B-208ENST00000589104 RAB3GAP1Q15042 981 aa16.97■□□□□ 0.31
KDM4B-208ENST00000589104 NFE2L2Q16236 605 aa16.97■□□□□ 0.31
KDM4B-208ENST00000589104 TERF2IPQ9NYB0 399 aa16.97■□□□□ 0.31
KDM4B-208ENST00000589104 KDRP35968 1356 aa16.96■□□□□ 0.31
KDM4B-208ENST00000589104 PXDNLA1KZ92 1463 aa16.96■□□□□ 0.3
KDM4B-208ENST00000589104 DIAPH1O60610 1272 aaKnown RBP16.95■□□□□ 0.3
KDM4B-208ENST00000589104 CDK19Q9BWU1 502 aa16.95■□□□□ 0.3
KDM4B-208ENST00000589104 BCL2L13Q9BXK5 485 aa16.95■□□□□ 0.3
KDM4B-208ENST00000589104 XRCC6P12956 609 aaKnown RBP eCLIP16.95■□□□□ 0.3
KDM4B-208ENST00000589104 CHD1LQ86WJ1 897 aa16.95■□□□□ 0.3
KDM4B-208ENST00000589104 GGNBP2Q9H3C7 697 aa16.95■□□□□ 0.3
KDM4B-208ENST00000589104 ARHGEF10O15013 1369 aa16.95■□□□□ 0.3
KDM4B-208ENST00000589104 GCC1Q96CN9 775 aa16.95■□□□□ 0.3
KDM4B-208ENST00000589104 RRAGDQ9NQL2 400 aaPredicted RBP16.95■□□□□ 0.3
KDM4B-208ENST00000589104 PTPRUQ92729 1446 aa16.95■□□□□ 0.3
KDM4B-208ENST00000589104 PHACTR3Q96KR7 559 aa16.94■□□□□ 0.3
KDM4B-208ENST00000589104 SALL3Q9BXA9 1300 aa16.94■□□□□ 0.3
KDM4B-208ENST00000589104 GGT6Q6P531 493 aa16.94■□□□□ 0.3
KDM4B-208ENST00000589104 PNNQ9H307 717 aaKnown RBP16.94■□□□□ 0.3
KDM4B-208ENST00000589104 CHMP5Q9NZZ3 219 aa16.94■□□□□ 0.3
KDM4B-208ENST00000589104 CHD2O14647 1828 aaKnown RBP16.94■□□□□ 0.3
KDM4B-208ENST00000589104 ARXQ96QS3 562 aa16.93■□□□□ 0.3
KDM4B-208ENST00000589104 INTS3Q68E01 1043 aaKnown RBP16.93■□□□□ 0.3
KDM4B-208ENST00000589104 TSPOAP1O95153 1857 aa16.92■□□□□ 0.3
KDM4B-208ENST00000589104 SMC4Q9NTJ3 1288 aa16.92■□□□□ 0.3
KDM4B-208ENST00000589104 RIPK4P57078 832 aa16.92■□□□□ 0.3
KDM4B-208ENST00000589104 CD2BP2O95400 341 aaKnown RBP16.91■□□□□ 0.3
KDM4B-208ENST00000589104 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
KDM4B-208ENST00000589104 GSPT1P15170 499 aaKnown RBP16.9■□□□□ 0.3
KDM4B-208ENST00000589104 CFAP44Q96MT7 982 aa16.9■□□□□ 0.3
KDM4B-208ENST00000589104 LTN1O94822 1766 aa16.89■□□□□ 0.29
KDM4B-208ENST00000589104 MBIPQ9NS73 344 aa16.89■□□□□ 0.29
KDM4B-208ENST00000589104 USP6P35125 1406 aa16.89■□□□□ 0.29
KDM4B-208ENST00000589104 NCAPD2Q15021 1401 aa16.89■□□□□ 0.29
KDM4B-208ENST00000589104 TNNT2P45379 298 aaPredicted RBP16.89■□□□□ 0.29
KDM4B-208ENST00000589104 TSPYL6Q8N831 410 aa16.89■□□□□ 0.29
KDM4B-208ENST00000589104 CEP170BQ9Y4F5 1589 aaPredicted RBP16.89■□□□□ 0.29
KDM4B-208ENST00000589104 PRR36Q9H6K5 1346 aa16.89■□□□□ 0.29
KDM4B-208ENST00000589104 L1TD1Q5T7N2 865 aaKnown RBP16.88■□□□□ 0.29
KDM4B-208ENST00000589104 NAP1L5Q96NT1 182 aaPredicted RBP16.88■□□□□ 0.29
KDM4B-208ENST00000589104 CABP1Q9NZU7 370 aa16.88■□□□□ 0.29
KDM4B-208ENST00000589104 IPO8O15397 1037 aaKnown RBP16.87■□□□□ 0.29
KDM4B-208ENST00000589104 DCTPP1Q9H773 170 aa16.87■□□□□ 0.29
KDM4B-208ENST00000589104 NEUROD2Q15784 382 aa16.87■□□□□ 0.29
KDM4B-208ENST00000589104 WASLO00401 505 aaPredicted RBP16.86■□□□□ 0.29
KDM4B-208ENST00000589104 FBXO31Q5XUX0 539 aaPredicted RBP16.86■□□□□ 0.29
KDM4B-208ENST00000589104 DAXXQ9UER7 740 aaPredicted RBP16.86■□□□□ 0.29
KDM4B-208ENST00000589104 AK9Q5TCS8 1911 aa16.86■□□□□ 0.29
KDM4B-208ENST00000589104 ZNF142P52746 1687 aaPredicted RBP16.86■□□□□ 0.29
KDM4B-208ENST00000589104 CLCN1P35523 988 aa16.86■□□□□ 0.29
KDM4B-208ENST00000589104 CANXP27824 592 aaKnown RBP16.85■□□□□ 0.29
KDM4B-208ENST00000589104 OSBPL3Q9H4L5 887 aa16.85■□□□□ 0.29
KDM4B-208ENST00000589104 HSP90AA2PQ14568 343 aaPredicted RBP16.85■□□□□ 0.29
KDM4B-208ENST00000589104 PLEKHG1Q9ULL1 1385 aa16.85■□□□□ 0.29
KDM4B-208ENST00000589104 PRKAR2BP31323 418 aa16.84■□□□□ 0.29
KDM4B-208ENST00000589104 TBC1D9Q6ZT07 1266 aa16.84■□□□□ 0.29
KDM4B-208ENST00000589104 ROBO2Q9HCK4 1378 aa16.84■□□□□ 0.29
KDM4B-208ENST00000589104 CHL1O00533 1208 aa16.84■□□□□ 0.29
KDM4B-208ENST00000589104 PLEKHM2Q8IWE5 1019 aa16.84■□□□□ 0.29
KDM4B-208ENST00000589104 NFAT5O94916 1531 aa16.84■□□□□ 0.29
KDM4B-208ENST00000589104 HDGFL2Q7Z4V5 671 aaPredicted RBP16.84■□□□□ 0.29
KDM4B-208ENST00000589104 FTSJ3Q8IY81 847 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms