RNA–Protein interactions for RNA: ENST00000586443.1

GRN-205, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 1,557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-205ENST00000586443 ALS2Q96Q42 1657 aa24.73■■□□□ 1.55
GRN-205ENST00000586443 NEFMP07197 916 aa24.72■■□□□ 1.55
GRN-205ENST00000586443 TMPOP42166 694 aaKnown RBP24.71■■□□□ 1.55
GRN-205ENST00000586443 HSP90AB2PQ58FF8 381 aa24.71■■□□□ 1.55
GRN-205ENST00000586443 RRP7AQ9Y3A4 280 aaKnown RBP24.71■■□□□ 1.55
GRN-205ENST00000586443 PHRF1Q9P1Y6 1649 aaKnown RBP24.71■■□□□ 1.55
GRN-205ENST00000586443 NPHP3Q7Z494 1330 aa24.71■■□□□ 1.55
GRN-205ENST00000586443 PRKAR2BP31323 418 aa24.71■■□□□ 1.55
GRN-205ENST00000586443 AMPHP49418 695 aa24.71■■□□□ 1.55
GRN-205ENST00000586443 RCAN3Q9UKA8 241 aa24.7■■□□□ 1.54
GRN-205ENST00000586443 LTN1O94822 1766 aa24.7■■□□□ 1.54
GRN-205ENST00000586443 USP19O94966 1318 aa24.69■■□□□ 1.54
GRN-205ENST00000586443 XPCQ01831 940 aaPredicted RBP24.69■■□□□ 1.54
GRN-205ENST00000586443 NEUROD2Q15784 382 aa24.69■■□□□ 1.54
GRN-205ENST00000586443 ERICH6BQ5W0A0 696 aa24.68■■□□□ 1.54
GRN-205ENST00000586443 ARHGEF10O15013 1369 aa24.68■■□□□ 1.54
GRN-205ENST00000586443 HMOX1P09601 288 aa24.67■■□□□ 1.54
GRN-205ENST00000586443 HOXC9P31274 260 aa24.67■■□□□ 1.54
GRN-205ENST00000586443 PXDNQ92626 1479 aa24.66■■□□□ 1.54
GRN-205ENST00000586443 SPINK5Q9NQ38 1064 aaPredicted RBP24.66■■□□□ 1.54
GRN-205ENST00000586443 BRINP3Q76B58 766 aa24.63■■□□□ 1.53
GRN-205ENST00000586443 TRIM35Q9UPQ4 493 aa24.63■■□□□ 1.53
GRN-205ENST00000586443 TNS3Q68CZ2 1445 aa24.63■■□□□ 1.53
GRN-205ENST00000586443 RIPK4P57078 832 aa24.63■■□□□ 1.53
GRN-205ENST00000586443 NFE2L2Q16236 605 aa24.63■■□□□ 1.53
GRN-205ENST00000586443 SLAIN2Q9P270 581 aa24.63■■□□□ 1.53
GRN-205ENST00000586443 KDRP35968 1356 aa24.62■■□□□ 1.53
GRN-205ENST00000586443 GCP02774 474 aa24.62■■□□□ 1.53
GRN-205ENST00000586443 IP6K1Q92551 441 aa24.62■■□□□ 1.53
GRN-205ENST00000586443 PHACTR3Q96KR7 559 aa24.62■■□□□ 1.53
GRN-205ENST00000586443 IL16Q14005 1332 aa24.62■■□□□ 1.53
GRN-205ENST00000586443 IGSF1Q8N6C5 1336 aa24.62■■□□□ 1.53
GRN-205ENST00000586443 SULT6B1Q6IMI4 303 aa24.61■■□□□ 1.53
GRN-205ENST00000586443 LMOD2Q6P5Q4 547 aa24.6■■□□□ 1.53
GRN-205ENST00000586443 MED1Q15648 1581 aaPredicted RBP24.59■■□□□ 1.53
GRN-205ENST00000586443 MYH16Q9H6N6 1097 aa24.59■■□□□ 1.53
GRN-205ENST00000586443 RRP1P56182 461 aaKnown RBP24.59■■□□□ 1.53
GRN-205ENST00000586443 ARHGEF25Q86VW2 580 aa24.58■■□□□ 1.52
GRN-205ENST00000586443 AEBP1Q8IUX7 1158 aa24.58■■□□□ 1.52
GRN-205ENST00000586443 SPATA31A3Q5VYP0 1347 aa24.58■■□□□ 1.52
GRN-205ENST00000586443 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
GRN-205ENST00000586443 EYA1Q99502 592 aa24.57■■□□□ 1.52
GRN-205ENST00000586443 IRX6P78412 446 aaPredicted RBP24.56■■□□□ 1.52
GRN-205ENST00000586443 LMOD3Q0VAK6 560 aa24.56■■□□□ 1.52
GRN-205ENST00000586443 LTBP4Q8N2S1 1624 aa24.56■■□□□ 1.52
GRN-205ENST00000586443 CRYBG1Q9Y4K1 1723 aa24.55■■□□□ 1.52
GRN-205ENST00000586443 DLG5Q8TDM6 1919 aa24.55■■□□□ 1.52
GRN-205ENST00000586443 SOS2Q07890 1332 aaPredicted RBP24.55■■□□□ 1.52
GRN-205ENST00000586443 CALD1Q05682 793 aaKnown RBP24.54■■□□□ 1.52
GRN-205ENST00000586443 NHSL1Q5SYE7 1610 aa24.54■■□□□ 1.52
GRN-205ENST00000586443 ABCC6O95255 1503 aa24.51■■□□□ 1.51
GRN-205ENST00000586443 CT47B1P0C2W7 299 aaPredicted RBP24.49■■□□□ 1.51
GRN-205ENST00000586443 FANCIQ9NVI1 1328 aa24.48■■□□□ 1.51
GRN-205ENST00000586443 LTV1Q96GA3 475 aaPredicted RBP24.47■■□□□ 1.51
GRN-205ENST00000586443 NCAPD2Q15021 1401 aa24.47■■□□□ 1.51
GRN-205ENST00000586443 CAMTA1Q9Y6Y1 1673 aa24.46■■□□□ 1.51
GRN-205ENST00000586443 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.46■■□□□ 1.51
GRN-205ENST00000586443 PPP4R2Q9NY27 417 aa24.46■■□□□ 1.51
GRN-205ENST00000586443 CPDO75976 1380 aa24.45■■□□□ 1.5
GRN-205ENST00000586443 ZBTB7CA1YPR0 619 aa24.45■■□□□ 1.5
GRN-205ENST00000586443 GAS2L2Q8NHY3 880 aa24.45■■□□□ 1.5
GRN-205ENST00000586443 COL18A1P39060 1754 aa24.44■■□□□ 1.5
GRN-205ENST00000586443 IFT57Q9NWB7 429 aa24.44■■□□□ 1.5
GRN-205ENST00000586443 GNAI1P63096 354 aa24.43■■□□□ 1.5
GRN-205ENST00000586443 NBPF6Q5VWK0 638 aa24.42■■□□□ 1.5
GRN-205ENST00000586443 TSR2Q969E8 191 aaKnown RBP24.42■■□□□ 1.5
GRN-205ENST00000586443 NBPF4Q96M43 638 aa24.42■■□□□ 1.5
GRN-205ENST00000586443 PLEKHG5O94827 1062 aa24.42■■□□□ 1.5
GRN-205ENST00000586443 ZC3H6P61129 1189 aaKnown RBP24.42■■□□□ 1.5
GRN-205ENST00000586443 MTHFSDQ2M296 383 aaKnown RBP24.42■■□□□ 1.5
GRN-205ENST00000586443 ANKRD24Q8TF21 1146 aa24.42■■□□□ 1.5
GRN-205ENST00000586443 RGPD2P0DJD1 1756 aa24.41■■□□□ 1.5
GRN-205ENST00000586443 ZNF853P0CG23 659 aa24.41■■□□□ 1.5
GRN-205ENST00000586443 LMO7Q8WWI1 1683 aa24.4■■□□□ 1.5
GRN-205ENST00000586443 RGPD5Q99666 1765 aa24.4■■□□□ 1.5
GRN-205ENST00000586443 HTATSF1O43719 755 aaKnown RBP24.4■■□□□ 1.5
GRN-205ENST00000586443 AXIN2Q9Y2T1 843 aa24.4■■□□□ 1.5
GRN-205ENST00000586443 CABLES1Q8TDN4 633 aa24.39■■□□□ 1.5
GRN-205ENST00000586443 CFAP44Q96MT7 982 aa24.39■■□□□ 1.5
GRN-205ENST00000586443 THUMPD2Q9BTF0 503 aaKnown RBP24.39■■□□□ 1.5
GRN-205ENST00000586443 ERBB3P21860 1342 aa24.39■■□□□ 1.49
GRN-205ENST00000586443 FAM208AQ9UK61 1670 aaKnown RBP24.39■■□□□ 1.49
GRN-205ENST00000586443 ROBO1Q9Y6N7 1651 aa24.39■■□□□ 1.49
GRN-205ENST00000586443 ABCA3Q99758 1704 aa24.39■■□□□ 1.49
GRN-205ENST00000586443 AHDC1Q5TGY3 1603 aaPredicted RBP24.38■■□□□ 1.49
GRN-205ENST00000586443 RARSP54136 660 aaKnown RBP24.38■■□□□ 1.49
GRN-205ENST00000586443 FAM83GA6ND36 823 aa24.37■■□□□ 1.49
GRN-205ENST00000586443 EXOSC9Q06265 439 aaKnown RBP24.37■■□□□ 1.49
GRN-205ENST00000586443 PLIN1O60240 522 aa24.37■■□□□ 1.49
GRN-205ENST00000586443 BCAR3O75815 825 aa24.36■■□□□ 1.49
GRN-205ENST00000586443 USHBP1Q8N6Y0 703 aa24.36■■□□□ 1.49
GRN-205ENST00000586443 LRRC59Q96AG4 307 aaKnown RBP24.36■■□□□ 1.49
GRN-205ENST00000586443 KIAA0232Q92628 1395 aa24.35■■□□□ 1.49
GRN-205ENST00000586443 RTF1Q92541 710 aaKnown RBP24.35■■□□□ 1.49
GRN-205ENST00000586443 LRRC37A3O60309 1634 aa24.35■■□□□ 1.49
GRN-205ENST00000586443 DCTN1Q14203 1278 aa24.34■■□□□ 1.49
GRN-205ENST00000586443 ZNF428Q96B54 188 aa24.34■■□□□ 1.49
GRN-205ENST00000586443 CRB1P82279 1406 aa24.34■■□□□ 1.49
GRN-205ENST00000586443 MBIPQ9NS73 344 aa24.33■■□□□ 1.49
GRN-205ENST00000586443 MAP3K5Q99683 1374 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms