RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 LMOD3Q0VAK6 560 aa16.64■□□□□ 0.25
TMED1-204ENST00000588289 CCDC146Q8IYE0 955 aa16.64■□□□□ 0.25
TMED1-204ENST00000588289 PEAK1Q9H792 1746 aa16.64■□□□□ 0.25
TMED1-204ENST00000588289 NFAT5O94916 1531 aa16.64■□□□□ 0.25
TMED1-204ENST00000588289 USP19O94966 1318 aa16.64■□□□□ 0.25
TMED1-204ENST00000588289 APAF1O14727 1248 aa16.63■□□□□ 0.25
TMED1-204ENST00000588289 CALD1Q05682 793 aaKnown RBP16.63■□□□□ 0.25
TMED1-204ENST00000588289 NUTM2GQ5VZR2 741 aa16.63■□□□□ 0.25
TMED1-204ENST00000588289 FAM208AQ9UK61 1670 aaKnown RBP16.62■□□□□ 0.25
TMED1-204ENST00000588289 IL13P35225 146 aa16.62■□□□□ 0.25
TMED1-204ENST00000588289 XPCQ01831 940 aaPredicted RBP16.62■□□□□ 0.25
TMED1-204ENST00000588289 GOLGA2Q08379 1002 aa16.62■□□□□ 0.25
TMED1-204ENST00000588289 CCDC27Q2M243 656 aa16.62■□□□□ 0.25
TMED1-204ENST00000588289 SPATA31A3Q5VYP0 1347 aa16.62■□□□□ 0.25
TMED1-204ENST00000588289 HAP1P54257 671 aaPredicted RBP16.61■□□□□ 0.25
TMED1-204ENST00000588289 ROBO1Q9Y6N7 1651 aa16.61■□□□□ 0.25
TMED1-204ENST00000588289 RGPD1P0DJD0 1748 aa16.61■□□□□ 0.25
TMED1-204ENST00000588289 GCP02774 474 aa16.6■□□□□ 0.25
TMED1-204ENST00000588289 HOXC9P31274 260 aa16.6■□□□□ 0.25
TMED1-204ENST00000588289 TCP11L2Q8N4U5 519 aa16.6■□□□□ 0.25
TMED1-204ENST00000588289 IP6K1Q92551 441 aa16.6■□□□□ 0.25
TMED1-204ENST00000588289 SALL2Q9Y467 1007 aaPredicted RBP16.6■□□□□ 0.25
TMED1-204ENST00000588289 EIF4A2Q14240 407 aaKnown RBP16.59■□□□□ 0.25
TMED1-204ENST00000588289 SOS2Q07890 1332 aaPredicted RBP16.59■□□□□ 0.25
TMED1-204ENST00000588289 AHDC1Q5TGY3 1603 aaPredicted RBP16.59■□□□□ 0.25
TMED1-204ENST00000588289 E9PSI1 815 aa16.58■□□□□ 0.24
TMED1-204ENST00000588289 PRKAR2BP31323 418 aa16.58■□□□□ 0.24
TMED1-204ENST00000588289 WDR63Q8IWG1 891 aa16.58■□□□□ 0.24
TMED1-204ENST00000588289 CRYBG1Q9Y4K1 1723 aa16.57■□□□□ 0.24
TMED1-204ENST00000588289 HSP90AB2PQ58FF8 381 aa16.57■□□□□ 0.24
TMED1-204ENST00000588289 RSPH6AQ9H0K4 717 aa16.57■□□□□ 0.24
TMED1-204ENST00000588289 ZBTB7CA1YPR0 619 aa16.56■□□□□ 0.24
TMED1-204ENST00000588289 FBLN1P23142 703 aa16.56■□□□□ 0.24
TMED1-204ENST00000588289 LRRC59Q96AG4 307 aaKnown RBP16.56■□□□□ 0.24
TMED1-204ENST00000588289 MYH16Q9H6N6 1097 aa16.56■□□□□ 0.24
TMED1-204ENST00000588289 DLG5Q8TDM6 1919 aa16.55■□□□□ 0.24
TMED1-204ENST00000588289 ARHGEF25Q86VW2 580 aa16.55■□□□□ 0.24
TMED1-204ENST00000588289 PLEKHF1Q96S99 279 aa16.55■□□□□ 0.24
TMED1-204ENST00000588289 PHLPP1O60346 1717 aa16.55■□□□□ 0.24
TMED1-204ENST00000588289 HMOX1P09601 288 aa16.54■□□□□ 0.24
TMED1-204ENST00000588289 TMPOP42166 694 aaKnown RBP16.54■□□□□ 0.24
TMED1-204ENST00000588289 NEUROD2Q15784 382 aa16.54■□□□□ 0.24
TMED1-204ENST00000588289 NFE2L2Q16236 605 aa16.54■□□□□ 0.24
TMED1-204ENST00000588289 SULT6B1Q6IMI4 303 aa16.54■□□□□ 0.24
TMED1-204ENST00000588289 ABCA3Q99758 1704 aa16.53■□□□□ 0.24
TMED1-204ENST00000588289 CPDO75976 1380 aa16.53■□□□□ 0.24
TMED1-204ENST00000588289 IGSF1Q8N6C5 1336 aa16.53■□□□□ 0.24
TMED1-204ENST00000588289 ZNF521Q96K83 1311 aa16.53■□□□□ 0.24
TMED1-204ENST00000588289 RIPK4P57078 832 aa16.53■□□□□ 0.24
TMED1-204ENST00000588289 WWC1Q8IX03 1113 aa16.53■□□□□ 0.24
TMED1-204ENST00000588289 GAS2L2Q8NHY3 880 aa16.53■□□□□ 0.24
TMED1-204ENST00000588289 KDRP35968 1356 aa16.52■□□□□ 0.24
TMED1-204ENST00000588289 IL16Q14005 1332 aa16.52■□□□□ 0.24
TMED1-204ENST00000588289 RGPD5Q99666 1765 aa16.52■□□□□ 0.24
TMED1-204ENST00000588289 PLEKHG2Q9H7P9 1386 aa16.51■□□□□ 0.23
TMED1-204ENST00000588289 COL22A1Q8NFW1 1626 aaPredicted RBP16.5■□□□□ 0.23
TMED1-204ENST00000588289 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.5■□□□□ 0.23
TMED1-204ENST00000588289 RTF1Q92541 710 aaKnown RBP16.5■□□□□ 0.23
TMED1-204ENST00000588289 DDX17Q92841 729 aaKnown RBP16.5■□□□□ 0.23
TMED1-204ENST00000588289 GTF3C3Q9Y5Q9 886 aa16.5■□□□□ 0.23
TMED1-204ENST00000588289 SLFN5Q08AF3 891 aa16.49■□□□□ 0.23
TMED1-204ENST00000588289 UPF1Q92900 1129 aaKnown RBP eCLIP16.49■□□□□ 0.23
TMED1-204ENST00000588289 LTV1Q96GA3 475 aaPredicted RBP16.49■□□□□ 0.23
TMED1-204ENST00000588289 RRP7AQ9Y3A4 280 aaKnown RBP16.49■□□□□ 0.23
TMED1-204ENST00000588289 CAMTA1Q9Y6Y1 1673 aa16.49■□□□□ 0.23
TMED1-204ENST00000588289 PLEKHG5O94827 1062 aa16.48■□□□□ 0.23
TMED1-204ENST00000588289 ZC3H6P61129 1189 aaKnown RBP16.48■□□□□ 0.23
TMED1-204ENST00000588289 ANKRD24Q8TF21 1146 aa16.48■□□□□ 0.23
TMED1-204ENST00000588289 EYA1Q99502 592 aa16.48■□□□□ 0.23
TMED1-204ENST00000588289 PRDM11Q9NQV5 511 aa16.48■□□□□ 0.23
TMED1-204ENST00000588289 RCAN3Q9UKA8 241 aa16.48■□□□□ 0.23
TMED1-204ENST00000588289 COL18A1P39060 1754 aa16.47■□□□□ 0.23
TMED1-204ENST00000588289 CT47B1P0C2W7 299 aaPredicted RBP16.47■□□□□ 0.23
TMED1-204ENST00000588289 CSB-PGBD3P0DP91 1061 aa16.47■□□□□ 0.23
TMED1-204ENST00000588289 ERICH6BQ5W0A0 696 aa16.47■□□□□ 0.23
TMED1-204ENST00000588289 RGPD2P0DJD1 1756 aa16.46■□□□□ 0.23
TMED1-204ENST00000588289 SENP3-EIF4A1A0A087X0R7 540 aa16.46■□□□□ 0.23
TMED1-204ENST00000588289 HTATSF1O43719 755 aaKnown RBP16.46■□□□□ 0.23
TMED1-204ENST00000588289 AMOTQ4VCS5 1084 aa16.46■□□□□ 0.23
TMED1-204ENST00000588289 COL14A1Q05707 1796 aaKnown RBP16.46■□□□□ 0.22
TMED1-204ENST00000588289 GNAI1P63096 354 aa16.45■□□□□ 0.22
TMED1-204ENST00000588289 SUPT16HQ9Y5B9 1047 aaKnown RBP16.45■□□□□ 0.22
TMED1-204ENST00000588289 KIAA0232Q92628 1395 aa16.45■□□□□ 0.22
TMED1-204ENST00000588289 ERBB3P21860 1342 aa16.45■□□□□ 0.22
TMED1-204ENST00000588289 PLEKHO1Q53GL0 409 aaPredicted RBP16.44■□□□□ 0.22
TMED1-204ENST00000588289 DUSP27Q5VZP5 1158 aa16.44■□□□□ 0.22
TMED1-204ENST00000588289 CDCA7LQ96GN5 454 aa16.44■□□□□ 0.22
TMED1-204ENST00000588289 LMO7Q8WWI1 1683 aa16.43■□□□□ 0.22
TMED1-204ENST00000588289 RAPGEF4Q8WZA2 1011 aa16.43■□□□□ 0.22
TMED1-204ENST00000588289 COL16A1Q07092 1604 aaPredicted RBP16.43■□□□□ 0.22
TMED1-204ENST00000588289 PARP4Q9UKK3 1724 aaKnown RBP16.42■□□□□ 0.22
TMED1-204ENST00000588289 AEBP1Q8IUX7 1158 aa16.42■□□□□ 0.22
TMED1-204ENST00000588289 TRMT2AQ8IZ69 625 aaKnown RBP16.42■□□□□ 0.22
TMED1-204ENST00000588289 C1orf141Q5JVX7 400 aa16.41■□□□□ 0.22
TMED1-204ENST00000588289 CABLES1Q8TDN4 633 aa16.41■□□□□ 0.22
TMED1-204ENST00000588289 PHACTR3Q96KR7 559 aa16.41■□□□□ 0.22
TMED1-204ENST00000588289 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
TMED1-204ENST00000588289 NLRP2Q9NX02 1062 aa16.41■□□□□ 0.22
TMED1-204ENST00000588289 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
TMED1-204ENST00000588289 NCAPD2Q15021 1401 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms