RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 GOLGA6L4A6NEF3 574 aa7.15□□□□□ -1.26
RTTN-209ENST00000583043 LETM1O95202 739 aaPredicted RBP7.15□□□□□ -1.26
RTTN-209ENST00000583043 KDM2BQ8NHM5 1336 aa7.15□□□□□ -1.26
RTTN-209ENST00000583043 ZKSCAN1P17029 563 aaPredicted RBP7.15□□□□□ -1.27
RTTN-209ENST00000583043 BCL2L13Q9BXK5 485 aa7.15□□□□□ -1.27
RTTN-209ENST00000583043 MSNP26038 577 aaKnown RBP7.15□□□□□ -1.27
RTTN-209ENST00000583043 CCDC34Q96HJ3 373 aa7.15□□□□□ -1.27
RTTN-209ENST00000583043 ZC3H13Q5T200 1668 aaKnown RBP7.15□□□□□ -1.27
RTTN-209ENST00000583043 PTMAP06454 111 aaKnown RBP7.14□□□□□ -1.27
RTTN-209ENST00000583043 CARD14Q9BXL6 1004 aa7.14□□□□□ -1.27
RTTN-209ENST00000583043 NLRP6P59044 892 aa7.14□□□□□ -1.27
RTTN-209ENST00000583043 RSPH6AQ9H0K4 717 aa7.14□□□□□ -1.27
RTTN-209ENST00000583043 SLKQ9H2G2 1235 aaPredicted RBP7.14□□□□□ -1.27
RTTN-209ENST00000583043 A0A1W2PP64 1363 aa7.14□□□□□ -1.27
RTTN-209ENST00000583043 UBTFL1P0CB47 393 aaPredicted RBP7.14□□□□□ -1.27
RTTN-209ENST00000583043 HSP90B1P14625 803 aaKnown RBP7.14□□□□□ -1.27
RTTN-209ENST00000583043 SSH1Q8WYL5 1049 aa7.14□□□□□ -1.27
RTTN-209ENST00000583043 AGLP35573 1532 aa7.14□□□□□ -1.27
RTTN-209ENST00000583043 FKBP5Q13451 457 aaPredicted RBP7.14□□□□□ -1.27
RTTN-209ENST00000583043 DHX8Q14562 1220 aaKnown RBP7.13□□□□□ -1.27
RTTN-209ENST00000583043 CLTCL1P53675 1640 aa7.13□□□□□ -1.27
RTTN-209ENST00000583043 BCL11AQ9H165 835 aa7.13□□□□□ -1.27
RTTN-209ENST00000583043 SMC5Q8IY18 1101 aa7.13□□□□□ -1.27
RTTN-209ENST00000583043 KIAA0232Q92628 1395 aa7.13□□□□□ -1.27
RTTN-209ENST00000583043 TPM3P06753 285 aa7.13□□□□□ -1.27
RTTN-209ENST00000583043 SLC4A10Q6U841 1118 aa7.13□□□□□ -1.27
RTTN-209ENST00000583043 SNX21Q969T3 373 aa7.13□□□□□ -1.27
RTTN-209ENST00000583043 NLRP1Q9C000 1473 aa7.13□□□□□ -1.27
RTTN-209ENST00000583043 DLC1Q96QB1 1528 aa7.13□□□□□ -1.27
RTTN-209ENST00000583043 ZBTB7CA1YPR0 619 aa7.13□□□□□ -1.27
RTTN-209ENST00000583043 PSMA5P28066 241 aa7.13□□□□□ -1.27
RTTN-209ENST00000583043 SULT6B1Q6IMI4 303 aa7.13□□□□□ -1.27
RTTN-209ENST00000583043 KLHL34Q8N239 644 aa7.13□□□□□ -1.27
RTTN-209ENST00000583043 PIK3R4Q99570 1358 aa7.13□□□□□ -1.27
RTTN-209ENST00000583043 FLT4P35916 1363 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 TRIM6-TRIM34B2RNG4 842 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 HOXB7P09629 217 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 HMGB2P26583 209 aaKnown RBP7.12□□□□□ -1.27
RTTN-209ENST00000583043 FGD1P98174 961 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 DIAPH3Q9NSV4 1193 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 PLEKHG3A1L390 1219 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 CHAF1AQ13111 956 aaPredicted RBP7.12□□□□□ -1.27
RTTN-209ENST00000583043 CNTROBQ8N137 903 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 DEPDC5O75140 1603 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 GNAT3A8MTJ3 354 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 HMOX1P09601 288 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 CSB-PGBD3P0DP91 1061 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 TTC5Q8N0Z6 440 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 RAPGEF4Q8WZA2 1011 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 CEP152O94986 1710 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 KIAA2012Q0VF49 1180 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 LMOD2Q6P5Q4 547 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 TBC1D32Q96NH3 1257 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 GLI2P10070 1586 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 TRIM27P14373 513 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 PDCP20941 246 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 LNPKQ9C0E8 428 aa7.12□□□□□ -1.27
RTTN-209ENST00000583043 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.12□□□□□ -1.27
RTTN-209ENST00000583043 K7ELQ4 463 aaPredicted RBP7.11□□□□□ -1.27
RTTN-209ENST00000583043 G3BP1Q13283 466 aaKnown RBP eCLIP7.11□□□□□ -1.27
RTTN-209ENST00000583043 TMEM57Q8N5G2 664 aa7.11□□□□□ -1.27
RTTN-209ENST00000583043 LRRCC1Q9C099 1032 aa7.11□□□□□ -1.27
RTTN-209ENST00000583043 NUCB1Q02818 461 aa7.11□□□□□ -1.27
RTTN-209ENST00000583043 TSR2Q969E8 191 aaKnown RBP7.11□□□□□ -1.27
RTTN-209ENST00000583043 ZSCAN31Q96LW9 406 aaPredicted RBP7.11□□□□□ -1.27
RTTN-209ENST00000583043 C9orf78Q9NZ63 289 aaPredicted RBP7.11□□□□□ -1.27
RTTN-209ENST00000583043 BCORL1Q5H9F3 1711 aa7.11□□□□□ -1.27
RTTN-209ENST00000583043 IFIT2P09913 472 aaKnown RBP7.11□□□□□ -1.27
RTTN-209ENST00000583043 CLASRPQ8N2M8 674 aaKnown RBP7.11□□□□□ -1.27
RTTN-209ENST00000583043 UGGT1Q9NYU2 1555 aa7.11□□□□□ -1.27
RTTN-209ENST00000583043 ANKRD1Q15327 319 aa7.11□□□□□ -1.27
RTTN-209ENST00000583043 E9PCH4 1651 aa7.11□□□□□ -1.27
RTTN-209ENST00000583043 TAF7Q15545 349 aaPredicted RBP7.1□□□□□ -1.27
RTTN-209ENST00000583043 SPG7Q9UQ90 795 aa7.1□□□□□ -1.27
RTTN-209ENST00000583043 TPM4P67936 248 aa7.1□□□□□ -1.27
RTTN-209ENST00000583043 ABTB2Q8N961 1025 aa7.1□□□□□ -1.27
RTTN-209ENST00000583043 DDX49Q9Y6V7 483 aaKnown RBP7.1□□□□□ -1.27
RTTN-209ENST00000583043 ARHGEF10O15013 1369 aa7.1□□□□□ -1.27
RTTN-209ENST00000583043 TMEM2Q9UHN6 1383 aa7.1□□□□□ -1.27
RTTN-209ENST00000583043 YEATS2Q9ULM3 1422 aa7.1□□□□□ -1.27
RTTN-209ENST00000583043 PLEKHG1Q9ULL1 1385 aa7.1□□□□□ -1.27
RTTN-209ENST00000583043 ANAPC15P60006 121 aa7.1□□□□□ -1.27
RTTN-209ENST00000583043 AEBP1Q8IUX7 1158 aa7.1□□□□□ -1.27
RTTN-209ENST00000583043 POLKQ9UBT6 870 aa7.1□□□□□ -1.27
RTTN-209ENST00000583043 SBNO1A3KN83 1393 aa7.09□□□□□ -1.27
RTTN-209ENST00000583043 MSH6P52701 1360 aa7.09□□□□□ -1.27
RTTN-209ENST00000583043 AOX1Q06278 1338 aa7.09□□□□□ -1.27
RTTN-209ENST00000583043 SLC4A2P04920 1241 aa7.09□□□□□ -1.27
RTTN-209ENST00000583043 ATF3P18847 181 aa7.09□□□□□ -1.27
RTTN-209ENST00000583043 IQGAP1P46940 1657 aa7.09□□□□□ -1.27
RTTN-209ENST00000583043 MRPL50Q8N5N7 158 aaKnown RBP7.09□□□□□ -1.27
RTTN-209ENST00000583043 C20orf194Q5TEA3 1177 aa7.09□□□□□ -1.27
RTTN-209ENST00000583043 FBXO31Q5XUX0 539 aaPredicted RBP7.09□□□□□ -1.27
RTTN-209ENST00000583043 CDK12Q9NYV4 1490 aaPredicted RBP7.09□□□□□ -1.27
RTTN-209ENST00000583043 ELL2O00472 640 aaPredicted RBP7.09□□□□□ -1.28
RTTN-209ENST00000583043 SOX12O15370 315 aa7.09□□□□□ -1.28
RTTN-209ENST00000583043 HDGFL1Q5TGJ6 251 aa7.09□□□□□ -1.28
RTTN-209ENST00000583043 FAM43AQ8N2R8 423 aa7.08□□□□□ -1.28
RTTN-209ENST00000583043 ANKRD44Q8N8A2 993 aa7.08□□□□□ -1.28
RTTN-209ENST00000583043 ZBTB40Q9NUA8 1239 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms