RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 ITSN1Q15811 1721 aa5.04□□□□□ -1.6
CDH19-204ENST00000579658 PHRF1Q9P1Y6 1649 aaKnown RBP5.04□□□□□ -1.6
CDH19-204ENST00000579658 GPRASP1Q5JY77 1395 aa5.04□□□□□ -1.6
CDH19-204ENST00000579658 HSPA6P17066 643 aa5.04□□□□□ -1.6
CDH19-204ENST00000579658 TRIM26Q12899 539 aaPredicted RBP5.04□□□□□ -1.6
CDH19-204ENST00000579658 MTFR1LQ9H019 292 aa5.04□□□□□ -1.6
CDH19-204ENST00000579658 RGPD8O14715 1765 aaPredicted RBP5.04□□□□□ -1.6
CDH19-204ENST00000579658 ABCB7O75027 752 aa5.04□□□□□ -1.6
CDH19-204ENST00000579658 XPCQ01831 940 aaPredicted RBP5.04□□□□□ -1.6
CDH19-204ENST00000579658 WNK3Q9BYP7 1800 aa5.03□□□□□ -1.6
CDH19-204ENST00000579658 ANKRD30BQ9BXX2 1392 aa5.03□□□□□ -1.6
CDH19-204ENST00000579658 MAMSTRQ6ZN01 415 aa5.03□□□□□ -1.6
CDH19-204ENST00000579658 SYT17Q9BSW7 474 aa5.03□□□□□ -1.6
CDH19-204ENST00000579658 STK32BQ9NY57 414 aa5.03□□□□□ -1.6
CDH19-204ENST00000579658 GRIN3BO60391 1043 aa5.03□□□□□ -1.6
CDH19-204ENST00000579658 PTGER2P43116 358 aa5.03□□□□□ -1.6
CDH19-204ENST00000579658 AKAP12Q02952 1782 aa5.03□□□□□ -1.6
CDH19-204ENST00000579658 SLC34A2O95436 690 aa5.02□□□□□ -1.61
CDH19-204ENST00000579658 TOPAZ1Q8N9V7 1692 aa5.02□□□□□ -1.61
CDH19-204ENST00000579658 SSH2Q76I76 1423 aa5.02□□□□□ -1.61
CDH19-204ENST00000579658 FHDC1Q9C0D6 1143 aaPredicted RBP5.02□□□□□ -1.61
CDH19-204ENST00000579658 PRDM11Q9NQV5 511 aa5.02□□□□□ -1.61
CDH19-204ENST00000579658 LMO7Q8WWI1 1683 aa5.01□□□□□ -1.61
CDH19-204ENST00000579658 APLP1P51693 650 aa5.01□□□□□ -1.61
CDH19-204ENST00000579658 PROM2Q8N271 834 aa5.01□□□□□ -1.61
CDH19-204ENST00000579658 BCL11BQ9C0K0 894 aaPredicted RBP5.01□□□□□ -1.61
CDH19-204ENST00000579658 PODXL2Q9NZ53 605 aa5.01□□□□□ -1.61
CDH19-204ENST00000579658 YTHDC2Q9H6S0 1430 aaKnown RBP5.01□□□□□ -1.61
CDH19-204ENST00000579658 BRD4O60885 1362 aaPredicted RBP5.01□□□□□ -1.61
CDH19-204ENST00000579658 LRRC37A3O60309 1634 aa5.01□□□□□ -1.61
CDH19-204ENST00000579658 PRELPP51888 382 aa5.01□□□□□ -1.61
CDH19-204ENST00000579658 GPR162Q16538 588 aa5.01□□□□□ -1.61
CDH19-204ENST00000579658 TCP11L2Q8N4U5 519 aa5.01□□□□□ -1.61
CDH19-204ENST00000579658 CABLES1Q8TDN4 633 aa5.01□□□□□ -1.61
CDH19-204ENST00000579658 SLC16A10Q8TF71 515 aa5.01□□□□□ -1.61
CDH19-204ENST00000579658 SGIP1Q9BQI5 828 aa5.01□□□□□ -1.61
CDH19-204ENST00000579658 CDCA7Q9BWT1 371 aaPredicted RBP5.01□□□□□ -1.61
CDH19-204ENST00000579658 TULP4Q9NRJ4 1543 aa5□□□□□ -1.61
CDH19-204ENST00000579658 CPDO75976 1380 aa5□□□□□ -1.61
CDH19-204ENST00000579658 HMGB2P26583 209 aaKnown RBP5□□□□□ -1.61
CDH19-204ENST00000579658 FBXO3Q9UK99 471 aa5□□□□□ -1.61
CDH19-204ENST00000579658 PAPPAQ13219 1627 aa5□□□□□ -1.61
CDH19-204ENST00000579658 LMOD2Q6P5Q4 547 aa5□□□□□ -1.61
CDH19-204ENST00000579658 ZBTB4Q9P1Z0 1013 aaPredicted RBP5□□□□□ -1.61
CDH19-204ENST00000579658 NHSQ6T4R5 1651 aa4.99□□□□□ -1.61
CDH19-204ENST00000579658 SLC15A2Q16348 729 aa4.99□□□□□ -1.61
CDH19-204ENST00000579658 FAM182BQ5T319 152 aa4.99□□□□□ -1.61
CDH19-204ENST00000579658 ACIN1Q9UKV3 1341 aaKnown RBP4.99□□□□□ -1.61
CDH19-204ENST00000579658 PIK3C2GO75747 1445 aa4.99□□□□□ -1.61
CDH19-204ENST00000579658 ATP10DQ9P241 1426 aa4.99□□□□□ -1.61
CDH19-204ENST00000579658 POLD1P28340 1107 aa4.99□□□□□ -1.61
CDH19-204ENST00000579658 EVA1CP58658 441 aa4.99□□□□□ -1.61
CDH19-204ENST00000579658 CRB1P82279 1406 aa4.98□□□□□ -1.61
CDH19-204ENST00000579658 ADCY9O60503 1353 aa4.98□□□□□ -1.61
CDH19-204ENST00000579658 ZBTB7AO95365 584 aa4.98□□□□□ -1.61
CDH19-204ENST00000579658 ZEB1P37275 1124 aaPredicted RBP4.98□□□□□ -1.61
CDH19-204ENST00000579658 ANO8Q9HCE9 1232 aaPredicted RBP4.98□□□□□ -1.61
CDH19-204ENST00000579658 ARHGEF28Q8N1W1 1705 aaKnown RBP4.98□□□□□ -1.61
CDH19-204ENST00000579658 TRPM1Q7Z4N2 1603 aa4.98□□□□□ -1.61
CDH19-204ENST00000579658 WDR90Q96KV7 1748 aa4.98□□□□□ -1.61
CDH19-204ENST00000579658 KIAA0232Q92628 1395 aa4.98□□□□□ -1.61
CDH19-204ENST00000579658 RGL2O15211 777 aa4.98□□□□□ -1.61
CDH19-204ENST00000579658 ERICH6Q7L0X2 663 aa4.98□□□□□ -1.61
CDH19-204ENST00000579658 GPBP1L1Q9HC44 474 aaPredicted RBP4.98□□□□□ -1.61
CDH19-204ENST00000579658 ABCC6O95255 1503 aa4.97□□□□□ -1.61
CDH19-204ENST00000579658 WAPLQ7Z5K2 1190 aa4.97□□□□□ -1.61
CDH19-204ENST00000579658 DCBLD2Q96PD2 775 aa4.97□□□□□ -1.61
CDH19-204ENST00000579658 SRCAPQ6ZRS2 3230 aa4.97□□□□□ -1.61
CDH19-204ENST00000579658 PLEKHH1Q9ULM0 1364 aa4.97□□□□□ -1.61
CDH19-204ENST00000579658 SPDYE4A6NLX3 237 aa4.97□□□□□ -1.61
CDH19-204ENST00000579658 PITPNM1O00562 1244 aa4.97□□□□□ -1.61
CDH19-204ENST00000579658 EIF5BO60841 1220 aaKnown RBP4.97□□□□□ -1.61
CDH19-204ENST00000579658 NUTM2FA1L443 756 aa4.96□□□□□ -1.62
CDH19-204ENST00000579658 STRN4Q9NRL3 753 aa4.96□□□□□ -1.62
CDH19-204ENST00000579658 COL5A2P05997 1499 aaPredicted RBP4.96□□□□□ -1.62
CDH19-204ENST00000579658 PIK3C2AO00443 1686 aa4.96□□□□□ -1.62
CDH19-204ENST00000579658 RAB3GAP2Q9H2M9 1393 aa4.96□□□□□ -1.62
CDH19-204ENST00000579658 CICQ96RK0 1608 aaPredicted RBP4.96□□□□□ -1.62
CDH19-204ENST00000579658 MKRN4PQ13434 485 aaPredicted RBP4.96□□□□□ -1.62
CDH19-204ENST00000579658 TXNRD1Q16881 649 aa4.96□□□□□ -1.62
CDH19-204ENST00000579658 TNS4Q8IZW8 715 aa4.96□□□□□ -1.62
CDH19-204ENST00000579658 SPRYD3Q8NCJ5 442 aa4.96□□□□□ -1.62
CDH19-204ENST00000579658 NBR1Q14596 966 aa4.95□□□□□ -1.62
CDH19-204ENST00000579658 DDB1Q16531 1140 aa4.95□□□□□ -1.62
CDH19-204ENST00000579658 JMYQ8N9B5 988 aa4.95□□□□□ -1.62
CDH19-204ENST00000579658 STK26Q9P289 416 aa4.95□□□□□ -1.62
CDH19-204ENST00000579658 USP19O94966 1318 aa4.95□□□□□ -1.62
CDH19-204ENST00000579658 SPATA31E1Q6ZUB1 1445 aa4.95□□□□□ -1.62
CDH19-204ENST00000579658 SPNS2Q8IVW8 549 aa4.94□□□□□ -1.62
CDH19-204ENST00000579658 NGDNQ8NEJ9 315 aaKnown RBP4.94□□□□□ -1.62
CDH19-204ENST00000579658 C14orf93Q9H972 538 aaKnown RBP4.94□□□□□ -1.62
CDH19-204ENST00000579658 POLR3AO14802 1390 aaPredicted RBP4.94□□□□□ -1.62
CDH19-204ENST00000579658 QRICH2Q9H0J4 1663 aa4.94□□□□□ -1.62
CDH19-204ENST00000579658 SLC27A3Q5K4L6 730 aa4.94□□□□□ -1.62
CDH19-204ENST00000579658 SAMD1Q6SPF0 538 aaPredicted RBP4.94□□□□□ -1.62
CDH19-204ENST00000579658 ADGRF5Q8IZF2 1346 aa4.94□□□□□ -1.62
CDH19-204ENST00000579658 C10orf71Q711Q0 1435 aa4.94□□□□□ -1.62
CDH19-204ENST00000579658 ECM2O94769 699 aaPredicted RBP4.93□□□□□ -1.62
CDH19-204ENST00000579658 LARP1Q6PKG0 1096 aaKnown RBP4.93□□□□□ -1.62
CDH19-204ENST00000579658 PELP1Q8IZL8 1130 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms