RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 WWC1Q8IX03 1113 aa7.21□□□□□ -1.26
CRLF3-204ENST00000583527 TRMT2AQ8IZ69 625 aaKnown RBP7.21□□□□□ -1.26
CRLF3-204ENST00000583527 TCP11L2Q8N4U5 519 aa7.21□□□□□ -1.26
CRLF3-204ENST00000583527 TSHZ2Q9NRE2 1034 aa7.21□□□□□ -1.26
CRLF3-204ENST00000583527 POLKQ9UBT6 870 aa7.21□□□□□ -1.26
CRLF3-204ENST00000583527 SBNO1A3KN83 1393 aa7.2□□□□□ -1.26
CRLF3-204ENST00000583527 RTL1A6NKG5 1358 aa7.2□□□□□ -1.26
CRLF3-204ENST00000583527 FLT4P35916 1363 aa7.2□□□□□ -1.26
CRLF3-204ENST00000583527 MED1Q15648 1581 aaPredicted RBP7.2□□□□□ -1.26
CRLF3-204ENST00000583527 RGPD2P0DJD1 1756 aa7.2□□□□□ -1.26
CRLF3-204ENST00000583527 N4BP2Q86UW6 1770 aaPredicted RBP7.2□□□□□ -1.26
CRLF3-204ENST00000583527 RSPH6AQ9H0K4 717 aa7.2□□□□□ -1.26
CRLF3-204ENST00000583527 FANCIQ9NVI1 1328 aa7.2□□□□□ -1.26
CRLF3-204ENST00000583527 RRS1Q15050 365 aaKnown RBP7.19□□□□□ -1.26
CRLF3-204ENST00000583527 PLEKHF1Q96S99 279 aa7.19□□□□□ -1.26
CRLF3-204ENST00000583527 ZNF692Q9BU19 519 aaPredicted RBP7.19□□□□□ -1.26
CRLF3-204ENST00000583527 LMO7Q8WWI1 1683 aa7.19□□□□□ -1.26
CRLF3-204ENST00000583527 MST1RQ04912 1400 aa7.18□□□□□ -1.26
CRLF3-204ENST00000583527 PPM1GO15355 546 aaPredicted RBP7.18□□□□□ -1.26
CRLF3-204ENST00000583527 PRKAR2BP31323 418 aa7.18□□□□□ -1.26
CRLF3-204ENST00000583527 IL13P35225 146 aa7.18□□□□□ -1.26
CRLF3-204ENST00000583527 SAMD1Q6SPF0 538 aaPredicted RBP7.18□□□□□ -1.26
CRLF3-204ENST00000583527 EXOC6Q8TAG9 804 aa7.18□□□□□ -1.26
CRLF3-204ENST00000583527 PMFBP1Q8TBY8 1022 aa7.18□□□□□ -1.26
CRLF3-204ENST00000583527 AKT1S1Q96B36 256 aa7.18□□□□□ -1.26
CRLF3-204ENST00000583527 CCDC136Q96JN2 1154 aa7.18□□□□□ -1.26
CRLF3-204ENST00000583527 CRBNQ96SW2 442 aa7.18□□□□□ -1.26
CRLF3-204ENST00000583527 KIF24Q5T7B8 1368 aa7.18□□□□□ -1.26
CRLF3-204ENST00000583527 ABCC6O95255 1503 aa7.17□□□□□ -1.26
CRLF3-204ENST00000583527 PLIN1O60240 522 aa7.17□□□□□ -1.26
CRLF3-204ENST00000583527 FBLN1P23142 703 aa7.17□□□□□ -1.26
CRLF3-204ENST00000583527 TMPOP42166 694 aaKnown RBP7.17□□□□□ -1.26
CRLF3-204ENST00000583527 NEUROD2Q15784 382 aa7.17□□□□□ -1.26
CRLF3-204ENST00000583527 WDR63Q8IWG1 891 aa7.17□□□□□ -1.26
CRLF3-204ENST00000583527 REM2Q8IYK8 340 aaPredicted RBP7.17□□□□□ -1.26
CRLF3-204ENST00000583527 NGDNQ8NEJ9 315 aaKnown RBP7.17□□□□□ -1.26
CRLF3-204ENST00000583527 IL16Q14005 1332 aa7.17□□□□□ -1.26
CRLF3-204ENST00000583527 MAP3K19Q56UN5 1328 aa7.17□□□□□ -1.26
CRLF3-204ENST00000583527 KDRP35968 1356 aa7.17□□□□□ -1.26
CRLF3-204ENST00000583527 C1orf167Q5SNV9 1468 aa7.17□□□□□ -1.26
CRLF3-204ENST00000583527 KDM3BQ7LBC6 1761 aa7.16□□□□□ -1.26
CRLF3-204ENST00000583527 RGPD5Q99666 1765 aa7.16□□□□□ -1.26
CRLF3-204ENST00000583527 C20orf194Q5TEA3 1177 aa7.16□□□□□ -1.26
CRLF3-204ENST00000583527 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.16□□□□□ -1.26
CRLF3-204ENST00000583527 MYH16Q9H6N6 1097 aa7.16□□□□□ -1.26
CRLF3-204ENST00000583527 PHF8Q9UPP1 1060 aa7.16□□□□□ -1.26
CRLF3-204ENST00000583527 NHSL1Q5SYE7 1610 aa7.16□□□□□ -1.26
CRLF3-204ENST00000583527 SOX12O15370 315 aa7.15□□□□□ -1.26
CRLF3-204ENST00000583527 FCHSD2O94868 740 aa7.15□□□□□ -1.26
CRLF3-204ENST00000583527 HMOX1P09601 288 aa7.15□□□□□ -1.26
CRLF3-204ENST00000583527 EIF4A2Q14240 407 aaKnown RBP7.15□□□□□ -1.26
CRLF3-204ENST00000583527 NFE2L2Q16236 605 aa7.15□□□□□ -1.26
CRLF3-204ENST00000583527 PNNQ9H307 717 aaKnown RBP7.15□□□□□ -1.26
CRLF3-204ENST00000583527 TRIM35Q9UPQ4 493 aa7.15□□□□□ -1.26
CRLF3-204ENST00000583527 TMEM94Q12767 1356 aa7.15□□□□□ -1.26
CRLF3-204ENST00000583527 PARP4Q9UKK3 1724 aaKnown RBP7.15□□□□□ -1.27
CRLF3-204ENST00000583527 SIPA1L3O60292 1781 aaPredicted RBP7.14□□□□□ -1.27
CRLF3-204ENST00000583527 NEFMP07197 916 aa7.14□□□□□ -1.27
CRLF3-204ENST00000583527 CANXP27824 592 aaKnown RBP7.14□□□□□ -1.27
CRLF3-204ENST00000583527 NCAPD2Q15021 1401 aa7.14□□□□□ -1.27
CRLF3-204ENST00000583527 C14orf37Q86TY3 774 aa7.14□□□□□ -1.27
CRLF3-204ENST00000583527 AEBP1Q8IUX7 1158 aa7.14□□□□□ -1.27
CRLF3-204ENST00000583527 IGSF1Q8N6C5 1336 aa7.14□□□□□ -1.27
CRLF3-204ENST00000583527 PXDNQ92626 1479 aa7.14□□□□□ -1.27
CRLF3-204ENST00000583527 TSR2Q969E8 191 aaKnown RBP7.14□□□□□ -1.27
CRLF3-204ENST00000583527 RBM33Q96EV2 1170 aaKnown RBP7.14□□□□□ -1.27
CRLF3-204ENST00000583527 NCOA3Q9Y6Q9 1424 aa7.14□□□□□ -1.27
CRLF3-204ENST00000583527 COL18A1P39060 1754 aa7.13□□□□□ -1.27
CRLF3-204ENST00000583527 PKD1L3Q7Z443 1732 aa7.13□□□□□ -1.27
CRLF3-204ENST00000583527 ADAMTS7Q9UKP4 1686 aa7.13□□□□□ -1.27
CRLF3-204ENST00000583527 TNS3Q68CZ2 1445 aa7.13□□□□□ -1.27
CRLF3-204ENST00000583527 USP19O94966 1318 aa7.13□□□□□ -1.27
CRLF3-204ENST00000583527 BCAR3O75815 825 aa7.13□□□□□ -1.27
CRLF3-204ENST00000583527 CT47B1P0C2W7 299 aaPredicted RBP7.13□□□□□ -1.27
CRLF3-204ENST00000583527 FXR2P51116 673 aaKnown RBP eCLIP7.13□□□□□ -1.27
CRLF3-204ENST00000583527 RARSP54136 660 aaKnown RBP7.13□□□□□ -1.27
CRLF3-204ENST00000583527 LMOD3Q0VAK6 560 aa7.13□□□□□ -1.27
CRLF3-204ENST00000583527 KDM2BQ8NHM5 1336 aa7.12□□□□□ -1.27
CRLF3-204ENST00000583527 RIPK4P57078 832 aa7.12□□□□□ -1.27
CRLF3-204ENST00000583527 HSP90AB2PQ58FF8 381 aa7.12□□□□□ -1.27
CRLF3-204ENST00000583527 PHACTR3Q96KR7 559 aa7.12□□□□□ -1.27
CRLF3-204ENST00000583527 BCL2L13Q9BXK5 485 aa7.12□□□□□ -1.27
CRLF3-204ENST00000583527 CACNA1FO60840 1977 aa7.11□□□□□ -1.27
CRLF3-204ENST00000583527 MSH6P52701 1360 aa7.11□□□□□ -1.27
CRLF3-204ENST00000583527 KIF16BQ96L93 1317 aa7.11□□□□□ -1.27
CRLF3-204ENST00000583527 PITPNM1O00562 1244 aa7.11□□□□□ -1.27
CRLF3-204ENST00000583527 NLRP6P59044 892 aa7.11□□□□□ -1.27
CRLF3-204ENST00000583527 CALD1Q05682 793 aaKnown RBP7.11□□□□□ -1.27
CRLF3-204ENST00000583527 EXOSC9Q06265 439 aaKnown RBP7.11□□□□□ -1.27
CRLF3-204ENST00000583527 SULT6B1Q6IMI4 303 aa7.11□□□□□ -1.27
CRLF3-204ENST00000583527 THUMPD2Q9BTF0 503 aaKnown RBP7.11□□□□□ -1.27
CRLF3-204ENST00000583527 SMC4Q9NTJ3 1288 aa7.11□□□□□ -1.27
CRLF3-204ENST00000583527 IFT57Q9NWB7 429 aa7.11□□□□□ -1.27
CRLF3-204ENST00000583527 WNK3Q9BYP7 1800 aa7.11□□□□□ -1.27
CRLF3-204ENST00000583527 CRB1P82279 1406 aa7.1□□□□□ -1.27
CRLF3-204ENST00000583527 HOXC9P31274 260 aa7.1□□□□□ -1.27
CRLF3-204ENST00000583527 HSPA2P54652 639 aa7.1□□□□□ -1.27
CRLF3-204ENST00000583527 PDE3AQ14432 1141 aa7.1□□□□□ -1.27
CRLF3-204ENST00000583527 ESCO1Q5FWF5 840 aa7.1□□□□□ -1.27
CRLF3-204ENST00000583527 NUTM2GQ5VZR2 741 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms