RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 MYT1Q01538 1121 aa13.6□□□□□ -0.23
APOC1-201ENST00000586638 OVOS2A0A0J9YW53 1432 aa13.59□□□□□ -0.23
APOC1-201ENST00000586638 TNS3Q68CZ2 1445 aa13.59□□□□□ -0.23
APOC1-201ENST00000586638 OVOS2Q6IE36 1432 aa13.59□□□□□ -0.23
APOC1-201ENST00000586638 TTC21BQ7Z4L5 1316 aa13.59□□□□□ -0.23
APOC1-201ENST00000586638 ARHGEF10O15013 1369 aa13.58□□□□□ -0.23
APOC1-201ENST00000586638 SSH2Q76I76 1423 aa13.58□□□□□ -0.24
APOC1-201ENST00000586638 BAG6P46379 1132 aa13.58□□□□□ -0.24
APOC1-201ENST00000586638 MTHFSP49914 203 aa13.58□□□□□ -0.24
APOC1-201ENST00000586638 FAM98CQ17RN3 349 aaKnown RBP13.58□□□□□ -0.24
APOC1-201ENST00000586638 ADAMTS8Q9UP79 889 aa13.58□□□□□ -0.24
APOC1-201ENST00000586638 KIF1AQ12756 1690 aa13.58□□□□□ -0.24
APOC1-201ENST00000586638 SMG6Q86US8 1419 aaKnown RBP13.57□□□□□ -0.24
APOC1-201ENST00000586638 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
APOC1-201ENST00000586638 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
APOC1-201ENST00000586638 NGDNQ8NEJ9 315 aaKnown RBP13.56□□□□□ -0.24
APOC1-201ENST00000586638 GTF3C3Q9Y5Q9 886 aa13.56□□□□□ -0.24
APOC1-201ENST00000586638 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.56□□□□□ -0.24
APOC1-201ENST00000586638 PEAK1Q9H792 1746 aa13.56□□□□□ -0.24
APOC1-201ENST00000586638 PSDA5PKW4 1024 aaPredicted RBP13.55□□□□□ -0.24
APOC1-201ENST00000586638 COG3Q96JB2 828 aa13.55□□□□□ -0.24
APOC1-201ENST00000586638 CFAP53Q96M91 514 aa13.55□□□□□ -0.24
APOC1-201ENST00000586638 TRPM3Q9HCF6 1732 aaPredicted RBP13.54□□□□□ -0.24
APOC1-201ENST00000586638 FBLN1P23142 703 aa13.54□□□□□ -0.24
APOC1-201ENST00000586638 CCDC146Q8IYE0 955 aa13.54□□□□□ -0.24
APOC1-201ENST00000586638 SALL2Q9Y467 1007 aaPredicted RBP13.54□□□□□ -0.24
APOC1-201ENST00000586638 EN1Q05925 392 aaPredicted RBP13.53□□□□□ -0.24
APOC1-201ENST00000586638 TTC21AQ8NDW8 1320 aa13.53□□□□□ -0.24
APOC1-201ENST00000586638 PAK3O75914 559 aaPredicted RBP13.52□□□□□ -0.25
APOC1-201ENST00000586638 FAM182BQ5T319 152 aa13.52□□□□□ -0.25
APOC1-201ENST00000586638 EMILIN1Q9Y6C2 1016 aa13.52□□□□□ -0.25
APOC1-201ENST00000586638 AATKQ6ZMQ8 1374 aa13.52□□□□□ -0.25
APOC1-201ENST00000586638 USP31Q70CQ4 1352 aa13.5□□□□□ -0.25
APOC1-201ENST00000586638 SPATA31A5Q5VU36 1347 aa13.5□□□□□ -0.25
APOC1-201ENST00000586638 SPATA31A7Q8IWB4 1347 aa13.5□□□□□ -0.25
APOC1-201ENST00000586638 POLKQ9UBT6 870 aa13.5□□□□□ -0.25
APOC1-201ENST00000586638 BRWD3Q6RI45 1802 aa13.5□□□□□ -0.25
APOC1-201ENST00000586638 LTN1O94822 1766 aa13.5□□□□□ -0.25
APOC1-201ENST00000586638 LRP5O75197 1615 aa13.5□□□□□ -0.25
APOC1-201ENST00000586638 PPM1GO15355 546 aaPredicted RBP13.49□□□□□ -0.25
APOC1-201ENST00000586638 R3HDM1Q15032 1099 aaKnown RBP13.49□□□□□ -0.25
APOC1-201ENST00000586638 RRS1Q15050 365 aaKnown RBP13.49□□□□□ -0.25
APOC1-201ENST00000586638 PRDM11Q9NQV5 511 aa13.49□□□□□ -0.25
APOC1-201ENST00000586638 NWD2Q9ULI1 1742 aa13.47□□□□□ -0.25
APOC1-201ENST00000586638 ALS2Q96Q42 1657 aa13.47□□□□□ -0.25
APOC1-201ENST00000586638 U2SURPO15042 1029 aaKnown RBP13.47□□□□□ -0.25
APOC1-201ENST00000586638 SOX12O15370 315 aa13.47□□□□□ -0.25
APOC1-201ENST00000586638 EZH2Q15910 746 aaKnown RBP13.47□□□□□ -0.25
APOC1-201ENST00000586638 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
APOC1-201ENST00000586638 RGPD1P0DJD0 1748 aa13.47□□□□□ -0.25
APOC1-201ENST00000586638 NFAT5O94916 1531 aa13.46□□□□□ -0.25
APOC1-201ENST00000586638 APAF1O14727 1248 aa13.46□□□□□ -0.25
APOC1-201ENST00000586638 DIAPH1O60610 1272 aaKnown RBP13.46□□□□□ -0.25
APOC1-201ENST00000586638 U2AF1L5P0DN76 240 aaPredicted RBP13.46□□□□□ -0.25
APOC1-201ENST00000586638 U2AF1Q01081 240 aaKnown RBP eCLIP13.46□□□□□ -0.25
APOC1-201ENST00000586638 NUTM2GQ5VZR2 741 aa13.46□□□□□ -0.25
APOC1-201ENST00000586638 FAM196AQ6ZSG2 479 aa13.46□□□□□ -0.25
APOC1-201ENST00000586638 STRN4Q9NRL3 753 aa13.46□□□□□ -0.25
APOC1-201ENST00000586638 PLCH1Q4KWH8 1693 aa13.46□□□□□ -0.26
APOC1-201ENST00000586638 TRIM37O94972 964 aa13.45□□□□□ -0.26
APOC1-201ENST00000586638 EVA1CP58658 441 aa13.45□□□□□ -0.26
APOC1-201ENST00000586638 ZC3H6P61129 1189 aaKnown RBP13.45□□□□□ -0.26
APOC1-201ENST00000586638 CHRNA2Q15822 529 aa13.45□□□□□ -0.26
APOC1-201ENST00000586638 SLIT3O75094 1523 aa13.44□□□□□ -0.26
APOC1-201ENST00000586638 SPATA31A1Q5TZJ5 1347 aa13.44□□□□□ -0.26
APOC1-201ENST00000586638 APBA3O96018 575 aa13.44□□□□□ -0.26
APOC1-201ENST00000586638 RUNDC1Q96C34 613 aa13.44□□□□□ -0.26
APOC1-201ENST00000586638 CAMKK2Q96RR4 588 aa13.44□□□□□ -0.26
APOC1-201ENST00000586638 ZNF521Q96K83 1311 aa13.43□□□□□ -0.26
APOC1-201ENST00000586638 PHRF1Q9P1Y6 1649 aaKnown RBP13.43□□□□□ -0.26
APOC1-201ENST00000586638 NLRP6P59044 892 aa13.43□□□□□ -0.26
APOC1-201ENST00000586638 ABTB2Q8N961 1025 aa13.43□□□□□ -0.26
APOC1-201ENST00000586638 CDCA7LQ96GN5 454 aa13.43□□□□□ -0.26
APOC1-201ENST00000586638 USP35Q9P2H5 1018 aa13.43□□□□□ -0.26
APOC1-201ENST00000586638 KIAA0232Q92628 1395 aa13.43□□□□□ -0.26
APOC1-201ENST00000586638 MAP3K19Q56UN5 1328 aa13.42□□□□□ -0.26
APOC1-201ENST00000586638 CRYBG1Q9Y4K1 1723 aa13.42□□□□□ -0.26
APOC1-201ENST00000586638 PDE3BQ13370 1112 aa13.42□□□□□ -0.26
APOC1-201ENST00000586638 RRP7AQ9Y3A4 280 aaKnown RBP13.42□□□□□ -0.26
APOC1-201ENST00000586638 COL14A1Q05707 1796 aaKnown RBP13.42□□□□□ -0.26
APOC1-201ENST00000586638 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
APOC1-201ENST00000586638 IL13P35225 146 aa13.41□□□□□ -0.26
APOC1-201ENST00000586638 SUPT16HQ9Y5B9 1047 aaKnown RBP13.41□□□□□ -0.26
APOC1-201ENST00000586638 NBPF14Q5TI25 921 aa13.4□□□□□ -0.26
APOC1-201ENST00000586638 BARGINQ6ZT62 677 aa13.4□□□□□ -0.26
APOC1-201ENST00000586638 FLT4P35916 1363 aa13.4□□□□□ -0.26
APOC1-201ENST00000586638 DISP2A7MBM2 1401 aa13.39□□□□□ -0.27
APOC1-201ENST00000586638 ABCA3Q99758 1704 aa13.39□□□□□ -0.27
APOC1-201ENST00000586638 HMOX1P09601 288 aa13.39□□□□□ -0.27
APOC1-201ENST00000586638 EIF4A2Q14240 407 aaKnown RBP13.39□□□□□ -0.27
APOC1-201ENST00000586638 NEUROD2Q15784 382 aa13.39□□□□□ -0.27
APOC1-201ENST00000586638 TCP11L2Q8N4U5 519 aa13.39□□□□□ -0.27
APOC1-201ENST00000586638 PLEKHF1Q96S99 279 aa13.39□□□□□ -0.27
APOC1-201ENST00000586638 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
APOC1-201ENST00000586638 NRAPQ86VF7 1730 aa13.39□□□□□ -0.27
APOC1-201ENST00000586638 MAPK8IP3Q9UPT6 1336 aa13.39□□□□□ -0.27
APOC1-201ENST00000586638 RTL1A6NKG5 1358 aa13.38□□□□□ -0.27
APOC1-201ENST00000586638 NEFLP07196 543 aa13.38□□□□□ -0.27
APOC1-201ENST00000586638 PRKAR2BP31323 418 aa13.38□□□□□ -0.27
APOC1-201ENST00000586638 HSP90AB2PQ58FF8 381 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms