RNA–Protein interactions for RNA: ENST00000584985.5

THRA-209, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene THRA, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-209ENST00000584985 ELL2O00472 640 aaPredicted RBP28.41■■■□□ 2.14
THRA-209ENST00000584985 YEATS2Q9ULM3 1422 aa28.4■■■□□ 2.14
THRA-209ENST00000584985 TNPO1Q92973 898 aaKnown RBP28.4■■■□□ 2.14
THRA-209ENST00000584985 HSP90AB1P08238 724 aaKnown RBP28.4■■■□□ 2.14
THRA-209ENST00000584985 GCC1Q96CN9 775 aa28.4■■■□□ 2.14
THRA-209ENST00000584985 PREX1Q8TCU6 1659 aa28.4■■■□□ 2.14
THRA-209ENST00000584985 NFE2L2Q16236 605 aa28.39■■■□□ 2.14
THRA-209ENST00000584985 TMEM131LA2VDJ0 1609 aa28.39■■■□□ 2.13
THRA-209ENST00000584985 ARHGEF40Q8TER5 1519 aa28.38■■■□□ 2.13
THRA-209ENST00000584985 MRE11P49959 708 aa28.38■■■□□ 2.13
THRA-209ENST00000584985 SIRT2Q8IXJ6 389 aa28.38■■■□□ 2.13
THRA-209ENST00000584985 CDC42BPGQ6DT37 1551 aa28.37■■■□□ 2.13
THRA-209ENST00000584985 CD2BP2O95400 341 aaKnown RBP28.37■■■□□ 2.13
THRA-209ENST00000584985 ARHGAP45Q92619 1136 aa28.37■■■□□ 2.13
THRA-209ENST00000584985 KIF20BQ96Q89 1820 aa28.36■■■□□ 2.13
THRA-209ENST00000584985 FBXO31Q5XUX0 539 aaPredicted RBP28.36■■■□□ 2.13
THRA-209ENST00000584985 TBC1D9Q6ZT07 1266 aa28.35■■■□□ 2.13
THRA-209ENST00000584985 FOXD4L1Q9NU39 408 aa28.35■■■□□ 2.13
THRA-209ENST00000584985 PIK3R4Q99570 1358 aa28.34■■■□□ 2.13
THRA-209ENST00000584985 GRPEL1Q9HAV7 217 aa28.34■■■□□ 2.13
THRA-209ENST00000584985 MBIPQ9NS73 344 aa28.34■■■□□ 2.13
THRA-209ENST00000584985 PTCH1Q13635 1447 aa28.33■■■□□ 2.13
THRA-209ENST00000584985 CHMP4BQ9H444 224 aaKnown RBP28.33■■■□□ 2.13
THRA-209ENST00000584985 CIZ1Q9ULV3 898 aaPredicted RBP28.33■■■□□ 2.13
THRA-209ENST00000584985 WAPLQ7Z5K2 1190 aa28.33■■■□□ 2.13
THRA-209ENST00000584985 RBM42Q9BTD8 480 aaKnown RBP28.33■■■□□ 2.13
THRA-209ENST00000584985 EMILIN1Q9Y6C2 1016 aa28.33■■■□□ 2.13
THRA-209ENST00000584985 ALKQ9UM73 1620 aa28.32■■■□□ 2.12
THRA-209ENST00000584985 GNAI1P63096 354 aa28.32■■■□□ 2.12
THRA-209ENST00000584985 RAB3GAP1Q15042 981 aa28.32■■■□□ 2.12
THRA-209ENST00000584985 IFT57Q9NWB7 429 aa28.31■■■□□ 2.12
THRA-209ENST00000584985 CALD1Q05682 793 aaKnown RBP28.31■■■□□ 2.12
THRA-209ENST00000584985 HSP90AA1P07900 732 aaKnown RBP28.3■■■□□ 2.12
THRA-209ENST00000584985 ABCC4O15439 1325 aa28.3■■■□□ 2.12
THRA-209ENST00000584985 ZNF853P0CG23 659 aa28.3■■■□□ 2.12
THRA-209ENST00000584985 GBP4Q96PP9 640 aa28.29■■■□□ 2.12
THRA-209ENST00000584985 TWISTNBQ3B726 338 aaPredicted RBP28.29■■■□□ 2.12
THRA-209ENST00000584985 IL13P35225 146 aa28.28■■■□□ 2.12
THRA-209ENST00000584985 C8orf58Q8NAV2 365 aa28.28■■■□□ 2.12
THRA-209ENST00000584985 MAP2P11137 1827 aaKnown RBP28.28■■■□□ 2.12
THRA-209ENST00000584985 K7ELQ4 463 aaPredicted RBP28.28■■■□□ 2.12
THRA-209ENST00000584985 STAG3Q9UJ98 1225 aa28.27■■■□□ 2.12
THRA-209ENST00000584985 GAS2L3Q86XJ1 694 aa28.26■■■□□ 2.11
THRA-209ENST00000584985 ZRANB1Q9UGI0 708 aa28.26■■■□□ 2.11
THRA-209ENST00000584985 CLCN1P35523 988 aa28.24■■■□□ 2.11
THRA-209ENST00000584985 NME9Q86XW9 330 aa28.24■■■□□ 2.11
THRA-209ENST00000584985 FAM83GA6ND36 823 aa28.24■■■□□ 2.11
THRA-209ENST00000584985 CFAP44Q96MT7 982 aa28.23■■■□□ 2.11
THRA-209ENST00000584985 ISY1Q9ULR0 285 aaKnown RBP28.23■■■□□ 2.11
THRA-209ENST00000584985 GAS2L2Q8NHY3 880 aa28.23■■■□□ 2.11
THRA-209ENST00000584985 CDC45O75419 566 aa28.22■■■□□ 2.11
THRA-209ENST00000584985 GSPT1P15170 499 aaKnown RBP28.22■■■□□ 2.11
THRA-209ENST00000584985 ATP7BP35670 1465 aa28.22■■■□□ 2.11
THRA-209ENST00000584985 DCTN1Q14203 1278 aa28.21■■■□□ 2.11
THRA-209ENST00000584985 API5Q9BZZ5 524 aaKnown RBP28.21■■■□□ 2.11
THRA-209ENST00000584985 SSFA2P28290 1259 aa28.2■■■□□ 2.11
THRA-209ENST00000584985 SKOR2Q2VWA4 1001 aaPredicted RBP28.2■■■□□ 2.11
THRA-209ENST00000584985 PLEKHM2Q8IWE5 1019 aa28.2■■■□□ 2.11
THRA-209ENST00000584985 RRS1Q15050 365 aaKnown RBP28.18■■■□□ 2.1
THRA-209ENST00000584985 C16orf71Q8IYS4 520 aaPredicted RBP28.17■■■□□ 2.1
THRA-209ENST00000584985 LMOD3Q0VAK6 560 aa28.16■■■□□ 2.1
THRA-209ENST00000584985 DCTPP1Q9H773 170 aa28.16■■■□□ 2.1
THRA-209ENST00000584985 NAP1L5Q96NT1 182 aaPredicted RBP28.16■■■□□ 2.1
THRA-209ENST00000584985 CPSF1Q10570 1443 aaKnown RBP28.15■■■□□ 2.1
THRA-209ENST00000584985 CDK12Q9NYV4 1490 aaPredicted RBP28.14■■■□□ 2.1
THRA-209ENST00000584985 DLG5Q8TDM6 1919 aa28.14■■■□□ 2.1
THRA-209ENST00000584985 EDC4Q6P2E9 1401 aaKnown RBP28.14■■■□□ 2.1
THRA-209ENST00000584985 RIMS2Q9UQ26 1411 aa28.14■■■□□ 2.1
THRA-209ENST00000584985 ERBB4Q15303 1308 aa28.14■■■□□ 2.1
THRA-209ENST00000584985 PTMSP20962 102 aa28.14■■■□□ 2.1
THRA-209ENST00000584985 KNDC1Q76NI1 1749 aa28.14■■■□□ 2.09
THRA-209ENST00000584985 NCKAP5LQ9HCH0 1330 aa28.13■■■□□ 2.09
THRA-209ENST00000584985 ESPNB1AK53 854 aa28.13■■■□□ 2.09
THRA-209ENST00000584985 DLC1Q96QB1 1528 aa28.13■■■□□ 2.09
THRA-209ENST00000584985 TTC22Q5TAA0 569 aa28.12■■■□□ 2.09
THRA-209ENST00000584985 WASLO00401 505 aaPredicted RBP28.12■■■□□ 2.09
THRA-209ENST00000584985 COG3Q96JB2 828 aa28.11■■■□□ 2.09
THRA-209ENST00000584985 AATKQ6ZMQ8 1374 aa28.11■■■□□ 2.09
THRA-209ENST00000584985 KRT24Q2M2I5 525 aa28.1■■■□□ 2.09
THRA-209ENST00000584985 OTUD7AQ8TE49 926 aaPredicted RBP28.1■■■□□ 2.09
THRA-209ENST00000584985 REREQ9P2R6 1566 aa28.1■■■□□ 2.09
THRA-209ENST00000584985 BAG4O95429 457 aaKnown RBP28.09■■■□□ 2.09
THRA-209ENST00000584985 INTS3Q68E01 1043 aaKnown RBP28.09■■■□□ 2.09
THRA-209ENST00000584985 CLEC17AQ6ZS10 378 aa28.09■■■□□ 2.09
THRA-209ENST00000584985 KIF24Q5T7B8 1368 aa28.09■■■□□ 2.09
THRA-209ENST00000584985 USP26Q9BXU7 913 aa28.09■■■□□ 2.09
THRA-209ENST00000584985 RABEP1Q15276 862 aa28.08■■■□□ 2.09
THRA-209ENST00000584985 UBE2Q2Q8WVN8 375 aa28.08■■■□□ 2.09
THRA-209ENST00000584985 TRIM44Q96DX7 344 aaPredicted RBP28.08■■■□□ 2.09
THRA-209ENST00000584985 GOLGA6L22H0YM25 854 aa28.08■■■□□ 2.09
THRA-209ENST00000584985 MLECQ14165 292 aa28.07■■■□□ 2.08
THRA-209ENST00000584985 ANKRD44Q8N8A2 993 aa28.07■■■□□ 2.08
THRA-209ENST00000584985 NUDT16Q96DE0 195 aaKnown RBP28.07■■■□□ 2.08
THRA-209ENST00000584985 DDX49Q9Y6V7 483 aaKnown RBP28.06■■■□□ 2.08
THRA-209ENST00000584985 CPS1P31327 1500 aa28.06■■■□□ 2.08
THRA-209ENST00000584985 AEBP1Q8IUX7 1158 aa28.06■■■□□ 2.08
THRA-209ENST00000584985 AK9Q5TCS8 1911 aa28.05■■■□□ 2.08
THRA-209ENST00000584985 A2ML1A8K2U0 1454 aa28.05■■■□□ 2.08
THRA-209ENST00000584985 APBB1O00213 710 aa28.05■■■□□ 2.08
THRA-209ENST00000584985 TXNDC2Q86VQ3 553 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms