RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SRGAP3O43295 1099 aa21.49■■□□□ 1.03
ATPAF1-214ENST00000576409 MCM2P49736 904 aa21.49■■□□□ 1.03
ATPAF1-214ENST00000576409 TPD52L1Q16890 204 aaPredicted RBP21.49■■□□□ 1.03
ATPAF1-214ENST00000576409 CCDC30Q5VVM6 783 aa21.49■■□□□ 1.03
ATPAF1-214ENST00000576409 CAMK4Q16566 473 aa21.48■■□□□ 1.03
ATPAF1-214ENST00000576409 CLCN1P35523 988 aa21.48■■□□□ 1.03
ATPAF1-214ENST00000576409 RPAP2Q8IXW5 612 aaPredicted RBP21.48■■□□□ 1.03
ATPAF1-214ENST00000576409 ZNF830Q96NB3 372 aaPredicted RBP21.48■■□□□ 1.03
ATPAF1-214ENST00000576409 CPLX1O14810 134 aa21.47■■□□□ 1.03
ATPAF1-214ENST00000576409 PRAG1Q86YV5 1406 aa21.47■■□□□ 1.03
ATPAF1-214ENST00000576409 WDR33Q9C0J8 1336 aaKnown RBP21.47■■□□□ 1.03
ATPAF1-214ENST00000576409 MAP7D2Q96T17 732 aa21.47■■□□□ 1.03
ATPAF1-214ENST00000576409 APPP05067 770 aa21.47■■□□□ 1.03
ATPAF1-214ENST00000576409 CCDC73Q6ZRK6 1079 aa21.46■■□□□ 1.03
ATPAF1-214ENST00000576409 LARP1BQ659C4 914 aaKnown RBP21.45■■□□□ 1.02
ATPAF1-214ENST00000576409 RIC3Q7Z5B4 369 aa21.45■■□□□ 1.02
ATPAF1-214ENST00000576409 STK11IPQ8N1F8 1099 aa21.45■■□□□ 1.02
ATPAF1-214ENST00000576409 TSPYL6Q8N831 410 aa21.45■■□□□ 1.02
ATPAF1-214ENST00000576409 JAKMIP1Q96N16 626 aaKnown RBP21.45■■□□□ 1.02
ATPAF1-214ENST00000576409 DNAJC2Q99543 621 aaKnown RBP21.45■■□□□ 1.02
ATPAF1-214ENST00000576409 DTNBO60941 627 aa21.44■■□□□ 1.02
ATPAF1-214ENST00000576409 NUCB1Q02818 461 aa21.44■■□□□ 1.02
ATPAF1-214ENST00000576409 SLC26A8Q96RN1 970 aa21.44■■□□□ 1.02
ATPAF1-214ENST00000576409 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
ATPAF1-214ENST00000576409 RASSF8Q8NHQ8 419 aa21.44■■□□□ 1.02
ATPAF1-214ENST00000576409 UBE2Q2Q8WVN8 375 aa21.44■■□□□ 1.02
ATPAF1-214ENST00000576409 KRT24Q2M2I5 525 aa21.43■■□□□ 1.02
ATPAF1-214ENST00000576409 FILIP1Q7Z7B0 1213 aa21.43■■□□□ 1.02
ATPAF1-214ENST00000576409 CCDC83Q8IWF9 413 aa21.43■■□□□ 1.02
ATPAF1-214ENST00000576409 CBX1P83916 185 aa21.43■■□□□ 1.02
ATPAF1-214ENST00000576409 MBIPQ9NS73 344 aa21.43■■□□□ 1.02
ATPAF1-214ENST00000576409 HSP90AB4PQ58FF6 505 aa21.42■■□□□ 1.02
ATPAF1-214ENST00000576409 HDAC1Q13547 482 aaPredicted RBP21.42■■□□□ 1.02
ATPAF1-214ENST00000576409 IDI1Q13907 227 aa21.42■■□□□ 1.02
ATPAF1-214ENST00000576409 ALDH1L2Q3SY69 923 aa21.42■■□□□ 1.02
ATPAF1-214ENST00000576409 TEX14Q8IWB6 1497 aa21.42■■□□□ 1.02
ATPAF1-214ENST00000576409 SCAF11Q99590 1463 aaKnown RBP21.42■■□□□ 1.02
ATPAF1-214ENST00000576409 CCT4P50991 539 aaKnown RBP21.42■■□□□ 1.02
ATPAF1-214ENST00000576409 ZGPATQ8N5A5 531 aaKnown RBP21.42■■□□□ 1.02
ATPAF1-214ENST00000576409 PZPP20742 1482 aa21.42■■□□□ 1.02
ATPAF1-214ENST00000576409 CUL7Q14999 1698 aa21.42■■□□□ 1.02
ATPAF1-214ENST00000576409 HMGN5P82970 282 aaKnown RBP21.41■■□□□ 1.02
ATPAF1-214ENST00000576409 MRC2Q9UBG0 1479 aa21.41■■□□□ 1.02
ATPAF1-214ENST00000576409 ATP2B1P20020 1258 aa21.41■■□□□ 1.02
ATPAF1-214ENST00000576409 ABTB2Q8N961 1025 aa21.41■■□□□ 1.02
ATPAF1-214ENST00000576409 CYP46A1Q9Y6A2 500 aa21.41■■□□□ 1.02
ATPAF1-214ENST00000576409 SPATA31E1Q6ZUB1 1445 aa21.41■■□□□ 1.02
ATPAF1-214ENST00000576409 PPFIA3O75145 1194 aa21.41■■□□□ 1.02
ATPAF1-214ENST00000576409 KLHL40Q2TBA0 621 aa21.41■■□□□ 1.02
ATPAF1-214ENST00000576409 ZSCAN23Q3MJ62 389 aa21.41■■□□□ 1.02
ATPAF1-214ENST00000576409 MX1P20591 662 aa21.4■■□□□ 1.02
ATPAF1-214ENST00000576409 CASTP20810 708 aaKnown RBP21.4■■□□□ 1.02
ATPAF1-214ENST00000576409 PSME1Q06323 249 aa21.4■■□□□ 1.02
ATPAF1-214ENST00000576409 DDX11Q96FC9 970 aa21.4■■□□□ 1.02
ATPAF1-214ENST00000576409 MEIS3Q99687 375 aa21.4■■□□□ 1.02
ATPAF1-214ENST00000576409 SRCIN1Q9C0H9 1055 aa21.4■■□□□ 1.02
ATPAF1-214ENST00000576409 IFT140Q96RY7 1462 aa21.4■■□□□ 1.02
ATPAF1-214ENST00000576409 SDSP20132 328 aa21.4■■□□□ 1.02
ATPAF1-214ENST00000576409 PRIM1P49642 420 aaKnown RBP21.4■■□□□ 1.02
ATPAF1-214ENST00000576409 TNMDQ9H2S6 317 aa21.4■■□□□ 1.02
ATPAF1-214ENST00000576409 NUP153P49790 1475 aaKnown RBP21.39■■□□□ 1.02
ATPAF1-214ENST00000576409 CCDC192P0DO97 292 aa21.39■■□□□ 1.02
ATPAF1-214ENST00000576409 FAM69CQ0P6D2 419 aa21.39■■□□□ 1.02
ATPAF1-214ENST00000576409 C8orf58Q8NAV2 365 aa21.39■■□□□ 1.02
ATPAF1-214ENST00000576409 SPG7Q9UQ90 795 aa21.39■■□□□ 1.02
ATPAF1-214ENST00000576409 MAPK8IP2Q13387 824 aaPredicted RBP21.39■■□□□ 1.01
ATPAF1-214ENST00000576409 FYB1O15117 783 aa21.38■■□□□ 1.01
ATPAF1-214ENST00000576409 FBXO31Q5XUX0 539 aaPredicted RBP21.38■■□□□ 1.01
ATPAF1-214ENST00000576409 NOS1P29475 1434 aa21.38■■□□□ 1.01
ATPAF1-214ENST00000576409 WASHC4Q2M389 1173 aa21.38■■□□□ 1.01
ATPAF1-214ENST00000576409 DDX58O95786 925 aaKnown RBP21.37■■□□□ 1.01
ATPAF1-214ENST00000576409 MTERF4Q7Z6M4 381 aaKnown RBP21.37■■□□□ 1.01
ATPAF1-214ENST00000576409 CKAP2LQ8IYA6 745 aa21.37■■□□□ 1.01
ATPAF1-214ENST00000576409 TTC5Q8N0Z6 440 aa21.37■■□□□ 1.01
ATPAF1-214ENST00000576409 NUDT16Q96DE0 195 aaKnown RBP21.37■■□□□ 1.01
ATPAF1-214ENST00000576409 HCLS1P14317 486 aaPredicted RBP21.37■■□□□ 1.01
ATPAF1-214ENST00000576409 KRT85P78386 507 aa21.37■■□□□ 1.01
ATPAF1-214ENST00000576409 ZHX1Q9UKY1 873 aaPredicted RBP21.37■■□□□ 1.01
ATPAF1-214ENST00000576409 TFIP11Q9UBB9 837 aaKnown RBP21.36■■□□□ 1.01
ATPAF1-214ENST00000576409 ZRANB1Q9UGI0 708 aa21.36■■□□□ 1.01
ATPAF1-214ENST00000576409 RTEL1-TNFRSF6BF6WH68 1400 aa21.36■■□□□ 1.01
ATPAF1-214ENST00000576409 SMC2O95347 1197 aa21.36■■□□□ 1.01
ATPAF1-214ENST00000576409 PRPF40BQ6NWY9 871 aaKnown RBP21.36■■□□□ 1.01
ATPAF1-214ENST00000576409 FAM177A1Q8N128 213 aaPredicted RBP21.36■■□□□ 1.01
ATPAF1-214ENST00000576409 LRRFIP2Q9Y608 721 aaKnown RBP21.36■■□□□ 1.01
ATPAF1-214ENST00000576409 ZBTB40Q9NUA8 1239 aa21.36■■□□□ 1.01
ATPAF1-214ENST00000576409 PDRG1Q9NUG6 133 aa21.36■■□□□ 1.01
ATPAF1-214ENST00000576409 KINO60870 393 aaKnown RBP21.35■■□□□ 1.01
ATPAF1-214ENST00000576409 AACSQ86V21 672 aa21.35■■□□□ 1.01
ATPAF1-214ENST00000576409 PHACTR3Q96KR7 559 aa21.35■■□□□ 1.01
ATPAF1-214ENST00000576409 CCDC61Q9Y6R9 512 aa21.35■■□□□ 1.01
ATPAF1-214ENST00000576409 SYNE3Q6ZMZ3 975 aa21.35■■□□□ 1.01
ATPAF1-214ENST00000576409 OTUD7AQ8TE49 926 aaPredicted RBP21.35■■□□□ 1.01
ATPAF1-214ENST00000576409 PSMA5P28066 241 aa21.34■■□□□ 1.01
ATPAF1-214ENST00000576409 TTC22Q5TAA0 569 aa21.34■■□□□ 1.01
ATPAF1-214ENST00000576409 SMC5Q8IY18 1101 aa21.34■■□□□ 1.01
ATPAF1-214ENST00000576409 PDILTQ8N807 584 aa21.34■■□□□ 1.01
ATPAF1-214ENST00000576409 TMX3Q96JJ7 454 aa21.34■■□□□ 1.01
ATPAF1-214ENST00000576409 MNS1Q8NEH6 495 aa21.34■■□□□ 1.01
ATPAF1-214ENST00000576409 PDCP20941 246 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms