RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 SMG6Q86US8 1419 aaKnown RBP12.7□□□□□ -0.38
ZNF540-203ENST00000586134 ATP7BP35670 1465 aa12.7□□□□□ -0.38
ZNF540-203ENST00000586134 TULP1O00294 542 aaPredicted RBP12.69□□□□□ -0.38
ZNF540-203ENST00000586134 RBM6P78332 1123 aaKnown RBP12.69□□□□□ -0.38
ZNF540-203ENST00000586134 C8orf37Q96NL8 207 aa12.69□□□□□ -0.38
ZNF540-203ENST00000586134 ATRNO75882 1429 aa12.69□□□□□ -0.38
ZNF540-203ENST00000586134 NUTM2FA1L443 756 aa12.69□□□□□ -0.38
ZNF540-203ENST00000586134 NGLY1Q96IV0 654 aa12.69□□□□□ -0.38
ZNF540-203ENST00000586134 ZHX1Q9UKY1 873 aaPredicted RBP12.69□□□□□ -0.38
ZNF540-203ENST00000586134 CRYBG1Q9Y4K1 1723 aa12.69□□□□□ -0.38
ZNF540-203ENST00000586134 LETM1O95202 739 aaPredicted RBP12.68□□□□□ -0.38
ZNF540-203ENST00000586134 QRICH2Q9H0J4 1663 aa12.68□□□□□ -0.38
ZNF540-203ENST00000586134 SLIT2O94813 1529 aa12.68□□□□□ -0.38
ZNF540-203ENST00000586134 MINK1Q8N4C8 1332 aaPredicted RBP12.67□□□□□ -0.38
ZNF540-203ENST00000586134 SAFB2Q14151 953 aaKnown RBP eCLIP12.67□□□□□ -0.38
ZNF540-203ENST00000586134 QTRT2Q9H974 415 aaKnown RBP12.67□□□□□ -0.38
ZNF540-203ENST00000586134 RNF216Q9NWF9 866 aaPredicted RBP12.67□□□□□ -0.38
ZNF540-203ENST00000586134 TRPC5Q9UL62 973 aaPredicted RBP12.67□□□□□ -0.38
ZNF540-203ENST00000586134 GPRASP1Q5JY77 1395 aa12.67□□□□□ -0.38
ZNF540-203ENST00000586134 PRR36Q9H6K5 1346 aa12.67□□□□□ -0.38
ZNF540-203ENST00000586134 FSD2A1L4K1 749 aa12.67□□□□□ -0.38
ZNF540-203ENST00000586134 GOLGA6L3A6NEY3 463 aa12.66□□□□□ -0.38
ZNF540-203ENST00000586134 ADAMTS2O95450 1211 aa12.66□□□□□ -0.38
ZNF540-203ENST00000586134 ISY1Q9ULR0 285 aaKnown RBP12.66□□□□□ -0.38
ZNF540-203ENST00000586134 BCL9LQ86UU0 1499 aa12.66□□□□□ -0.38
ZNF540-203ENST00000586134 PLCH1Q4KWH8 1693 aa12.66□□□□□ -0.38
ZNF540-203ENST00000586134 L3MBTL2Q969R5 705 aa12.66□□□□□ -0.38
ZNF540-203ENST00000586134 USP21Q9UK80 565 aa12.66□□□□□ -0.38
ZNF540-203ENST00000586134 POLR3AO14802 1390 aaPredicted RBP12.65□□□□□ -0.38
ZNF540-203ENST00000586134 BRD4O60885 1362 aaPredicted RBP12.65□□□□□ -0.38
ZNF540-203ENST00000586134 XRCC6P12956 609 aaKnown RBP eCLIP12.65□□□□□ -0.38
ZNF540-203ENST00000586134 XPCQ01831 940 aaPredicted RBP12.65□□□□□ -0.38
ZNF540-203ENST00000586134 TRIM44Q96DX7 344 aaPredicted RBP12.65□□□□□ -0.38
ZNF540-203ENST00000586134 RGS12O14924 1447 aa12.65□□□□□ -0.38
ZNF540-203ENST00000586134 KIAA1211Q6ZU35 1233 aa12.64□□□□□ -0.39
ZNF540-203ENST00000586134 IRX3P78415 501 aaPredicted RBP12.64□□□□□ -0.39
ZNF540-203ENST00000586134 NBPF1Q3BBV0 1214 aa12.64□□□□□ -0.39
ZNF540-203ENST00000586134 RGS22Q8NE09 1264 aa12.64□□□□□ -0.39
ZNF540-203ENST00000586134 HIRIP3Q9BW71 556 aaPredicted RBP12.64□□□□□ -0.39
ZNF540-203ENST00000586134 COL14A1Q05707 1796 aaKnown RBP12.64□□□□□ -0.39
ZNF540-203ENST00000586134 PLEKHG3A1L390 1219 aa12.63□□□□□ -0.39
ZNF540-203ENST00000586134 NUDT16Q96DE0 195 aaKnown RBP12.63□□□□□ -0.39
ZNF540-203ENST00000586134 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.62□□□□□ -0.39
ZNF540-203ENST00000586134 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
ZNF540-203ENST00000586134 NRAPQ86VF7 1730 aa12.62□□□□□ -0.39
ZNF540-203ENST00000586134 CDK11BP21127 795 aaKnown RBP12.62□□□□□ -0.39
ZNF540-203ENST00000586134 MRE11P49959 708 aa12.62□□□□□ -0.39
ZNF540-203ENST00000586134 SLC20A2Q08357 652 aa12.62□□□□□ -0.39
ZNF540-203ENST00000586134 PMFBP1Q8TBY8 1022 aa12.62□□□□□ -0.39
ZNF540-203ENST00000586134 CDK19Q9BWU1 502 aa12.62□□□□□ -0.39
ZNF540-203ENST00000586134 PHRF1Q9P1Y6 1649 aaKnown RBP12.61□□□□□ -0.39
ZNF540-203ENST00000586134 ZSCAN20P17040 1043 aaPredicted RBP12.61□□□□□ -0.39
ZNF540-203ENST00000586134 PLCD3Q8N3E9 789 aa12.61□□□□□ -0.39
ZNF540-203ENST00000586134 OFD1O75665 1012 aa12.61□□□□□ -0.39
ZNF540-203ENST00000586134 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
ZNF540-203ENST00000586134 RIPK4P57078 832 aa12.61□□□□□ -0.39
ZNF540-203ENST00000586134 UNC5CLQ8IV45 518 aa12.61□□□□□ -0.39
ZNF540-203ENST00000586134 SIN3AQ96ST3 1273 aa12.61□□□□□ -0.39
ZNF540-203ENST00000586134 SBNO2Q9Y2G9 1366 aa12.61□□□□□ -0.39
ZNF540-203ENST00000586134 GLI3P10071 1580 aa12.6□□□□□ -0.39
ZNF540-203ENST00000586134 CLGNO14967 610 aa12.6□□□□□ -0.39
ZNF540-203ENST00000586134 MMP14P50281 582 aa12.6□□□□□ -0.39
ZNF540-203ENST00000586134 NGDNQ8NEJ9 315 aaKnown RBP12.6□□□□□ -0.39
ZNF540-203ENST00000586134 UPF1Q92900 1129 aaKnown RBP eCLIP12.59□□□□□ -0.39
ZNF540-203ENST00000586134 GJD4Q96KN9 370 aaPredicted RBP12.59□□□□□ -0.39
ZNF540-203ENST00000586134 MYH16Q9H6N6 1097 aa12.59□□□□□ -0.39
ZNF540-203ENST00000586134 RALGAPBQ86X10 1494 aa12.58□□□□□ -0.4
ZNF540-203ENST00000586134 ROCK2O75116 1388 aaKnown RBP12.58□□□□□ -0.4
ZNF540-203ENST00000586134 ATAD2Q6PL18 1390 aa12.58□□□□□ -0.4
ZNF540-203ENST00000586134 CCDC94Q9BW85 323 aaPredicted RBP12.58□□□□□ -0.4
ZNF540-203ENST00000586134 VPS72Q15906 364 aa12.57□□□□□ -0.4
ZNF540-203ENST00000586134 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
ZNF540-203ENST00000586134 NUDCQ9Y266 331 aa12.57□□□□□ -0.4
ZNF540-203ENST00000586134 AKAP12Q02952 1782 aa12.57□□□□□ -0.4
ZNF540-203ENST00000586134 ACEP12821 1306 aa12.57□□□□□ -0.4
ZNF540-203ENST00000586134 PPIP5K1Q6PFW1 1433 aa12.56□□□□□ -0.4
ZNF540-203ENST00000586134 DYNC1I1O14576 645 aa12.56□□□□□ -0.4
ZNF540-203ENST00000586134 NBPF8Q3BBV2 869 aa12.56□□□□□ -0.4
ZNF540-203ENST00000586134 DNTTIP2Q5QJE6 756 aaKnown RBP12.56□□□□□ -0.4
ZNF540-203ENST00000586134 EVC2Q86UK5 1308 aa12.56□□□□□ -0.4
ZNF540-203ENST00000586134 ONECUT3O60422 494 aaPredicted RBP12.55□□□□□ -0.4
ZNF540-203ENST00000586134 AXDND1Q5T1B0 1012 aaPredicted RBP12.55□□□□□ -0.4
ZNF540-203ENST00000586134 BRWD3Q6RI45 1802 aa12.55□□□□□ -0.4
ZNF540-203ENST00000586134 NRKQ7Z2Y5 1582 aa12.55□□□□□ -0.4
ZNF540-203ENST00000586134 VGLL3A8MV65 326 aa12.55□□□□□ -0.4
ZNF540-203ENST00000586134 PTMSP20962 102 aa12.55□□□□□ -0.4
ZNF540-203ENST00000586134 TONSLQ96HA7 1378 aa12.55□□□□□ -0.4
ZNF540-203ENST00000586134 LMOD2Q6P5Q4 547 aa12.54□□□□□ -0.4
ZNF540-203ENST00000586134 CABLES1Q8TDN4 633 aa12.54□□□□□ -0.4
ZNF540-203ENST00000586134 FAM13BQ9NYF5 915 aa12.54□□□□□ -0.4
ZNF540-203ENST00000586134 FAM83GA6ND36 823 aa12.54□□□□□ -0.4
ZNF540-203ENST00000586134 SRPK2P78362 688 aaKnown RBP12.54□□□□□ -0.4
ZNF540-203ENST00000586134 CCDC125Q86Z20 511 aa12.54□□□□□ -0.4
ZNF540-203ENST00000586134 USP19O94966 1318 aa12.54□□□□□ -0.4
ZNF540-203ENST00000586134 CPDO75976 1380 aa12.54□□□□□ -0.4
ZNF540-203ENST00000586134 USP6P35125 1406 aa12.53□□□□□ -0.4
ZNF540-203ENST00000586134 SSH2Q76I76 1423 aa12.53□□□□□ -0.4
ZNF540-203ENST00000586134 ERBB4Q15303 1308 aa12.52□□□□□ -0.4
ZNF540-203ENST00000586134 USP54Q70EL1 1684 aa12.52□□□□□ -0.4
ZNF540-203ENST00000586134 MON2Q7Z3U7 1717 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms