RNA–Protein interactions for RNA: ENST00000578386.5

SMURF2-203, Transcript of SMAD specific E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene SMURF2, Length 3,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF2-203ENST00000578386 NEFMP07197 916 aa13.41□□□□□ -0.26
SMURF2-203ENST00000578386 CCDC27Q2M243 656 aa13.41□□□□□ -0.26
SMURF2-203ENST00000578386 TCERG1O14776 1098 aaKnown RBP13.4□□□□□ -0.26
SMURF2-203ENST00000578386 LMOD2Q6P5Q4 547 aa13.4□□□□□ -0.26
SMURF2-203ENST00000578386 NGEFQ8N5V2 710 aa13.4□□□□□ -0.26
SMURF2-203ENST00000578386 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.4□□□□□ -0.26
SMURF2-203ENST00000578386 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
SMURF2-203ENST00000578386 OVOS2A0A0J9YW53 1432 aa13.4□□□□□ -0.26
SMURF2-203ENST00000578386 OVOS2Q6IE36 1432 aa13.4□□□□□ -0.26
SMURF2-203ENST00000578386 FOXO3O43524 673 aa13.39□□□□□ -0.27
SMURF2-203ENST00000578386 AATKQ6ZMQ8 1374 aa13.39□□□□□ -0.27
SMURF2-203ENST00000578386 MYH16Q9H6N6 1097 aa13.39□□□□□ -0.27
SMURF2-203ENST00000578386 RLBP1P12271 317 aa13.39□□□□□ -0.27
SMURF2-203ENST00000578386 AMPHP49418 695 aa13.39□□□□□ -0.27
SMURF2-203ENST00000578386 PROSER2Q86WR7 435 aaPredicted RBP13.39□□□□□ -0.27
SMURF2-203ENST00000578386 PIK3C2AO00443 1686 aa13.39□□□□□ -0.27
SMURF2-203ENST00000578386 CDK12Q9NYV4 1490 aaPredicted RBP13.38□□□□□ -0.27
SMURF2-203ENST00000578386 MARF1Q9Y4F3 1742 aaKnown RBP13.38□□□□□ -0.27
SMURF2-203ENST00000578386 PEAK1Q9H792 1746 aa13.38□□□□□ -0.27
SMURF2-203ENST00000578386 ANKARQ7Z5J8 1434 aa13.38□□□□□ -0.27
SMURF2-203ENST00000578386 NFE2L2Q16236 605 aa13.37□□□□□ -0.27
SMURF2-203ENST00000578386 DDX17Q92841 729 aaKnown RBP13.37□□□□□ -0.27
SMURF2-203ENST00000578386 NWD1Q149M9 1564 aa13.37□□□□□ -0.27
SMURF2-203ENST00000578386 PSME1Q06323 249 aa13.37□□□□□ -0.27
SMURF2-203ENST00000578386 PNNQ9H307 717 aaKnown RBP13.36□□□□□ -0.27
SMURF2-203ENST00000578386 USHBP1Q8N6Y0 703 aa13.35□□□□□ -0.27
SMURF2-203ENST00000578386 SMC4Q9NTJ3 1288 aa13.35□□□□□ -0.27
SMURF2-203ENST00000578386 MCM10Q7L590 875 aa13.35□□□□□ -0.27
SMURF2-203ENST00000578386 SSH1Q8WYL5 1049 aa13.35□□□□□ -0.27
SMURF2-203ENST00000578386 TSPYL6Q8N831 410 aa13.35□□□□□ -0.27
SMURF2-203ENST00000578386 TTC21AQ8NDW8 1320 aa13.34□□□□□ -0.27
SMURF2-203ENST00000578386 ADGRL3Q9HAR2 1447 aa13.34□□□□□ -0.27
SMURF2-203ENST00000578386 USP31Q70CQ4 1352 aa13.34□□□□□ -0.27
SMURF2-203ENST00000578386 STRCP1A6NGW2 1772 aa13.34□□□□□ -0.27
SMURF2-203ENST00000578386 MIS18AQ9NYP9 233 aa13.33□□□□□ -0.27
SMURF2-203ENST00000578386 KRT24Q2M2I5 525 aa13.33□□□□□ -0.28
SMURF2-203ENST00000578386 EYA1Q99502 592 aa13.33□□□□□ -0.28
SMURF2-203ENST00000578386 USP54Q70EL1 1684 aa13.32□□□□□ -0.28
SMURF2-203ENST00000578386 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
SMURF2-203ENST00000578386 MBIPQ9NS73 344 aa13.31□□□□□ -0.28
SMURF2-203ENST00000578386 IGHDP01880 384 aa13.31□□□□□ -0.28
SMURF2-203ENST00000578386 NOB1Q9ULX3 412 aaKnown RBP13.31□□□□□ -0.28
SMURF2-203ENST00000578386 RGPD1P0DJD0 1748 aa13.31□□□□□ -0.28
SMURF2-203ENST00000578386 HOXC9P31274 260 aa13.3□□□□□ -0.28
SMURF2-203ENST00000578386 DLG5Q8TDM6 1919 aa13.3□□□□□ -0.28
SMURF2-203ENST00000578386 RGS3P49796 1198 aa13.3□□□□□ -0.28
SMURF2-203ENST00000578386 MTHFSDQ2M296 383 aaKnown RBP13.29□□□□□ -0.28
SMURF2-203ENST00000578386 C8orf58Q8NAV2 365 aa13.29□□□□□ -0.28
SMURF2-203ENST00000578386 FLT4P35916 1363 aa13.29□□□□□ -0.28
SMURF2-203ENST00000578386 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
SMURF2-203ENST00000578386 FTSJ3Q8IY81 847 aaKnown RBP13.29□□□□□ -0.28
SMURF2-203ENST00000578386 TRIM27P14373 513 aa13.28□□□□□ -0.28
SMURF2-203ENST00000578386 PDE3AQ14432 1141 aa13.28□□□□□ -0.28
SMURF2-203ENST00000578386 SBNO1A3KN83 1393 aa13.28□□□□□ -0.28
SMURF2-203ENST00000578386 KDM2BQ8NHM5 1336 aa13.28□□□□□ -0.28
SMURF2-203ENST00000578386 ZKSCAN2Q63HK3 967 aa13.28□□□□□ -0.28
SMURF2-203ENST00000578386 LRRC59Q96AG4 307 aaKnown RBP13.27□□□□□ -0.28
SMURF2-203ENST00000578386 PCDHB15Q9Y5E8 787 aa13.27□□□□□ -0.28
SMURF2-203ENST00000578386 TMEM94Q12767 1356 aa13.27□□□□□ -0.28
SMURF2-203ENST00000578386 IL16Q14005 1332 aa13.27□□□□□ -0.29
SMURF2-203ENST00000578386 ITPRIPQ8IWB1 547 aa13.26□□□□□ -0.29
SMURF2-203ENST00000578386 GNAI1P63096 354 aa13.26□□□□□ -0.29
SMURF2-203ENST00000578386 KRT28Q7Z3Y7 464 aa13.26□□□□□ -0.29
SMURF2-203ENST00000578386 DZIP1LQ8IYY4 767 aaKnown RBP13.26□□□□□ -0.29
SMURF2-203ENST00000578386 VAMP4O75379 141 aa13.26□□□□□ -0.29
SMURF2-203ENST00000578386 NPM2Q86SE8 214 aaKnown RBP13.26□□□□□ -0.29
SMURF2-203ENST00000578386 C19orf44Q9H6X5 657 aa13.26□□□□□ -0.29
SMURF2-203ENST00000578386 ZC3H6P61129 1189 aaKnown RBP13.25□□□□□ -0.29
SMURF2-203ENST00000578386 CABLES1Q8TDN4 633 aa13.25□□□□□ -0.29
SMURF2-203ENST00000578386 ATF3P18847 181 aa13.25□□□□□ -0.29
SMURF2-203ENST00000578386 TWISTNBQ3B726 338 aaPredicted RBP13.25□□□□□ -0.29
SMURF2-203ENST00000578386 TMEM57Q8N5G2 664 aa13.25□□□□□ -0.29
SMURF2-203ENST00000578386 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
SMURF2-203ENST00000578386 STRCQ7RTU9 1775 aa13.25□□□□□ -0.29
SMURF2-203ENST00000578386 IFT57Q9NWB7 429 aa13.24□□□□□ -0.29
SMURF2-203ENST00000578386 LMTK3Q96Q04 1460 aa13.24□□□□□ -0.29
SMURF2-203ENST00000578386 ZNF853P0CG23 659 aa13.24□□□□□ -0.29
SMURF2-203ENST00000578386 NBPF6Q5VWK0 638 aa13.24□□□□□ -0.29
SMURF2-203ENST00000578386 ATF7IPQ6VMQ6 1270 aa13.24□□□□□ -0.29
SMURF2-203ENST00000578386 CENPQQ7L2Z9 268 aaPredicted RBP13.24□□□□□ -0.29
SMURF2-203ENST00000578386 NBPF4Q96M43 638 aa13.24□□□□□ -0.29
SMURF2-203ENST00000578386 LTN1O94822 1766 aa13.24□□□□□ -0.29
SMURF2-203ENST00000578386 GCP02774 474 aa13.23□□□□□ -0.29
SMURF2-203ENST00000578386 IGSF1Q8N6C5 1336 aa13.23□□□□□ -0.29
SMURF2-203ENST00000578386 LMOD3Q0VAK6 560 aa13.23□□□□□ -0.29
SMURF2-203ENST00000578386 MVPQ14764 893 aaKnown RBP13.23□□□□□ -0.29
SMURF2-203ENST00000578386 TRPM3Q9HCF6 1732 aaPredicted RBP13.23□□□□□ -0.29
SMURF2-203ENST00000578386 XIRP1Q702N8 1843 aaKnown RBP13.23□□□□□ -0.29
SMURF2-203ENST00000578386 NECTIN2Q92692 538 aa13.22□□□□□ -0.29
SMURF2-203ENST00000578386 MSH5O43196 834 aa13.22□□□□□ -0.29
SMURF2-203ENST00000578386 RTF1Q92541 710 aaKnown RBP13.22□□□□□ -0.29
SMURF2-203ENST00000578386 BCL11AQ9H165 835 aa13.22□□□□□ -0.29
SMURF2-203ENST00000578386 NFAT5O94916 1531 aa13.22□□□□□ -0.29
SMURF2-203ENST00000578386 PDE4AP27815 886 aa13.22□□□□□ -0.29
SMURF2-203ENST00000578386 AXIN2Q9Y2T1 843 aa13.22□□□□□ -0.29
SMURF2-203ENST00000578386 C1orf167Q5SNV9 1468 aa13.21□□□□□ -0.29
SMURF2-203ENST00000578386 CALD1Q05682 793 aaKnown RBP13.21□□□□□ -0.29
SMURF2-203ENST00000578386 C1orf115Q9H7X2 142 aa13.21□□□□□ -0.29
SMURF2-203ENST00000578386 ARHGEF10O15013 1369 aa13.21□□□□□ -0.3
SMURF2-203ENST00000578386 ZNF335Q9H4Z2 1342 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms