RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 LMOD2Q6P5Q4 547 aa13.85□□□□□ -0.19
CHMP1B-202ENST00000588284 CCDC146Q8IYE0 955 aa13.85□□□□□ -0.19
CHMP1B-202ENST00000588284 BRINP3Q76B58 766 aa13.84□□□□□ -0.19
CHMP1B-202ENST00000588284 SALL2Q9Y467 1007 aaPredicted RBP13.84□□□□□ -0.19
CHMP1B-202ENST00000588284 COL3A1P02461 1466 aaPredicted RBP13.84□□□□□ -0.19
CHMP1B-202ENST00000588284 MAP3K19Q56UN5 1328 aa13.84□□□□□ -0.19
CHMP1B-202ENST00000588284 XIRP1Q702N8 1843 aaKnown RBP13.83□□□□□ -0.2
CHMP1B-202ENST00000588284 SOX12O15370 315 aa13.83□□□□□ -0.2
CHMP1B-202ENST00000588284 XPCQ01831 940 aaPredicted RBP13.83□□□□□ -0.2
CHMP1B-202ENST00000588284 MAPK8IP3Q9UPT6 1336 aa13.83□□□□□ -0.2
CHMP1B-202ENST00000588284 FLT4P35916 1363 aa13.83□□□□□ -0.2
CHMP1B-202ENST00000588284 GCP02774 474 aa13.82□□□□□ -0.2
CHMP1B-202ENST00000588284 TCP11L2Q8N4U5 519 aa13.82□□□□□ -0.2
CHMP1B-202ENST00000588284 PIK3C2AO00443 1686 aa13.82□□□□□ -0.2
CHMP1B-202ENST00000588284 USP54Q70EL1 1684 aa13.82□□□□□ -0.2
CHMP1B-202ENST00000588284 GOLGA2Q08379 1002 aa13.81□□□□□ -0.2
CHMP1B-202ENST00000588284 CCDC27Q2M243 656 aa13.81□□□□□ -0.2
CHMP1B-202ENST00000588284 HSP90AB2PQ58FF8 381 aa13.81□□□□□ -0.2
CHMP1B-202ENST00000588284 IP6K1Q92551 441 aa13.81□□□□□ -0.2
CHMP1B-202ENST00000588284 SHPRHQ149N8 1683 aa13.81□□□□□ -0.2
CHMP1B-202ENST00000588284 EIF4A2Q14240 407 aaKnown RBP13.8□□□□□ -0.2
CHMP1B-202ENST00000588284 PLEKHF1Q96S99 279 aa13.8□□□□□ -0.2
CHMP1B-202ENST00000588284 USP19O94966 1318 aa13.8□□□□□ -0.2
CHMP1B-202ENST00000588284 SPATA31A3Q5VYP0 1347 aa13.8□□□□□ -0.2
CHMP1B-202ENST00000588284 ARHGEF10O15013 1369 aa13.8□□□□□ -0.2
CHMP1B-202ENST00000588284 HOXC9P31274 260 aa13.79□□□□□ -0.2
CHMP1B-202ENST00000588284 SOS2Q07890 1332 aaPredicted RBP13.79□□□□□ -0.2
CHMP1B-202ENST00000588284 RTL1A6NKG5 1358 aa13.79□□□□□ -0.2
CHMP1B-202ENST00000588284 ARHGEF25Q86VW2 580 aa13.78□□□□□ -0.2
CHMP1B-202ENST00000588284 WDR63Q8IWG1 891 aa13.78□□□□□ -0.2
CHMP1B-202ENST00000588284 RSPH6AQ9H0K4 717 aa13.78□□□□□ -0.2
CHMP1B-202ENST00000588284 SENP3-EIF4A1A0A087X0R7 540 aa13.77□□□□□ -0.21
CHMP1B-202ENST00000588284 PRKAR2BP31323 418 aa13.77□□□□□ -0.21
CHMP1B-202ENST00000588284 TMPOP42166 694 aaKnown RBP13.77□□□□□ -0.21
CHMP1B-202ENST00000588284 LTBP4Q8N2S1 1624 aa13.77□□□□□ -0.21
CHMP1B-202ENST00000588284 DDX17Q92841 729 aaKnown RBP13.77□□□□□ -0.21
CHMP1B-202ENST00000588284 ZNF521Q96K83 1311 aa13.77□□□□□ -0.21
CHMP1B-202ENST00000588284 TRPM3Q9HCF6 1732 aaPredicted RBP13.76□□□□□ -0.21
CHMP1B-202ENST00000588284 IQSEC2Q5JU85 1478 aa13.76□□□□□ -0.21
CHMP1B-202ENST00000588284 TNS3Q68CZ2 1445 aa13.76□□□□□ -0.21
CHMP1B-202ENST00000588284 E9PSI1 815 aa13.76□□□□□ -0.21
CHMP1B-202ENST00000588284 TOM1O60784 492 aa13.76□□□□□ -0.21
CHMP1B-202ENST00000588284 HMOX1P09601 288 aa13.76□□□□□ -0.21
CHMP1B-202ENST00000588284 NEUROD2Q15784 382 aa13.76□□□□□ -0.21
CHMP1B-202ENST00000588284 WWC1Q8IX03 1113 aa13.76□□□□□ -0.21
CHMP1B-202ENST00000588284 PXDNQ92626 1479 aa13.75□□□□□ -0.21
CHMP1B-202ENST00000588284 NEFLP07196 543 aa13.75□□□□□ -0.21
CHMP1B-202ENST00000588284 SLFN5Q08AF3 891 aa13.75□□□□□ -0.21
CHMP1B-202ENST00000588284 SULT6B1Q6IMI4 303 aa13.75□□□□□ -0.21
CHMP1B-202ENST00000588284 SLIT3O75094 1523 aa13.74□□□□□ -0.21
CHMP1B-202ENST00000588284 RIPK4P57078 832 aa13.74□□□□□ -0.21
CHMP1B-202ENST00000588284 LMOD3Q0VAK6 560 aa13.74□□□□□ -0.21
CHMP1B-202ENST00000588284 NFE2L2Q16236 605 aa13.74□□□□□ -0.21
CHMP1B-202ENST00000588284 LRRC59Q96AG4 307 aaKnown RBP13.74□□□□□ -0.21
CHMP1B-202ENST00000588284 GTF3C3Q9Y5Q9 886 aa13.74□□□□□ -0.21
CHMP1B-202ENST00000588284 ZBTB7CA1YPR0 619 aa13.73□□□□□ -0.21
CHMP1B-202ENST00000588284 CALD1Q05682 793 aaKnown RBP13.73□□□□□ -0.21
CHMP1B-202ENST00000588284 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
CHMP1B-202ENST00000588284 TRMT2AQ8IZ69 625 aaKnown RBP13.73□□□□□ -0.21
CHMP1B-202ENST00000588284 CDCA7LQ96GN5 454 aa13.73□□□□□ -0.21
CHMP1B-202ENST00000588284 EYA1Q99502 592 aa13.73□□□□□ -0.21
CHMP1B-202ENST00000588284 RRP7AQ9Y3A4 280 aaKnown RBP13.73□□□□□ -0.21
CHMP1B-202ENST00000588284 NFAT5O94916 1531 aa13.73□□□□□ -0.21
CHMP1B-202ENST00000588284 MARF1Q9Y4F3 1742 aaKnown RBP13.73□□□□□ -0.21
CHMP1B-202ENST00000588284 ALS2Q96Q42 1657 aa13.72□□□□□ -0.21
CHMP1B-202ENST00000588284 IGSF1Q8N6C5 1336 aa13.72□□□□□ -0.21
CHMP1B-202ENST00000588284 SUPT16HQ9Y5B9 1047 aaKnown RBP13.72□□□□□ -0.21
CHMP1B-202ENST00000588284 IL16Q14005 1332 aa13.71□□□□□ -0.21
CHMP1B-202ENST00000588284 PEAK1Q9H792 1746 aa13.71□□□□□ -0.21
CHMP1B-202ENST00000588284 PLEKHG5O94827 1062 aa13.71□□□□□ -0.21
CHMP1B-202ENST00000588284 ZC3H6P61129 1189 aaKnown RBP13.71□□□□□ -0.21
CHMP1B-202ENST00000588284 LTV1Q96GA3 475 aaPredicted RBP13.71□□□□□ -0.21
CHMP1B-202ENST00000588284 PHACTR3Q96KR7 559 aa13.71□□□□□ -0.21
CHMP1B-202ENST00000588284 HAP1P54257 671 aaPredicted RBP13.7□□□□□ -0.22
CHMP1B-202ENST00000588284 DUSP27Q5VZP5 1158 aa13.7□□□□□ -0.22
CHMP1B-202ENST00000588284 MYH16Q9H6N6 1097 aa13.7□□□□□ -0.22
CHMP1B-202ENST00000588284 TRIM35Q9UPQ4 493 aa13.69□□□□□ -0.22
CHMP1B-202ENST00000588284 CPDO75976 1380 aa13.69□□□□□ -0.22
CHMP1B-202ENST00000588284 KDRP35968 1356 aa13.69□□□□□ -0.22
CHMP1B-202ENST00000588284 PHRF1Q9P1Y6 1649 aaKnown RBP13.68□□□□□ -0.22
CHMP1B-202ENST00000588284 AEBP1Q8IUX7 1158 aa13.68□□□□□ -0.22
CHMP1B-202ENST00000588284 GAS2L2Q8NHY3 880 aa13.68□□□□□ -0.22
CHMP1B-202ENST00000588284 CABLES1Q8TDN4 633 aa13.68□□□□□ -0.22
CHMP1B-202ENST00000588284 ANKRD24Q8TF21 1146 aa13.68□□□□□ -0.22
CHMP1B-202ENST00000588284 RCAN3Q9UKA8 241 aa13.68□□□□□ -0.22
CHMP1B-202ENST00000588284 MED1Q15648 1581 aaPredicted RBP13.67□□□□□ -0.22
CHMP1B-202ENST00000588284 HTATSF1O43719 755 aaKnown RBP13.67□□□□□ -0.22
CHMP1B-202ENST00000588284 NHSL1Q5SYE7 1610 aa13.66□□□□□ -0.22
CHMP1B-202ENST00000588284 NBPF6Q5VWK0 638 aa13.66□□□□□ -0.22
CHMP1B-202ENST00000588284 ERICH6BQ5W0A0 696 aa13.66□□□□□ -0.22
CHMP1B-202ENST00000588284 NBPF4Q96M43 638 aa13.66□□□□□ -0.22
CHMP1B-202ENST00000588284 LTN1O94822 1766 aa13.66□□□□□ -0.22
CHMP1B-202ENST00000588284 UBAP1LF5GYI3 381 aa13.65□□□□□ -0.22
CHMP1B-202ENST00000588284 AXIN2Q9Y2T1 843 aa13.65□□□□□ -0.22
CHMP1B-202ENST00000588284 ABCC6O95255 1503 aa13.64□□□□□ -0.23
CHMP1B-202ENST00000588284 RGPD1P0DJD0 1748 aa13.64□□□□□ -0.23
CHMP1B-202ENST00000588284 CT47B1P0C2W7 299 aaPredicted RBP13.64□□□□□ -0.23
CHMP1B-202ENST00000588284 GNAI1P63096 354 aa13.64□□□□□ -0.23
CHMP1B-202ENST00000588284 AMOTQ4VCS5 1084 aa13.64□□□□□ -0.23
CHMP1B-202ENST00000588284 PLEKHO1Q53GL0 409 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms