RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 TBC1D32Q96NH3 1257 aa13.08□□□□□ -0.32
RNF43-203ENST00000577716 GOLGA6L1Q8N7Z2 621 aa13.08□□□□□ -0.32
RNF43-203ENST00000577716 PCDHB15Q9Y5E8 787 aa13.08□□□□□ -0.32
RNF43-203ENST00000577716 SAMD9Q5K651 1589 aa13.07□□□□□ -0.32
RNF43-203ENST00000577716 RALYLQ86SE5 291 aaKnown RBP13.07□□□□□ -0.32
RNF43-203ENST00000577716 PZPP20742 1482 aa13.07□□□□□ -0.32
RNF43-203ENST00000577716 MAP4K4O95819 1239 aaPredicted RBP13.07□□□□□ -0.32
RNF43-203ENST00000577716 RBM10P98175 930 aaKnown RBP13.07□□□□□ -0.32
RNF43-203ENST00000577716 WAPLQ7Z5K2 1190 aa13.07□□□□□ -0.32
RNF43-203ENST00000577716 WASHC4Q2M389 1173 aa13.06□□□□□ -0.32
RNF43-203ENST00000577716 ZNF771Q7L3S4 317 aaPredicted RBP13.06□□□□□ -0.32
RNF43-203ENST00000577716 TESK2Q96S53 571 aa13.06□□□□□ -0.32
RNF43-203ENST00000577716 CD109Q6YHK3 1445 aa13.06□□□□□ -0.32
RNF43-203ENST00000577716 DHX29Q7Z478 1369 aaKnown RBP13.06□□□□□ -0.32
RNF43-203ENST00000577716 SRGAP3O43295 1099 aa13.06□□□□□ -0.32
RNF43-203ENST00000577716 MTERF4Q7Z6M4 381 aaKnown RBP13.06□□□□□ -0.32
RNF43-203ENST00000577716 CYP46A1Q9Y6A2 500 aa13.06□□□□□ -0.32
RNF43-203ENST00000577716 SYCP2Q9BX26 1530 aa13.06□□□□□ -0.32
RNF43-203ENST00000577716 SMARCA5O60264 1052 aaPredicted RBP13.06□□□□□ -0.32
RNF43-203ENST00000577716 MCM10Q7L590 875 aa13.06□□□□□ -0.32
RNF43-203ENST00000577716 NUDT16Q96DE0 195 aaKnown RBP13.06□□□□□ -0.32
RNF43-203ENST00000577716 UPF3BQ9BZI7 483 aaKnown RBP13.06□□□□□ -0.32
RNF43-203ENST00000577716 BCL11BQ9C0K0 894 aaPredicted RBP13.06□□□□□ -0.32
RNF43-203ENST00000577716 MIS18AQ9NYP9 233 aa13.06□□□□□ -0.32
RNF43-203ENST00000577716 TPM1P09493 284 aa13.06□□□□□ -0.32
RNF43-203ENST00000577716 ITSN2Q9NZM3 1697 aa13.05□□□□□ -0.32
RNF43-203ENST00000577716 C8orf34Q49A92 452 aa13.05□□□□□ -0.32
RNF43-203ENST00000577716 PLEKHO1Q53GL0 409 aaPredicted RBP13.05□□□□□ -0.32
RNF43-203ENST00000577716 TNPO1Q92973 898 aaKnown RBP13.05□□□□□ -0.32
RNF43-203ENST00000577716 EMILIN1Q9Y6C2 1016 aa13.05□□□□□ -0.32
RNF43-203ENST00000577716 HIP1O00291 1037 aa13.05□□□□□ -0.32
RNF43-203ENST00000577716 ERC1Q8IUD2 1116 aa13.05□□□□□ -0.32
RNF43-203ENST00000577716 FANCAO15360 1455 aa13.05□□□□□ -0.32
RNF43-203ENST00000577716 PRAG1Q86YV5 1406 aa13.05□□□□□ -0.32
RNF43-203ENST00000577716 HMGN5P82970 282 aaKnown RBP13.05□□□□□ -0.32
RNF43-203ENST00000577716 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
RNF43-203ENST00000577716 NFXL1Q6ZNB6 911 aa13.05□□□□□ -0.32
RNF43-203ENST00000577716 SLC26A8Q96RN1 970 aa13.05□□□□□ -0.32
RNF43-203ENST00000577716 DNAJC2Q99543 621 aaKnown RBP13.05□□□□□ -0.32
RNF43-203ENST00000577716 SSFA2P28290 1259 aa13.04□□□□□ -0.32
RNF43-203ENST00000577716 EVA1CP58658 441 aa13.04□□□□□ -0.32
RNF43-203ENST00000577716 SPC24Q8NBT2 197 aa13.04□□□□□ -0.32
RNF43-203ENST00000577716 PLCH2O75038 1416 aa13.04□□□□□ -0.32
RNF43-203ENST00000577716 PER1O15534 1290 aaPredicted RBP13.04□□□□□ -0.32
RNF43-203ENST00000577716 KINO60870 393 aaKnown RBP13.04□□□□□ -0.32
RNF43-203ENST00000577716 IDI1Q13907 227 aa13.04□□□□□ -0.32
RNF43-203ENST00000577716 ZSCAN30Q86W11 494 aa13.04□□□□□ -0.32
RNF43-203ENST00000577716 NME9Q86XW9 330 aa13.04□□□□□ -0.32
RNF43-203ENST00000577716 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
RNF43-203ENST00000577716 FAM135AQ9P2D6 1515 aa13.03□□□□□ -0.32
RNF43-203ENST00000577716 SYCE3A1L190 88 aa13.03□□□□□ -0.32
RNF43-203ENST00000577716 BMP2KLQ5H9B9 411 aa13.03□□□□□ -0.32
RNF43-203ENST00000577716 CLSTN1O94985 981 aa13.03□□□□□ -0.32
RNF43-203ENST00000577716 KRT85P78386 507 aa13.03□□□□□ -0.32
RNF43-203ENST00000577716 ZNF530Q6P9A1 599 aaPredicted RBP13.03□□□□□ -0.32
RNF43-203ENST00000577716 CCDC192P0DO97 292 aa13.03□□□□□ -0.32
RNF43-203ENST00000577716 CEBPZQ03701 1054 aaKnown RBP13.03□□□□□ -0.32
RNF43-203ENST00000577716 LARP1BQ659C4 914 aaKnown RBP13.03□□□□□ -0.32
RNF43-203ENST00000577716 CWC27Q6UX04 472 aaKnown RBP13.03□□□□□ -0.32
RNF43-203ENST00000577716 SIL1Q9H173 461 aa13.03□□□□□ -0.32
RNF43-203ENST00000577716 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
RNF43-203ENST00000577716 NOS1P29475 1434 aa13.02□□□□□ -0.32
RNF43-203ENST00000577716 DNMT1P26358 1616 aaKnown RBP13.02□□□□□ -0.32
RNF43-203ENST00000577716 C14orf93Q9H972 538 aaKnown RBP13.02□□□□□ -0.32
RNF43-203ENST00000577716 TBC1D9Q6ZT07 1266 aa13.02□□□□□ -0.32
RNF43-203ENST00000577716 NOC3LQ8WTT2 800 aaKnown RBP13.02□□□□□ -0.32
RNF43-203ENST00000577716 FMNL2Q96PY5 1086 aa13.02□□□□□ -0.32
RNF43-203ENST00000577716 NAT10Q9H0A0 1025 aaKnown RBP13.02□□□□□ -0.32
RNF43-203ENST00000577716 HOOK1Q9UJC3 728 aaKnown RBP13.02□□□□□ -0.32
RNF43-203ENST00000577716 TRAPPC8Q9Y2L5 1435 aa13.02□□□□□ -0.33
RNF43-203ENST00000577716 STK3Q13188 491 aa13.02□□□□□ -0.33
RNF43-203ENST00000577716 AEBP1Q8IUX7 1158 aa13.02□□□□□ -0.33
RNF43-203ENST00000577716 SAFBQ15424 915 aaKnown RBP eCLIP13.01□□□□□ -0.33
RNF43-203ENST00000577716 JAKMIP1Q96N16 626 aaKnown RBP13.01□□□□□ -0.33
RNF43-203ENST00000577716 F6X3S4 739 aa13.01□□□□□ -0.33
RNF43-203ENST00000577716 MX1P20591 662 aa13.01□□□□□ -0.33
RNF43-203ENST00000577716 TEX14Q8IWB6 1497 aa13.01□□□□□ -0.33
RNF43-203ENST00000577716 MARCH6O60337 910 aa13.01□□□□□ -0.33
RNF43-203ENST00000577716 ESCO1Q5FWF5 840 aa13.01□□□□□ -0.33
RNF43-203ENST00000577716 BLOC1S2Q6QNY1 142 aa13.01□□□□□ -0.33
RNF43-203ENST00000577716 NUTM1Q86Y26 1132 aa13.01□□□□□ -0.33
RNF43-203ENST00000577716 NUP160Q12769 1436 aa13.01□□□□□ -0.33
RNF43-203ENST00000577716 MNS1Q8NEH6 495 aa13□□□□□ -0.33
RNF43-203ENST00000577716 FBXO31Q5XUX0 539 aaPredicted RBP13□□□□□ -0.33
RNF43-203ENST00000577716 TNNQ9UQP3 1299 aa13□□□□□ -0.33
RNF43-203ENST00000577716 SYTL4Q96C24 671 aaPredicted RBP13□□□□□ -0.33
RNF43-203ENST00000577716 TNMDQ9H2S6 317 aa13□□□□□ -0.33
RNF43-203ENST00000577716 A0A0U1RQG5 324 aaPredicted RBP12.99□□□□□ -0.33
RNF43-203ENST00000577716 GPS2Q13227 327 aa12.99□□□□□ -0.33
RNF43-203ENST00000577716 HDAC1Q13547 482 aaPredicted RBP12.99□□□□□ -0.33
RNF43-203ENST00000577716 AACSQ86V21 672 aa12.99□□□□□ -0.33
RNF43-203ENST00000577716 PBRM1Q86U86 1689 aa12.99□□□□□ -0.33
RNF43-203ENST00000577716 ANKRD1Q15327 319 aa12.99□□□□□ -0.33
RNF43-203ENST00000577716 ASXL1Q8IXJ9 1541 aa12.99□□□□□ -0.33
RNF43-203ENST00000577716 ANKRD20A12PQ8NF67 263 aa12.99□□□□□ -0.33
RNF43-203ENST00000577716 ERICH2A1L162 156 aa12.99□□□□□ -0.33
RNF43-203ENST00000577716 IPO7O95373 1038 aaKnown RBP12.99□□□□□ -0.33
RNF43-203ENST00000577716 RLBP1P12271 317 aa12.99□□□□□ -0.33
RNF43-203ENST00000577716 PDRG1Q9NUG6 133 aa12.99□□□□□ -0.33
RNF43-203ENST00000577716 NSD2O96028 1365 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms