RNA–Protein interactions for RNA: ENST00000584336.1

CDK12-208, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 1,963 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-208ENST00000584336 FCHSD2O94868 740 aa13.67□□□□□ -0.22
CDK12-208ENST00000584336 RIPK4P57078 832 aa13.67□□□□□ -0.22
CDK12-208ENST00000584336 MAPK8IP3Q9UPT6 1336 aa13.67□□□□□ -0.22
CDK12-208ENST00000584336 ATF3P18847 181 aa13.66□□□□□ -0.22
CDK12-208ENST00000584336 LMOD2Q6P5Q4 547 aa13.66□□□□□ -0.22
CDK12-208ENST00000584336 KRT28Q7Z3Y7 464 aa13.66□□□□□ -0.22
CDK12-208ENST00000584336 MSH6P52701 1360 aa13.65□□□□□ -0.22
CDK12-208ENST00000584336 ZBTB7CA1YPR0 619 aa13.65□□□□□ -0.22
CDK12-208ENST00000584336 E9PSI1 815 aa13.65□□□□□ -0.22
CDK12-208ENST00000584336 AMPHP49418 695 aa13.65□□□□□ -0.22
CDK12-208ENST00000584336 SULT6B1Q6IMI4 303 aa13.65□□□□□ -0.22
CDK12-208ENST00000584336 THUMPD2Q9BTF0 503 aaKnown RBP13.65□□□□□ -0.22
CDK12-208ENST00000584336 C20orf194Q5TEA3 1177 aa13.65□□□□□ -0.22
CDK12-208ENST00000584336 LTV1Q96GA3 475 aaPredicted RBP13.65□□□□□ -0.22
CDK12-208ENST00000584336 PIP4K2BP78356 416 aa13.64□□□□□ -0.23
CDK12-208ENST00000584336 CCDC27Q2M243 656 aa13.64□□□□□ -0.23
CDK12-208ENST00000584336 B4GALNT3Q6L9W6 998 aa13.64□□□□□ -0.23
CDK12-208ENST00000584336 TSR2Q969E8 191 aaKnown RBP13.64□□□□□ -0.23
CDK12-208ENST00000584336 BCAR3O75815 825 aa13.63□□□□□ -0.23
CDK12-208ENST00000584336 HOXC9P31274 260 aa13.63□□□□□ -0.23
CDK12-208ENST00000584336 EXOC6Q8TAG9 804 aa13.63□□□□□ -0.23
CDK12-208ENST00000584336 SBNO1A3KN83 1393 aa13.63□□□□□ -0.23
CDK12-208ENST00000584336 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
CDK12-208ENST00000584336 TRPM3Q9HCF6 1732 aaPredicted RBP13.62□□□□□ -0.23
CDK12-208ENST00000584336 FAM83GA6ND36 823 aa13.62□□□□□ -0.23
CDK12-208ENST00000584336 EYA1Q99502 592 aa13.62□□□□□ -0.23
CDK12-208ENST00000584336 USP54Q70EL1 1684 aa13.62□□□□□ -0.23
CDK12-208ENST00000584336 DCTN1Q14203 1278 aa13.62□□□□□ -0.23
CDK12-208ENST00000584336 NFE2L2Q16236 605 aa13.62□□□□□ -0.23
CDK12-208ENST00000584336 NGEFQ8N5V2 710 aa13.62□□□□□ -0.23
CDK12-208ENST00000584336 FLT4P35916 1363 aa13.61□□□□□ -0.23
CDK12-208ENST00000584336 USHBP1Q8N6Y0 703 aa13.61□□□□□ -0.23
CDK12-208ENST00000584336 RGPD1P0DJD0 1748 aa13.6□□□□□ -0.23
CDK12-208ENST00000584336 PPP4R2Q9NY27 417 aa13.6□□□□□ -0.23
CDK12-208ENST00000584336 SLAIN2Q9P270 581 aa13.6□□□□□ -0.23
CDK12-208ENST00000584336 NFAT5O94916 1531 aa13.6□□□□□ -0.23
CDK12-208ENST00000584336 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
CDK12-208ENST00000584336 CABLES1Q8TDN4 633 aa13.59□□□□□ -0.23
CDK12-208ENST00000584336 PNNQ9H307 717 aaKnown RBP13.59□□□□□ -0.23
CDK12-208ENST00000584336 LAS1LQ9Y4W2 734 aaKnown RBP13.59□□□□□ -0.23
CDK12-208ENST00000584336 FANCIQ9NVI1 1328 aa13.59□□□□□ -0.23
CDK12-208ENST00000584336 DCCP43146 1447 aa13.59□□□□□ -0.23
CDK12-208ENST00000584336 GCP02774 474 aa13.58□□□□□ -0.24
CDK12-208ENST00000584336 CRBNQ96SW2 442 aa13.58□□□□□ -0.24
CDK12-208ENST00000584336 LTN1O94822 1766 aa13.58□□□□□ -0.24
CDK12-208ENST00000584336 HSPA1LP34931 641 aa13.58□□□□□ -0.24
CDK12-208ENST00000584336 EXOSC9Q06265 439 aaKnown RBP13.58□□□□□ -0.24
CDK12-208ENST00000584336 BRINP3Q76B58 766 aa13.58□□□□□ -0.24
CDK12-208ENST00000584336 BCL2L13Q9BXK5 485 aa13.58□□□□□ -0.24
CDK12-208ENST00000584336 TNNQ9UQP3 1299 aa13.58□□□□□ -0.24
CDK12-208ENST00000584336 KIF1AQ12756 1690 aa13.57□□□□□ -0.24
CDK12-208ENST00000584336 NCBP3Q53F19 620 aaKnown RBP13.57□□□□□ -0.24
CDK12-208ENST00000584336 DLG5Q8TDM6 1919 aa13.57□□□□□ -0.24
CDK12-208ENST00000584336 ZC3H6P61129 1189 aaKnown RBP13.56□□□□□ -0.24
CDK12-208ENST00000584336 IP6K1Q92551 441 aa13.56□□□□□ -0.24
CDK12-208ENST00000584336 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
CDK12-208ENST00000584336 AXIN2Q9Y2T1 843 aa13.56□□□□□ -0.24
CDK12-208ENST00000584336 MED1Q15648 1581 aaPredicted RBP13.56□□□□□ -0.24
CDK12-208ENST00000584336 IGSF1Q8N6C5 1336 aa13.56□□□□□ -0.24
CDK12-208ENST00000584336 MTHFSDQ2M296 383 aaKnown RBP13.56□□□□□ -0.24
CDK12-208ENST00000584336 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
CDK12-208ENST00000584336 SLIT3O75094 1523 aa13.55□□□□□ -0.24
CDK12-208ENST00000584336 NEFMP07197 916 aa13.55□□□□□ -0.24
CDK12-208ENST00000584336 NBPF6Q5VWK0 638 aa13.55□□□□□ -0.24
CDK12-208ENST00000584336 MCM10Q7L590 875 aa13.55□□□□□ -0.24
CDK12-208ENST00000584336 ARHGEF25Q86VW2 580 aa13.55□□□□□ -0.24
CDK12-208ENST00000584336 NBPF4Q96M43 638 aa13.55□□□□□ -0.24
CDK12-208ENST00000584336 USP19O94966 1318 aa13.55□□□□□ -0.24
CDK12-208ENST00000584336 ALS2Q96Q42 1657 aa13.55□□□□□ -0.24
CDK12-208ENST00000584336 ARHGEF10O15013 1369 aa13.55□□□□□ -0.24
CDK12-208ENST00000584336 RARSP54136 660 aaKnown RBP13.54□□□□□ -0.24
CDK12-208ENST00000584336 ROBO1Q9Y6N7 1651 aa13.54□□□□□ -0.24
CDK12-208ENST00000584336 PXDNQ92626 1479 aa13.54□□□□□ -0.24
CDK12-208ENST00000584336 MYH16Q9H6N6 1097 aa13.54□□□□□ -0.24
CDK12-208ENST00000584336 RGPD2P0DJD1 1756 aa13.53□□□□□ -0.24
CDK12-208ENST00000584336 KCNH5Q8NCM2 988 aa13.53□□□□□ -0.24
CDK12-208ENST00000584336 TSPYL6Q8N831 410 aa13.52□□□□□ -0.25
CDK12-208ENST00000584336 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
CDK12-208ENST00000584336 FRAT1Q92837 279 aaPredicted RBP13.51□□□□□ -0.25
CDK12-208ENST00000584336 MBIPQ9NS73 344 aa13.51□□□□□ -0.25
CDK12-208ENST00000584336 IL16Q14005 1332 aa13.51□□□□□ -0.25
CDK12-208ENST00000584336 SPATA31A3Q5VYP0 1347 aa13.51□□□□□ -0.25
CDK12-208ENST00000584336 KDRP35968 1356 aa13.51□□□□□ -0.25
CDK12-208ENST00000584336 ELL2O00472 640 aaPredicted RBP13.51□□□□□ -0.25
CDK12-208ENST00000584336 ZNF853P0CG23 659 aa13.51□□□□□ -0.25
CDK12-208ENST00000584336 CHRNA2Q15822 529 aa13.51□□□□□ -0.25
CDK12-208ENST00000584336 RTL1A6NKG5 1358 aa13.5□□□□□ -0.25
CDK12-208ENST00000584336 KRT24Q2M2I5 525 aa13.5□□□□□ -0.25
CDK12-208ENST00000584336 KIF24Q5T7B8 1368 aa13.5□□□□□ -0.25
CDK12-208ENST00000584336 PANK1Q8TE04 598 aa13.5□□□□□ -0.25
CDK12-208ENST00000584336 ANKRD24Q8TF21 1146 aa13.5□□□□□ -0.25
CDK12-208ENST00000584336 RGPD5Q99666 1765 aa13.5□□□□□ -0.25
CDK12-208ENST00000584336 MIS18AQ9NYP9 233 aa13.5□□□□□ -0.25
CDK12-208ENST00000584336 TNS3Q68CZ2 1445 aa13.49□□□□□ -0.25
CDK12-208ENST00000584336 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
CDK12-208ENST00000584336 CCDC136Q96JN2 1154 aa13.49□□□□□ -0.25
CDK12-208ENST00000584336 RLBP1P12271 317 aa13.48□□□□□ -0.25
CDK12-208ENST00000584336 C8orf58Q8NAV2 365 aa13.48□□□□□ -0.25
CDK12-208ENST00000584336 SSH1Q8WYL5 1049 aa13.48□□□□□ -0.25
CDK12-208ENST00000584336 PHRF1Q9P1Y6 1649 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms