RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 LRRC7Q96NW7 1537 aa9.06□□□□□ -0.96
SPIDR-228ENST00000588781 NRXN3Q9Y4C0 1643 aa9.06□□□□□ -0.96
SPIDR-228ENST00000588781 MON2Q7Z3U7 1717 aa9.06□□□□□ -0.96
SPIDR-228ENST00000588781 PRKAR2BP31323 418 aa9.06□□□□□ -0.96
SPIDR-228ENST00000588781 ITPRIPQ8IWB1 547 aa9.06□□□□□ -0.96
SPIDR-228ENST00000588781 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.06□□□□□ -0.96
SPIDR-228ENST00000588781 NUDT16Q96DE0 195 aaKnown RBP9.06□□□□□ -0.96
SPIDR-228ENST00000588781 PDZRN3Q9UPQ7 1066 aa9.06□□□□□ -0.96
SPIDR-228ENST00000588781 EID1Q9Y6B2 187 aa9.06□□□□□ -0.96
SPIDR-228ENST00000588781 KIF24Q5T7B8 1368 aa9.06□□□□□ -0.96
SPIDR-228ENST00000588781 TMEM2Q9UHN6 1383 aa9.06□□□□□ -0.96
SPIDR-228ENST00000588781 PLEKHG1Q9ULL1 1385 aa9.06□□□□□ -0.96
SPIDR-228ENST00000588781 WAPLQ7Z5K2 1190 aa9.05□□□□□ -0.96
SPIDR-228ENST00000588781 SSH1Q8WYL5 1049 aa9.05□□□□□ -0.96
SPIDR-228ENST00000588781 TSR2Q969E8 191 aaKnown RBP9.05□□□□□ -0.96
SPIDR-228ENST00000588781 BCL2L13Q9BXK5 485 aa9.05□□□□□ -0.96
SPIDR-228ENST00000588781 API5Q9BZZ5 524 aaKnown RBP9.05□□□□□ -0.96
SPIDR-228ENST00000588781 PCDHB15Q9Y5E8 787 aa9.05□□□□□ -0.96
SPIDR-228ENST00000588781 AKAP12Q02952 1782 aa9.04□□□□□ -0.96
SPIDR-228ENST00000588781 RLBP1P12271 317 aa9.04□□□□□ -0.96
SPIDR-228ENST00000588781 TRIM27P14373 513 aa9.04□□□□□ -0.96
SPIDR-228ENST00000588781 IL13P35225 146 aa9.04□□□□□ -0.96
SPIDR-228ENST00000588781 NOB1Q9ULX3 412 aaKnown RBP9.04□□□□□ -0.96
SPIDR-228ENST00000588781 LAS1LQ9Y4W2 734 aaKnown RBP9.04□□□□□ -0.96
SPIDR-228ENST00000588781 METP08581 1390 aa9.03□□□□□ -0.96
SPIDR-228ENST00000588781 PLEKHG3A1L390 1219 aa9.03□□□□□ -0.96
SPIDR-228ENST00000588781 GCC1Q96CN9 775 aa9.03□□□□□ -0.96
SPIDR-228ENST00000588781 DIP2AQ14689 1571 aa9.03□□□□□ -0.96
SPIDR-228ENST00000588781 TTC21BQ7Z4L5 1316 aa9.03□□□□□ -0.96
SPIDR-228ENST00000588781 TTC21AQ8NDW8 1320 aa9.03□□□□□ -0.96
SPIDR-228ENST00000588781 UBR1Q8IWV7 1749 aa9.02□□□□□ -0.96
SPIDR-228ENST00000588781 PIK3R4Q99570 1358 aa9.02□□□□□ -0.97
SPIDR-228ENST00000588781 TXNDC2Q86VQ3 553 aa9.02□□□□□ -0.97
SPIDR-228ENST00000588781 SMC5Q8IY18 1101 aa9.02□□□□□ -0.97
SPIDR-228ENST00000588781 MAP2P11137 1827 aaKnown RBP9.02□□□□□ -0.97
SPIDR-228ENST00000588781 PTCH1Q13635 1447 aa9.02□□□□□ -0.97
SPIDR-228ENST00000588781 NRKQ7Z2Y5 1582 aa9.02□□□□□ -0.97
SPIDR-228ENST00000588781 SKAP1Q86WV1 359 aa9.01□□□□□ -0.97
SPIDR-228ENST00000588781 NME9Q86XW9 330 aa9.01□□□□□ -0.97
SPIDR-228ENST00000588781 TMEM57Q8N5G2 664 aa9.01□□□□□ -0.97
SPIDR-228ENST00000588781 TBC1D32Q96NH3 1257 aa9.01□□□□□ -0.97
SPIDR-228ENST00000588781 ZBTB40Q9NUA8 1239 aa9.01□□□□□ -0.97
SPIDR-228ENST00000588781 SRCAPQ6ZRS2 3230 aa9.01□□□□□ -0.97
SPIDR-228ENST00000588781 VAMP4O75379 141 aa9□□□□□ -0.97
SPIDR-228ENST00000588781 ZNF853P0CG23 659 aa9□□□□□ -0.97
SPIDR-228ENST00000588781 NFKBIBQ15653 356 aa9□□□□□ -0.97
SPIDR-228ENST00000588781 MRPL50Q8N5N7 158 aaKnown RBP9□□□□□ -0.97
SPIDR-228ENST00000588781 BCL11AQ9H165 835 aa9□□□□□ -0.97
SPIDR-228ENST00000588781 TOPAZ1Q8N9V7 1692 aa9□□□□□ -0.97
SPIDR-228ENST00000588781 ADAMTS13Q76LX8 1427 aa8.99□□□□□ -0.97
SPIDR-228ENST00000588781 HMOX1P09601 288 aa8.99□□□□□ -0.97
SPIDR-228ENST00000588781 NUCB1Q02818 461 aa8.99□□□□□ -0.97
SPIDR-228ENST00000588781 TWISTNBQ3B726 338 aaPredicted RBP8.99□□□□□ -0.97
SPIDR-228ENST00000588781 POTEAQ6S8J7 498 aa8.99□□□□□ -0.97
SPIDR-228ENST00000588781 SENP3Q9H4L4 574 aaPredicted RBP8.99□□□□□ -0.97
SPIDR-228ENST00000588781 TBX22Q9Y458 520 aa8.99□□□□□ -0.97
SPIDR-228ENST00000588781 EMILIN1Q9Y6C2 1016 aa8.99□□□□□ -0.97
SPIDR-228ENST00000588781 ARHGEF10O15013 1369 aa8.99□□□□□ -0.97
SPIDR-228ENST00000588781 KIAA0232Q92628 1395 aa8.99□□□□□ -0.97
SPIDR-228ENST00000588781 USP6P35125 1406 aa8.98□□□□□ -0.97
SPIDR-228ENST00000588781 THEMISQ8N1K5 641 aaPredicted RBP8.98□□□□□ -0.97
SPIDR-228ENST00000588781 TNNQ9UQP3 1299 aa8.98□□□□□ -0.97
SPIDR-228ENST00000588781 SLIT1O75093 1534 aa8.98□□□□□ -0.97
SPIDR-228ENST00000588781 ABCC4O15439 1325 aa8.98□□□□□ -0.97
SPIDR-228ENST00000588781 USP19O94966 1318 aa8.98□□□□□ -0.97
SPIDR-228ENST00000588781 SOS1Q07889 1333 aaPredicted RBP8.98□□□□□ -0.97
SPIDR-228ENST00000588781 USP31Q70CQ4 1352 aa8.98□□□□□ -0.97
SPIDR-228ENST00000588781 OVOS2A0A0J9YW53 1432 aa8.97□□□□□ -0.97
SPIDR-228ENST00000588781 OVOS2Q6IE36 1432 aa8.97□□□□□ -0.97
SPIDR-228ENST00000588781 ANKARQ7Z5J8 1434 aa8.97□□□□□ -0.97
SPIDR-228ENST00000588781 ARHGAP23Q9P227 1491 aa8.97□□□□□ -0.97
SPIDR-228ENST00000588781 STRCP1A6NGW2 1772 aa8.97□□□□□ -0.97
SPIDR-228ENST00000588781 GSE1Q14687 1217 aa8.97□□□□□ -0.97
SPIDR-228ENST00000588781 CHD1LQ86WJ1 897 aa8.97□□□□□ -0.97
SPIDR-228ENST00000588781 HSCBQ8IWL3 235 aa8.97□□□□□ -0.97
SPIDR-228ENST00000588781 CHMP4AQ9BY43 222 aa8.97□□□□□ -0.97
SPIDR-228ENST00000588781 C22orf23Q9BZE7 217 aa8.97□□□□□ -0.97
SPIDR-228ENST00000588781 MBIPQ9NS73 344 aa8.97□□□□□ -0.97
SPIDR-228ENST00000588781 PTPRCP08575 1304 aa8.97□□□□□ -0.97
SPIDR-228ENST00000588781 ACEP12821 1306 aa8.97□□□□□ -0.97
SPIDR-228ENST00000588781 ROBO2Q9HCK4 1378 aa8.97□□□□□ -0.97
SPIDR-228ENST00000588781 HTATSF1O43719 755 aaKnown RBP8.96□□□□□ -0.98
SPIDR-228ENST00000588781 PTMSP20962 102 aa8.96□□□□□ -0.98
SPIDR-228ENST00000588781 BMP2KLQ5H9B9 411 aa8.96□□□□□ -0.98
SPIDR-228ENST00000588781 GAS2L2Q8NHY3 880 aa8.96□□□□□ -0.98
SPIDR-228ENST00000588781 RTF1Q92541 710 aaKnown RBP8.96□□□□□ -0.98
SPIDR-228ENST00000588781 PHACTR3Q96KR7 559 aa8.96□□□□□ -0.98
SPIDR-228ENST00000588781 NALCNQ8IZF0 1738 aa8.96□□□□□ -0.98
SPIDR-228ENST00000588781 SBNO1A3KN83 1393 aa8.96□□□□□ -0.98
SPIDR-228ENST00000588781 ZBTB7BO15156 539 aaPredicted RBP8.95□□□□□ -0.98
SPIDR-228ENST00000588781 PRR36Q9H6K5 1346 aa8.95□□□□□ -0.98
SPIDR-228ENST00000588781 FLT4P35916 1363 aa8.95□□□□□ -0.98
SPIDR-228ENST00000588781 CHL1O00533 1208 aa8.94□□□□□ -0.98
SPIDR-228ENST00000588781 HMMRO75330 724 aa8.94□□□□□ -0.98
SPIDR-228ENST00000588781 SLC4A3P48751 1232 aa8.94□□□□□ -0.98
SPIDR-228ENST00000588781 EIF4A2Q14240 407 aaKnown RBP8.94□□□□□ -0.98
SPIDR-228ENST00000588781 RRS1Q15050 365 aaKnown RBP8.94□□□□□ -0.98
SPIDR-228ENST00000588781 INTS3Q68E01 1043 aaKnown RBP8.94□□□□□ -0.98
SPIDR-228ENST00000588781 SULT6B1Q6IMI4 303 aa8.94□□□□□ -0.98
SPIDR-228ENST00000588781 RPAP2Q8IXW5 612 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms