RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 LRRCC1Q9C099 1032 aa18.74■□□□□ 0.59
PTPRS-206ENST00000588552 MIS18AQ9NYP9 233 aa18.74■□□□□ 0.59
PTPRS-206ENST00000588552 HIP1O00291 1037 aa18.74■□□□□ 0.59
PTPRS-206ENST00000588552 SIL1Q9H173 461 aa18.74■□□□□ 0.59
PTPRS-206ENST00000588552 ZNF518AQ6AHZ1 1483 aa18.74■□□□□ 0.59
PTPRS-206ENST00000588552 NUCB2P80303 420 aa18.74■□□□□ 0.59
PTPRS-206ENST00000588552 BECN2A8MW95 431 aa18.73■□□□□ 0.59
PTPRS-206ENST00000588552 GOLGA6L19H0YKK7 550 aa18.73■□□□□ 0.59
PTPRS-206ENST00000588552 CCDC158Q5M9N0 1113 aa18.73■□□□□ 0.59
PTPRS-206ENST00000588552 PES1O00541 588 aaKnown RBP18.73■□□□□ 0.59
PTPRS-206ENST00000588552 TTC39AQ5SRH9 613 aa18.72■□□□□ 0.59
PTPRS-206ENST00000588552 USHBP1Q8N6Y0 703 aa18.72■□□□□ 0.59
PTPRS-206ENST00000588552 KIF21AQ7Z4S6 1674 aa18.72■□□□□ 0.59
PTPRS-206ENST00000588552 DCTN1Q14203 1278 aa18.72■□□□□ 0.59
PTPRS-206ENST00000588552 FOSBP53539 338 aa18.71■□□□□ 0.59
PTPRS-206ENST00000588552 BICD2Q8TD16 824 aa18.71■□□□□ 0.59
PTPRS-206ENST00000588552 DISP3Q9P2K9 1392 aa18.71■□□□□ 0.59
PTPRS-206ENST00000588552 DUSP27Q5VZP5 1158 aa18.71■□□□□ 0.58
PTPRS-206ENST00000588552 SAFBQ15424 915 aaKnown RBP eCLIP18.7■□□□□ 0.58
PTPRS-206ENST00000588552 IFT57Q9NWB7 429 aa18.7■□□□□ 0.58
PTPRS-206ENST00000588552 TCEAL9Q9UHQ7 104 aa18.7■□□□□ 0.58
PTPRS-206ENST00000588552 TRAPPC8Q9Y2L5 1435 aa18.7■□□□□ 0.58
PTPRS-206ENST00000588552 EIF4G3O43432 1585 aaKnown RBP18.7■□□□□ 0.58
PTPRS-206ENST00000588552 AMOTQ4VCS5 1084 aa18.7■□□□□ 0.58
PTPRS-206ENST00000588552 NCBP3Q53F19 620 aaKnown RBP18.7■□□□□ 0.58
PTPRS-206ENST00000588552 SRGAP3O43295 1099 aa18.69■□□□□ 0.58
PTPRS-206ENST00000588552 CCDC57Q2TAC2 916 aa18.69■□□□□ 0.58
PTPRS-206ENST00000588552 GNL3LQ9NVN8 582 aaKnown RBP18.69■□□□□ 0.58
PTPRS-206ENST00000588552 NSD2O96028 1365 aa18.69■□□□□ 0.58
PTPRS-206ENST00000588552 WDR62O43379 1518 aa18.69■□□□□ 0.58
PTPRS-206ENST00000588552 ABCC11Q96J66 1382 aa18.68■□□□□ 0.58
PTPRS-206ENST00000588552 SF3B2Q13435 895 aaKnown RBP18.67■□□□□ 0.58
PTPRS-206ENST00000588552 TAF7Q15545 349 aaPredicted RBP18.67■□□□□ 0.58
PTPRS-206ENST00000588552 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.67■□□□□ 0.58
PTPRS-206ENST00000588552 KRT28Q7Z3Y7 464 aa18.67■□□□□ 0.58
PTPRS-206ENST00000588552 TMEM57Q8N5G2 664 aa18.67■□□□□ 0.58
PTPRS-206ENST00000588552 GSE1Q14687 1217 aa18.67■□□□□ 0.58
PTPRS-206ENST00000588552 MPHOSPH8Q99549 860 aa18.67■□□□□ 0.58
PTPRS-206ENST00000588552 STARD3NLO95772 234 aa18.67■□□□□ 0.58
PTPRS-206ENST00000588552 NEK4P51957 841 aa18.66■□□□□ 0.58
PTPRS-206ENST00000588552 SART3Q15020 963 aaKnown RBP18.66■□□□□ 0.58
PTPRS-206ENST00000588552 CHD1LQ86WJ1 897 aa18.66■□□□□ 0.58
PTPRS-206ENST00000588552 ACEP12821 1306 aa18.66■□□□□ 0.58
PTPRS-206ENST00000588552 UHRF1BP1LA0JNW5 1464 aa18.66■□□□□ 0.58
PTPRS-206ENST00000588552 LRPPRCP42704 1394 aaKnown RBP18.66■□□□□ 0.58
PTPRS-206ENST00000588552 RPAP2Q8IXW5 612 aaPredicted RBP18.66■□□□□ 0.58
PTPRS-206ENST00000588552 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.66■□□□□ 0.581e-6■■■■□ 21
PTPRS-206ENST00000588552 TMOD3Q9NYL9 352 aa18.65■□□□□ 0.58
PTPRS-206ENST00000588552 PTCD1O75127 700 aaKnown RBP18.65■□□□□ 0.58
PTPRS-206ENST00000588552 SAMD1Q6SPF0 538 aaPredicted RBP18.65■□□□□ 0.58
PTPRS-206ENST00000588552 CCDC47Q96A33 483 aaKnown RBP18.65■□□□□ 0.58
PTPRS-206ENST00000588552 TPM3P06753 285 aa18.64■□□□□ 0.58
PTPRS-206ENST00000588552 TPM2P07951 284 aa18.64■□□□□ 0.58
PTPRS-206ENST00000588552 HOOK1Q9UJC3 728 aaKnown RBP18.64■□□□□ 0.58
PTPRS-206ENST00000588552 AACSQ86V21 672 aa18.64■□□□□ 0.57
PTPRS-206ENST00000588552 TTC21BQ7Z4L5 1316 aa18.64■□□□□ 0.57
PTPRS-206ENST00000588552 TSR1Q2NL82 804 aaKnown RBP18.64■□□□□ 0.57
PTPRS-206ENST00000588552 MTMR7Q9Y216 660 aa18.63■□□□□ 0.57
PTPRS-206ENST00000588552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.63■□□□□ 0.57
PTPRS-206ENST00000588552 ADAMTS2O95450 1211 aa18.63■□□□□ 0.57
PTPRS-206ENST00000588552 MAP4K4O95819 1239 aaPredicted RBP18.63■□□□□ 0.57
PTPRS-206ENST00000588552 RABEP1Q15276 862 aa18.63■□□□□ 0.57
PTPRS-206ENST00000588552 MPRIPQ6WCQ1 1025 aa18.63■□□□□ 0.57
PTPRS-206ENST00000588552 TCOF1Q13428 1488 aaKnown RBP18.63■□□□□ 0.57
PTPRS-206ENST00000588552 ALDH1L2Q3SY69 923 aa18.63■□□□□ 0.57
PTPRS-206ENST00000588552 SSH1Q8WYL5 1049 aa18.63■□□□□ 0.57
PTPRS-206ENST00000588552 ABCC10Q5T3U5 1492 aa18.63■□□□□ 0.57
PTPRS-206ENST00000588552 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
PTPRS-206ENST00000588552 RARSP54136 660 aaKnown RBP18.62■□□□□ 0.57
PTPRS-206ENST00000588552 SLC3A2P08195 630 aaKnown RBP18.62■□□□□ 0.57
PTPRS-206ENST00000588552 XBP1P17861 261 aa18.62■□□□□ 0.57
PTPRS-206ENST00000588552 NOC3LQ8WTT2 800 aaKnown RBP18.62■□□□□ 0.57
PTPRS-206ENST00000588552 BRMS1Q9HCU9 246 aa18.62■□□□□ 0.57
PTPRS-206ENST00000588552 CEP126Q9P2H0 1117 aa18.62■□□□□ 0.57
PTPRS-206ENST00000588552 MCM2P49736 904 aa18.61■□□□□ 0.57
PTPRS-206ENST00000588552 CCDC73Q6ZRK6 1079 aa18.61■□□□□ 0.57
PTPRS-206ENST00000588552 TPM1P09493 284 aa18.61■□□□□ 0.57
PTPRS-206ENST00000588552 CADPS2Q86UW7 1296 aa18.61■□□□□ 0.57
PTPRS-206ENST00000588552 IL1RAPL2Q9NP60 686 aa18.61■□□□□ 0.57
PTPRS-206ENST00000588552 RRP12Q5JTH9 1297 aaKnown RBP18.61■□□□□ 0.57
PTPRS-206ENST00000588552 ANKRD36BQ8N2N9 1353 aa18.6■□□□□ 0.57
PTPRS-206ENST00000588552 RIMS2Q9UQ26 1411 aa18.6■□□□□ 0.57
PTPRS-206ENST00000588552 BICDL1Q6ZP65 573 aa18.6■□□□□ 0.57
PTPRS-206ENST00000588552 NKTRP30414 1462 aaKnown RBP18.6■□□□□ 0.57
PTPRS-206ENST00000588552 NUP160Q12769 1436 aa18.6■□□□□ 0.57
PTPRS-206ENST00000588552 RALGAPBQ86X10 1494 aa18.59■□□□□ 0.57
PTPRS-206ENST00000588552 ABCC2Q92887 1545 aa18.59■□□□□ 0.57
PTPRS-206ENST00000588552 FKBP4Q02790 459 aaKnown RBP eCLIP18.59■□□□□ 0.57
PTPRS-206ENST00000588552 LARP1Q6PKG0 1096 aaKnown RBP18.59■□□□□ 0.57
PTPRS-206ENST00000588552 KDM4AO75164 1064 aa18.59■□□□□ 0.57
PTPRS-206ENST00000588552 PPP1R1BQ9UD71 204 aaPredicted RBP18.59■□□□□ 0.57
PTPRS-206ENST00000588552 CCDC85AQ96PX6 553 aaPredicted RBP18.58■□□□□ 0.57
PTPRS-206ENST00000588552 SASS6Q6UVJ0 657 aa18.58■□□□□ 0.56
PTPRS-206ENST00000588552 MAPKBP1O60336 1514 aa18.57■□□□□ 0.56
PTPRS-206ENST00000588552 ANKRD20A12PQ8NF67 263 aa18.57■□□□□ 0.56
PTPRS-206ENST00000588552 CEP89Q96ST8 783 aa18.57■□□□□ 0.56
PTPRS-206ENST00000588552 PRAG1Q86YV5 1406 aa18.57■□□□□ 0.56
PTPRS-206ENST00000588552 ZSCAN25Q6NSZ9 544 aa18.57■□□□□ 0.56
PTPRS-206ENST00000588552 NACAP1Q9BZK3 213 aa18.57■□□□□ 0.56
PTPRS-206ENST00000588552 CFAP43Q8NDM7 1665 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms