RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	VARS2	Q5ST30	1063 aa	Known RBP	9.46	□□□□□ -0.9
KPNB1-209	ENST00000580158	NBPF14	Q5TI25	921 aa		9.46	□□□□□ -0.9
KPNB1-209	ENST00000580158	SLC24A1	O60721	1099 aa		9.45	□□□□□ -0.9
KPNB1-209	ENST00000580158	TNS1	Q9HBL0	1735 aa	Known RBP	9.45	□□□□□ -0.9
KPNB1-209	ENST00000580158	KCNQ2	O43526	872 aa		9.44	□□□□□ -0.9
KPNB1-209	ENST00000580158	ESCO1	Q5FWF5	840 aa		9.44	□□□□□ -0.9
KPNB1-209	ENST00000580158	GPR153	Q6NV75	609 aa		9.44	□□□□□ -0.9
KPNB1-209	ENST00000580158	FBXO22	Q8NEZ5	403 aa		9.44	□□□□□ -0.9
KPNB1-209	ENST00000580158	LRPPRC	P42704	1394 aa	Known RBP	9.44	□□□□□ -0.9
KPNB1-209	ENST00000580158	DISP2	A7MBM2	1401 aa		9.44	□□□□□ -0.9
KPNB1-209	ENST00000580158	ADGRB2	O60241	1585 aa		9.44	□□□□□ -0.9
KPNB1-209	ENST00000580158	PLCH1	Q4KWH8	1693 aa		9.44	□□□□□ -0.9
KPNB1-209	ENST00000580158	USP32	Q8NFA0	1604 aa		9.43	□□□□□ -0.9
KPNB1-209	ENST00000580158	NRXN3	Q9Y4C0	1643 aa		9.43	□□□□□ -0.9
KPNB1-209	ENST00000580158	ANKRD30A	Q9BXX3	1397 aa		9.42	□□□□□ -0.9
KPNB1-209	ENST00000580158	MET	P08581	1390 aa		9.41	□□□□□ -0.9
KPNB1-209	ENST00000580158	PARD3	Q8TEW0	1356 aa		9.41	□□□□□ -0.9
KPNB1-209	ENST00000580158	FOXO3	O43524	673 aa		9.41	□□□□□ -0.9
KPNB1-209	ENST00000580158	GIGYF1	O75420	1035 aa	Predicted RBP	9.41	□□□□□ -0.9
KPNB1-209	ENST00000580158	XPC	Q01831	940 aa	Predicted RBP	9.41	□□□□□ -0.9
KPNB1-209	ENST00000580158	FAM98C	Q17RN3	349 aa	Known RBP	9.41	□□□□□ -0.9
KPNB1-209	ENST00000580158	ARSI	Q5FYB1	569 aa		9.41	□□□□□ -0.9
KPNB1-209	ENST00000580158	ZNF687	Q8N1G0	1237 aa		9.41	□□□□□ -0.9
KPNB1-209	ENST00000580158	CAMKK2	Q96RR4	588 aa		9.41	□□□□□ -0.9
KPNB1-209	ENST00000580158	MFRP	Q9BY79	579 aa		9.41	□□□□□ -0.9
KPNB1-209	ENST00000580158	PXDN	Q92626	1479 aa		9.4	□□□□□ -0.9
KPNB1-209	ENST00000580158	ABCC5	O15440	1437 aa		9.4	□□□□□ -0.9
KPNB1-209	ENST00000580158	RREB1	Q92766	1687 aa		9.4	□□□□□ -0.9
KPNB1-209	ENST00000580158	APBA3	O96018	575 aa		9.4	□□□□□ -0.9
KPNB1-209	ENST00000580158	IQGAP3	Q86VI3	1631 aa		9.4	□□□□□ -0.9
KPNB1-209	ENST00000580158	ADGRL2	O95490	1459 aa		9.4	□□□□□ -0.91
KPNB1-209	ENST00000580158	ZNF326	Q5BKZ1	582 aa	Known RBP	9.39	□□□□□ -0.91
KPNB1-209	ENST00000580158	FAM182B	Q5T319	152 aa		9.39	□□□□□ -0.91
KPNB1-209	ENST00000580158	CHIC2	Q9UKJ5	165 aa		9.39	□□□□□ -0.91
KPNB1-209	ENST00000580158	NUP188	Q5SRE5	1749 aa		9.39	□□□□□ -0.91
KPNB1-209	ENST00000580158	TRIM37	O94972	964 aa		9.38	□□□□□ -0.91
KPNB1-209	ENST00000580158		E9PCH4	1651 aa		9.38	□□□□□ -0.91
KPNB1-209	ENST00000580158	DAPK1	P53355	1430 aa		9.38	□□□□□ -0.91
KPNB1-209	ENST00000580158	SPATA31A3	Q5VYP0	1347 aa		9.37	□□□□□ -0.91
KPNB1-209	ENST00000580158	FAM196A	Q6ZSG2	479 aa		9.37	□□□□□ -0.91
KPNB1-209	ENST00000580158	RGL2	O15211	777 aa		9.36	□□□□□ -0.91
KPNB1-209	ENST00000580158	RTN4	Q9NQC3	1192 aa	Known RBP	9.35	□□□□□ -0.91
KPNB1-209	ENST00000580158	NRAP	Q86VF7	1730 aa		9.34	□□□□□ -0.91
KPNB1-209	ENST00000580158	HFM1	A2PYH4	1435 aa		9.34	□□□□□ -0.91
KPNB1-209	ENST00000580158	C2orf72	A6NCS6	295 aa		9.34	□□□□□ -0.91
KPNB1-209	ENST00000580158	ZNF316	A6NFI3	1004 aa	Predicted RBP	9.34	□□□□□ -0.91
KPNB1-209	ENST00000580158	PSME1	Q06323	249 aa		9.34	□□□□□ -0.91
KPNB1-209	ENST00000580158	KRT28	Q7Z3Y7	464 aa		9.34	□□□□□ -0.91
KPNB1-209	ENST00000580158	KIF1A	Q12756	1690 aa		9.33	□□□□□ -0.92
KPNB1-209	ENST00000580158	CABLES1	Q8TDN4	633 aa		9.33	□□□□□ -0.92
KPNB1-209	ENST00000580158	KHSRP	Q92945	711 aa	Known RBP eCLIP	9.33	□□□□□ -0.92
KPNB1-209	ENST00000580158	RNF166	Q96A37	237 aa	Predicted RBP	9.33	□□□□□ -0.92
KPNB1-209	ENST00000580158	BTG4	Q9NY30	223 aa		9.33	□□□□□ -0.92
KPNB1-209	ENST00000580158	ROBO2	Q9HCK4	1378 aa		9.33	□□□□□ -0.92
KPNB1-209	ENST00000580158	ABCA3	Q99758	1704 aa		9.33	□□□□□ -0.92
KPNB1-209	ENST00000580158	CDC42BPG	Q6DT37	1551 aa		9.33	□□□□□ -0.92
KPNB1-209	ENST00000580158	NRK	Q7Z2Y5	1582 aa		9.33	□□□□□ -0.92
KPNB1-209	ENST00000580158	CCDC144A	A2RUR9	1427 aa		9.32	□□□□□ -0.92
KPNB1-209	ENST00000580158	ANKRD50	Q9ULJ7	1429 aa		9.32	□□□□□ -0.92
KPNB1-209	ENST00000580158	FAM83G	A6ND36	823 aa		9.32	□□□□□ -0.92
KPNB1-209	ENST00000580158	KIF3C	O14782	793 aa		9.32	□□□□□ -0.92
KPNB1-209	ENST00000580158	LMOD2	Q6P5Q4	547 aa		9.32	□□□□□ -0.92
KPNB1-209	ENST00000580158	TMC2	Q8TDI7	906 aa		9.32	□□□□□ -0.92
KPNB1-209	ENST00000580158	KIF1B	O60333	1816 aa		9.31	□□□□□ -0.92
KPNB1-209	ENST00000580158	NUTM2F	A1L443	756 aa		9.31	□□□□□ -0.92
KPNB1-209	ENST00000580158	SYT17	Q9BSW7	474 aa		9.31	□□□□□ -0.92
KPNB1-209	ENST00000580158	MYOM1	P52179	1685 aa		9.31	□□□□□ -0.92
KPNB1-209	ENST00000580158	THSD7A	Q9UPZ6	1657 aa		9.31	□□□□□ -0.92
KPNB1-209	ENST00000580158	COL14A1	Q05707	1796 aa	Known RBP	9.31	□□□□□ -0.92
KPNB1-209	ENST00000580158	RGPD8	O14715	1765 aa	Predicted RBP	9.3	□□□□□ -0.92
KPNB1-209	ENST00000580158	ANKRD13D	Q6ZTN6	518 aa		9.3	□□□□□ -0.92
KPNB1-209	ENST00000580158	TNS3	Q68CZ2	1445 aa		9.3	□□□□□ -0.92
KPNB1-209	ENST00000580158	SPATA31A5	Q5VU36	1347 aa		9.3	□□□□□ -0.92
KPNB1-209	ENST00000580158	SPATA31A7	Q8IWB4	1347 aa		9.3	□□□□□ -0.92
KPNB1-209	ENST00000580158	PTGER2	P43116	358 aa		9.29	□□□□□ -0.92
KPNB1-209	ENST00000580158	PDE3B	Q13370	1112 aa		9.29	□□□□□ -0.92
KPNB1-209	ENST00000580158	KANK4	Q5T7N3	995 aa	Predicted RBP	9.29	□□□□□ -0.92
KPNB1-209	ENST00000580158	NEXMIF	Q5QGS0	1516 aa		9.29	□□□□□ -0.92
KPNB1-209	ENST00000580158	CASZ1	Q86V15	1759 aa		9.29	□□□□□ -0.92
KPNB1-209	ENST00000580158	UTRN	P46939	3433 aa		9.28	□□□□□ -0.92
KPNB1-209	ENST00000580158	ARHGEF10	O15013	1369 aa		9.28	□□□□□ -0.92
KPNB1-209	ENST00000580158	DLC1	Q96QB1	1528 aa		9.28	□□□□□ -0.92
KPNB1-209	ENST00000580158	SLC34A2	O95436	690 aa		9.28	□□□□□ -0.92
KPNB1-209	ENST00000580158	AMER1	Q5JTC6	1135 aa	Predicted RBP	9.28	□□□□□ -0.92
KPNB1-209	ENST00000580158	FHDC1	Q9C0D6	1143 aa	Predicted RBP	9.28	□□□□□ -0.92
KPNB1-209	ENST00000580158	CEP350	Q5VT06	3117 aa		9.28	□□□□□ -0.92
KPNB1-209	ENST00000580158	ZBTB7A	O95365	584 aa		9.27	□□□□□ -0.93
KPNB1-209	ENST00000580158	NUDT7	P0C024	238 aa		9.27	□□□□□ -0.93
KPNB1-209	ENST00000580158	GPR162	Q16538	588 aa		9.27	□□□□□ -0.93
KPNB1-209	ENST00000580158	PRAG1	Q86YV5	1406 aa		9.27	□□□□□ -0.93
KPNB1-209	ENST00000580158	FMN2	Q9NZ56	1722 aa		9.26	□□□□□ -0.93
KPNB1-209	ENST00000580158	NAIP	Q13075	1403 aa		9.26	□□□□□ -0.93
KPNB1-209	ENST00000580158	PCDHGA4	Q9Y5G9	962 aa		9.26	□□□□□ -0.93
KPNB1-209	ENST00000580158	RGPD3	A6NKT7	1758 aa	Predicted RBP	9.26	□□□□□ -0.93
KPNB1-209	ENST00000580158	RGPD4	Q7Z3J3	1758 aa		9.26	□□□□□ -0.93
KPNB1-209	ENST00000580158	SBNO1	A3KN83	1393 aa		9.25	□□□□□ -0.93
KPNB1-209	ENST00000580158	RRBP1	Q9P2E9	1410 aa	Known RBP	9.25	□□□□□ -0.93
KPNB1-209	ENST00000580158	C11orf95	C9JLR9	678 aa	Predicted RBP	9.25	□□□□□ -0.93
KPNB1-209	ENST00000580158	HSPA6	P17066	643 aa		9.25	□□□□□ -0.93
KPNB1-209	ENST00000580158	PPP1R37	O75864	691 aa		9.24	□□□□□ -0.93

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