RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 LARP6Q9BRS8 491 aaKnown RBP16.33■□□□□ 0.2
TRAPPC8-207ENST00000580104 F6X3S4 739 aa16.33■□□□□ 0.2
TRAPPC8-207ENST00000580104 FSD1Q9BTV5 496 aa16.33■□□□□ 0.2
TRAPPC8-207ENST00000580104 TSHZ3Q63HK5 1081 aa16.33■□□□□ 0.2
TRAPPC8-207ENST00000580104 PRDM10Q9NQV6 1147 aa16.33■□□□□ 0.2
TRAPPC8-207ENST00000580104 HDAC1Q13547 482 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC8-207ENST00000580104 CCDC73Q6ZRK6 1079 aa16.32■□□□□ 0.2
TRAPPC8-207ENST00000580104 CWC27Q6UX04 472 aaKnown RBP16.32■□□□□ 0.2
TRAPPC8-207ENST00000580104 WAPLQ7Z5K2 1190 aa16.32■□□□□ 0.2
TRAPPC8-207ENST00000580104 CCT4P50991 539 aaKnown RBP16.32■□□□□ 0.2
TRAPPC8-207ENST00000580104 NUCB1Q02818 461 aa16.32■□□□□ 0.2
TRAPPC8-207ENST00000580104 NUTM1Q86Y26 1132 aa16.32■□□□□ 0.2
TRAPPC8-207ENST00000580104 DDX54Q8TDD1 881 aaKnown RBP16.31■□□□□ 0.2
TRAPPC8-207ENST00000580104 ASXL1Q8IXJ9 1541 aa16.31■□□□□ 0.2
TRAPPC8-207ENST00000580104 HDGFL1Q5TGJ6 251 aa16.31■□□□□ 0.2
TRAPPC8-207ENST00000580104 FMNL2Q96PY5 1086 aa16.31■□□□□ 0.2
TRAPPC8-207ENST00000580104 FAM83GA6ND36 823 aa16.31■□□□□ 0.2
TRAPPC8-207ENST00000580104 LETM1O95202 739 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC8-207ENST00000580104 CYB5RLQ6IPT4 315 aa16.3■□□□□ 0.2
TRAPPC8-207ENST00000580104 CPLX1O14810 134 aa16.3■□□□□ 0.2
TRAPPC8-207ENST00000580104 SDF4Q9BRK5 362 aa16.3■□□□□ 0.2
TRAPPC8-207ENST00000580104 FERMT3Q86UX7 667 aa16.3■□□□□ 0.2
TRAPPC8-207ENST00000580104 KLHL40Q2TBA0 621 aa16.29■□□□□ 0.2
TRAPPC8-207ENST00000580104 ATAD2Q6PL18 1390 aa16.29■□□□□ 0.2
TRAPPC8-207ENST00000580104 CTTNBP2Q8WZ74 1663 aa16.29■□□□□ 0.2
TRAPPC8-207ENST00000580104 A0A0U1RQG5 324 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC8-207ENST00000580104 NME9Q86XW9 330 aa16.29■□□□□ 0.2
TRAPPC8-207ENST00000580104 NEUROD6Q96NK8 337 aa16.29■□□□□ 0.2
TRAPPC8-207ENST00000580104 USP25Q9UHP3 1055 aa16.29■□□□□ 0.2
TRAPPC8-207ENST00000580104 SRGAP3O43295 1099 aa16.28■□□□□ 0.2
TRAPPC8-207ENST00000580104 KDM4AO75164 1064 aa16.28■□□□□ 0.2
TRAPPC8-207ENST00000580104 CCDC192P0DO97 292 aa16.28■□□□□ 0.2
TRAPPC8-207ENST00000580104 GAS2L2Q8NHY3 880 aa16.28■□□□□ 0.2
TRAPPC8-207ENST00000580104 ZMYND15Q9H091 742 aa16.28■□□□□ 0.2
TRAPPC8-207ENST00000580104 LARP1BQ659C4 914 aaKnown RBP16.28■□□□□ 0.2
TRAPPC8-207ENST00000580104 CYP46A1Q9Y6A2 500 aa16.28■□□□□ 0.2
TRAPPC8-207ENST00000580104 NOS1P29475 1434 aa16.28■□□□□ 0.2
TRAPPC8-207ENST00000580104 PES1O00541 588 aaKnown RBP16.28■□□□□ 0.2
TRAPPC8-207ENST00000580104 ZSCAN23Q3MJ62 389 aa16.28■□□□□ 0.2
TRAPPC8-207ENST00000580104 ABCC11Q96J66 1382 aa16.28■□□□□ 0.2
TRAPPC8-207ENST00000580104 RIC3Q7Z5B4 369 aa16.27■□□□□ 0.2
TRAPPC8-207ENST00000580104 C16orf71Q8IYS4 520 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC8-207ENST00000580104 JAKMIP1Q96N16 626 aaKnown RBP16.27■□□□□ 0.2
TRAPPC8-207ENST00000580104 SIL1Q9H173 461 aa16.27■□□□□ 0.2
TRAPPC8-207ENST00000580104 LAMC3Q9Y6N6 1575 aa16.27■□□□□ 0.2
TRAPPC8-207ENST00000580104 DDX58O95786 925 aaKnown RBP16.27■□□□□ 0.2
TRAPPC8-207ENST00000580104 PSMA5P28066 241 aa16.27■□□□□ 0.2
TRAPPC8-207ENST00000580104 MX1P20591 662 aa16.27■□□□□ 0.19
TRAPPC8-207ENST00000580104 CAMK4Q16566 473 aa16.27■□□□□ 0.19
TRAPPC8-207ENST00000580104 TNMDQ9H2S6 317 aa16.26■□□□□ 0.19
TRAPPC8-207ENST00000580104 MBIPQ9NS73 344 aa16.26■□□□□ 0.19
TRAPPC8-207ENST00000580104 RTEL1-TNFRSF6BF6WH68 1400 aa16.26■□□□□ 0.19
TRAPPC8-207ENST00000580104 RASSF8Q8NHQ8 419 aa16.26■□□□□ 0.19
TRAPPC8-207ENST00000580104 FAM135AQ9P2D6 1515 aa16.26■□□□□ 0.19
TRAPPC8-207ENST00000580104 DNAJC2Q99543 621 aaKnown RBP16.26■□□□□ 0.19
TRAPPC8-207ENST00000580104 RPGRIP1LQ68CZ1 1315 aa16.26■□□□□ 0.19
TRAPPC8-207ENST00000580104 APPP05067 770 aa16.25■□□□□ 0.19
TRAPPC8-207ENST00000580104 SRCIN1Q9C0H9 1055 aa16.25■□□□□ 0.19
TRAPPC8-207ENST00000580104 PDCL3Q9H2J4 239 aa16.25■□□□□ 0.19
TRAPPC8-207ENST00000580104 TPM3P06753 285 aa16.25■□□□□ 0.19
TRAPPC8-207ENST00000580104 PDCP20941 246 aa16.25■□□□□ 0.19
TRAPPC8-207ENST00000580104 CASTP20810 708 aaKnown RBP16.25■□□□□ 0.19
TRAPPC8-207ENST00000580104 CCDC34Q96HJ3 373 aa16.25■□□□□ 0.19
TRAPPC8-207ENST00000580104 CCDC83Q8IWF9 413 aa16.25■□□□□ 0.19
TRAPPC8-207ENST00000580104 SLC52A1Q9NWF4 448 aa16.25■□□□□ 0.19
TRAPPC8-207ENST00000580104 KRT85P78386 507 aa16.24■□□□□ 0.19
TRAPPC8-207ENST00000580104 RAPGEF6Q8TEU7 1601 aa16.24■□□□□ 0.19
TRAPPC8-207ENST00000580104 CBX1P83916 185 aa16.24■□□□□ 0.19
TRAPPC8-207ENST00000580104 TTC22Q5TAA0 569 aa16.24■□□□□ 0.19
TRAPPC8-207ENST00000580104 TTC5Q8N0Z6 440 aa16.24■□□□□ 0.19
TRAPPC8-207ENST00000580104 KDM6BO15054 1643 aa16.24■□□□□ 0.19
TRAPPC8-207ENST00000580104 COL17A1Q9UMD9 1497 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC8-207ENST00000580104 GOLGA6L1Q8N7Z2 621 aa16.23■□□□□ 0.19
TRAPPC8-207ENST00000580104 PDRG1Q9NUG6 133 aa16.23■□□□□ 0.19
TRAPPC8-207ENST00000580104 UHRF1BP1Q6BDS2 1440 aa16.23■□□□□ 0.19
TRAPPC8-207ENST00000580104 SDSP20132 328 aa16.23■□□□□ 0.19
TRAPPC8-207ENST00000580104 MAGI3Q5TCQ9 1506 aa16.23■□□□□ 0.19
TRAPPC8-207ENST00000580104 ATP10BO94823 1461 aa16.23■□□□□ 0.19
TRAPPC8-207ENST00000580104 KINO60870 393 aaKnown RBP16.23■□□□□ 0.19
TRAPPC8-207ENST00000580104 MNS1Q8NEH6 495 aa16.23■□□□□ 0.19
TRAPPC8-207ENST00000580104 ZNF830Q96NB3 372 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC8-207ENST00000580104 C14orf93Q9H972 538 aaKnown RBP16.23■□□□□ 0.19
TRAPPC8-207ENST00000580104 PSME1Q06323 249 aa16.22■□□□□ 0.19
TRAPPC8-207ENST00000580104 SYNE3Q6ZMZ3 975 aa16.22■□□□□ 0.19
TRAPPC8-207ENST00000580104 ZMYM4Q5VZL5 1548 aa16.22■□□□□ 0.19
TRAPPC8-207ENST00000580104 SMC2O95347 1197 aa16.22■□□□□ 0.19
TRAPPC8-207ENST00000580104 RAB3GAP1Q15042 981 aa16.22■□□□□ 0.19
TRAPPC8-207ENST00000580104 ABTB2Q8N961 1025 aa16.22■□□□□ 0.19
TRAPPC8-207ENST00000580104 TSPYL6Q8N831 410 aa16.22■□□□□ 0.19
TRAPPC8-207ENST00000580104 SNX21Q969T3 373 aa16.22■□□□□ 0.19
TRAPPC8-207ENST00000580104 ZBTB40Q9NUA8 1239 aa16.22■□□□□ 0.19
TRAPPC8-207ENST00000580104 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
TRAPPC8-207ENST00000580104 SMC5Q8IY18 1101 aa16.22■□□□□ 0.19
TRAPPC8-207ENST00000580104 POLR3AO14802 1390 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC8-207ENST00000580104 PIK3C2GO75747 1445 aa16.21■□□□□ 0.19
TRAPPC8-207ENST00000580104 FILIP1Q7Z7B0 1213 aa16.21■□□□□ 0.19
TRAPPC8-207ENST00000580104 NUDT16Q96DE0 195 aaKnown RBP16.21■□□□□ 0.19
TRAPPC8-207ENST00000580104 WDR62O43379 1518 aa16.21■□□□□ 0.19
TRAPPC8-207ENST00000580104 IDI1Q13907 227 aa16.21■□□□□ 0.19
TRAPPC8-207ENST00000580104 CCDC112Q8NEF3 446 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms