RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 CCDC173Q0VFZ6 552 aa14.49□□□□□ -0.09
ERBB2-206ENST00000578373 TBC1D9Q6ZT07 1266 aa14.49□□□□□ -0.09
ERBB2-206ENST00000578373 HOMER1Q86YM7 354 aa14.49□□□□□ -0.09
ERBB2-206ENST00000578373 NINLQ9Y2I6 1382 aa14.49□□□□□ -0.09
ERBB2-206ENST00000578373 CLSTN1O94985 981 aa14.48□□□□□ -0.09
ERBB2-206ENST00000578373 PARD3Q8TEW0 1356 aa14.48□□□□□ -0.09
ERBB2-206ENST00000578373 PDE4CQ08493 712 aa14.48□□□□□ -0.09
ERBB2-206ENST00000578373 ESCO1Q5FWF5 840 aa14.48□□□□□ -0.09
ERBB2-206ENST00000578373 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.48□□□□□ -0.09
ERBB2-206ENST00000578373 CCDC61Q9Y6R9 512 aa14.48□□□□□ -0.09
ERBB2-206ENST00000578373 USHBP1Q8N6Y0 703 aa14.47□□□□□ -0.09
ERBB2-206ENST00000578373 SRCIN1Q9C0H9 1055 aa14.47□□□□□ -0.09
ERBB2-206ENST00000578373 CCDC39Q9UFE4 941 aa14.47□□□□□ -0.09
ERBB2-206ENST00000578373 FAM177BA6PVY3 158 aa14.47□□□□□ -0.09
ERBB2-206ENST00000578373 MYL6BP14649 208 aa14.47□□□□□ -0.09
ERBB2-206ENST00000578373 CCDC73Q6ZRK6 1079 aa14.46□□□□□ -0.09
ERBB2-206ENST00000578373 ZNF771Q7L3S4 317 aaPredicted RBP14.46□□□□□ -0.1
ERBB2-206ENST00000578373 CCT4P50991 539 aaKnown RBP14.45□□□□□ -0.1
ERBB2-206ENST00000578373 RPAP2Q8IXW5 612 aaPredicted RBP14.45□□□□□ -0.1
ERBB2-206ENST00000578373 ZNF530Q6P9A1 599 aaPredicted RBP14.45□□□□□ -0.1
ERBB2-206ENST00000578373 NOS1P29475 1434 aa14.45□□□□□ -0.1
ERBB2-206ENST00000578373 GRIN2AQ12879 1464 aa14.45□□□□□ -0.1
ERBB2-206ENST00000578373 UGGT2Q9NYU1 1516 aa14.45□□□□□ -0.1
ERBB2-206ENST00000578373 C16orf71Q8IYS4 520 aaPredicted RBP14.45□□□□□ -0.1
ERBB2-206ENST00000578373 CIZ1Q9ULV3 898 aaPredicted RBP14.45□□□□□ -0.1
ERBB2-206ENST00000578373 EVA1CP58658 441 aa14.45□□□□□ -0.1
ERBB2-206ENST00000578373 JAKMIP1Q96N16 626 aaKnown RBP14.45□□□□□ -0.1
ERBB2-206ENST00000578373 RBM27Q9P2N5 1060 aaKnown RBP14.45□□□□□ -0.1
ERBB2-206ENST00000578373 XRCC6P12956 609 aaKnown RBP eCLIP14.44□□□□□ -0.1
ERBB2-206ENST00000578373 TPD52L1Q16890 204 aaPredicted RBP14.44□□□□□ -0.1
ERBB2-206ENST00000578373 NFXL1Q6ZNB6 911 aa14.44□□□□□ -0.1
ERBB2-206ENST00000578373 CWC22Q9HCG8 908 aaKnown RBP14.44□□□□□ -0.1
ERBB2-206ENST00000578373 KRT24Q2M2I5 525 aa14.44□□□□□ -0.1
ERBB2-206ENST00000578373 LARP1BQ659C4 914 aaKnown RBP14.44□□□□□ -0.1
ERBB2-206ENST00000578373 ZRANB1Q9UGI0 708 aa14.44□□□□□ -0.1
ERBB2-206ENST00000578373 ATAD2Q6PL18 1390 aa14.43□□□□□ -0.1
ERBB2-206ENST00000578373 CPLX2Q6PUV4 134 aaKnown RBP14.43□□□□□ -0.1
ERBB2-206ENST00000578373 CCDC85AQ96PX6 553 aaPredicted RBP14.43□□□□□ -0.1
ERBB2-206ENST00000578373 MBIPQ9NS73 344 aa14.43□□□□□ -0.1
ERBB2-206ENST00000578373 CUL7Q14999 1698 aa14.43□□□□□ -0.1
ERBB2-206ENST00000578373 PPFIA3O75145 1194 aa14.43□□□□□ -0.1
ERBB2-206ENST00000578373 ANXA1P04083 346 aa14.43□□□□□ -0.1
ERBB2-206ENST00000578373 MCM2P49736 904 aa14.43□□□□□ -0.1
ERBB2-206ENST00000578373 TRDNQ13061 729 aa14.43□□□□□ -0.1
ERBB2-206ENST00000578373 AACSQ86V21 672 aa14.43□□□□□ -0.1
ERBB2-206ENST00000578373 CCDC34Q96HJ3 373 aa14.43□□□□□ -0.1
ERBB2-206ENST00000578373 CYP46A1Q9Y6A2 500 aa14.42□□□□□ -0.1
ERBB2-206ENST00000578373 TSPYL6Q8N831 410 aa14.42□□□□□ -0.1
ERBB2-206ENST00000578373 DDX11Q96FC9 970 aa14.42□□□□□ -0.1
ERBB2-206ENST00000578373 SCAF11Q99590 1463 aaKnown RBP14.42□□□□□ -0.1
ERBB2-206ENST00000578373 FYB1O15117 783 aa14.42□□□□□ -0.1
ERBB2-206ENST00000578373 CAMK4Q16566 473 aa14.42□□□□□ -0.1
ERBB2-206ENST00000578373 SYNE3Q6ZMZ3 975 aa14.42□□□□□ -0.1
ERBB2-206ENST00000578373 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
ERBB2-206ENST00000578373 TNNT3P45378 269 aaPredicted RBP14.42□□□□□ -0.1
ERBB2-206ENST00000578373 AKAP17AQ02040 695 aaKnown RBP14.42□□□□□ -0.1
ERBB2-206ENST00000578373 RALYLQ86SE5 291 aaKnown RBP14.42□□□□□ -0.1
ERBB2-206ENST00000578373 NUP153P49790 1475 aaKnown RBP14.41□□□□□ -0.1
ERBB2-206ENST00000578373 CCDC83Q8IWF9 413 aa14.41□□□□□ -0.1
ERBB2-206ENST00000578373 WDR33Q9C0J8 1336 aaKnown RBP14.41□□□□□ -0.1
ERBB2-206ENST00000578373 PRAG1Q86YV5 1406 aa14.41□□□□□ -0.1
ERBB2-206ENST00000578373 MX1P20591 662 aa14.41□□□□□ -0.1
ERBB2-206ENST00000578373 MTMR7Q9Y216 660 aa14.41□□□□□ -0.1
ERBB2-206ENST00000578373 CASTP20810 708 aaKnown RBP14.4□□□□□ -0.1
ERBB2-206ENST00000578373 TRIM29Q14134 588 aa14.4□□□□□ -0.1
ERBB2-206ENST00000578373 C14orf93Q9H972 538 aaKnown RBP14.4□□□□□ -0.1
ERBB2-206ENST00000578373 LRRFIP2Q9Y608 721 aaKnown RBP14.4□□□□□ -0.1
ERBB2-206ENST00000578373 RALGAPBQ86X10 1494 aa14.4□□□□□ -0.1
ERBB2-206ENST00000578373 UQCRHLA0A096LP55 91 aa14.4□□□□□ -0.1
ERBB2-206ENST00000578373 UQCRHP07919 91 aa14.4□□□□□ -0.1
ERBB2-206ENST00000578373 MEIS3Q99687 375 aa14.4□□□□□ -0.1
ERBB2-206ENST00000578373 SPG7Q9UQ90 795 aa14.4□□□□□ -0.1
ERBB2-206ENST00000578373 ALDH1L2Q3SY69 923 aa14.4□□□□□ -0.1
ERBB2-206ENST00000578373 ZSCAN30Q86W11 494 aa14.4□□□□□ -0.1
ERBB2-206ENST00000578373 C8orf58Q8NAV2 365 aa14.4□□□□□ -0.1
ERBB2-206ENST00000578373 RPGRIP1LQ68CZ1 1315 aa14.4□□□□□ -0.1
ERBB2-206ENST00000578373 PSMA5P28066 241 aa14.4□□□□□ -0.1
ERBB2-206ENST00000578373 BAG4O95429 457 aaKnown RBP14.39□□□□□ -0.11
ERBB2-206ENST00000578373 PRKCSHP14314 528 aaPredicted RBP14.39□□□□□ -0.11
ERBB2-206ENST00000578373 TPM3P06753 285 aa14.39□□□□□ -0.11
ERBB2-206ENST00000578373 BMP2KLQ5H9B9 411 aa14.39□□□□□ -0.11
ERBB2-206ENST00000578373 ZC3H6P61129 1189 aaKnown RBP14.39□□□□□ -0.11
ERBB2-206ENST00000578373 TAF7Q15545 349 aaPredicted RBP14.39□□□□□ -0.11
ERBB2-206ENST00000578373 AEBP1Q8IUX7 1158 aa14.39□□□□□ -0.11
ERBB2-206ENST00000578373 PRPF40BQ6NWY9 871 aaKnown RBP14.38□□□□□ -0.11
ERBB2-206ENST00000578373 DTNBO60941 627 aa14.38□□□□□ -0.11
ERBB2-206ENST00000578373 FILIP1Q7Z7B0 1213 aa14.38□□□□□ -0.11
ERBB2-206ENST00000578373 KINO60870 393 aaKnown RBP14.38□□□□□ -0.11
ERBB2-206ENST00000578373 PLEKHO1Q53GL0 409 aaPredicted RBP14.38□□□□□ -0.11
ERBB2-206ENST00000578373 TTLL5Q6EMB2 1281 aa14.38□□□□□ -0.11
ERBB2-206ENST00000578373 PDILTQ8N807 584 aa14.38□□□□□ -0.11
ERBB2-206ENST00000578373 CHMP4CQ96CF2 233 aa14.38□□□□□ -0.11
ERBB2-206ENST00000578373 PHACTR3Q96KR7 559 aa14.38□□□□□ -0.11
ERBB2-206ENST00000578373 BOLA2Q9H3K6 86 aa14.38□□□□□ -0.11
ERBB2-206ENST00000578373 PDRG1Q9NUG6 133 aa14.38□□□□□ -0.11
ERBB2-206ENST00000578373 ATP10BO94823 1461 aa14.38□□□□□ -0.11
ERBB2-206ENST00000578373 HSP90AB2PQ58FF8 381 aa14.37□□□□□ -0.11
ERBB2-206ENST00000578373 KIF21AQ7Z4S6 1674 aa14.37□□□□□ -0.11
ERBB2-206ENST00000578373 BLOC1S2Q6QNY1 142 aa14.37□□□□□ -0.11
ERBB2-206ENST00000578373 TNMDQ9H2S6 317 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms