RNA–Protein interactions for RNA: ENST00000574744.1

TOM1L1-219, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-219ENST00000574744 CCDC146Q8IYE0 955 aa12.23□□□□□ -0.45
TOM1L1-219ENST00000574744 MST1RQ04912 1400 aa12.22□□□□□ -0.45
TOM1L1-219ENST00000574744 FXR2P51116 673 aaKnown RBP eCLIP12.22□□□□□ -0.45
TOM1L1-219ENST00000574744 DUSP27Q5VZP5 1158 aa12.22□□□□□ -0.45
TOM1L1-219ENST00000574744 PROSER2Q86WR7 435 aaPredicted RBP12.22□□□□□ -0.45
TOM1L1-219ENST00000574744 TCP11L2Q8N4U5 519 aa12.22□□□□□ -0.45
TOM1L1-219ENST00000574744 PMFBP1Q8TBY8 1022 aa12.22□□□□□ -0.45
TOM1L1-219ENST00000574744 PLEKHF1Q96S99 279 aa12.22□□□□□ -0.45
TOM1L1-219ENST00000574744 C19orf44Q9H6X5 657 aa12.22□□□□□ -0.45
TOM1L1-219ENST00000574744 RCAN3Q9UKA8 241 aa12.22□□□□□ -0.45
TOM1L1-219ENST00000574744 MARF1Q9Y4F3 1742 aaKnown RBP12.22□□□□□ -0.45
TOM1L1-219ENST00000574744 STRCP1A6NGW2 1772 aa12.21□□□□□ -0.45
TOM1L1-219ENST00000574744 STRCQ7RTU9 1775 aa12.21□□□□□ -0.45
TOM1L1-219ENST00000574744 NUTM2FA1L443 756 aa12.21□□□□□ -0.45
TOM1L1-219ENST00000574744 IL13P35225 146 aa12.21□□□□□ -0.45
TOM1L1-219ENST00000574744 WWC1Q8IX03 1113 aa12.21□□□□□ -0.45
TOM1L1-219ENST00000574744 PELP1Q8IZL8 1130 aaKnown RBP12.21□□□□□ -0.45
TOM1L1-219ENST00000574744 CDCA7LQ96GN5 454 aa12.21□□□□□ -0.45
TOM1L1-219ENST00000574744 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
TOM1L1-219ENST00000574744 SALL2Q9Y467 1007 aaPredicted RBP12.21□□□□□ -0.45
TOM1L1-219ENST00000574744 SBNO1A3KN83 1393 aa12.2□□□□□ -0.46
TOM1L1-219ENST00000574744 MAPK8IP3Q9UPT6 1336 aa12.2□□□□□ -0.46
TOM1L1-219ENST00000574744 U2SURPO15042 1029 aaKnown RBP12.2□□□□□ -0.46
TOM1L1-219ENST00000574744 ZRANB1Q9UGI0 708 aa12.2□□□□□ -0.46
TOM1L1-219ENST00000574744 EMILIN1Q9Y6C2 1016 aa12.2□□□□□ -0.46
TOM1L1-219ENST00000574744 RGPD1P0DJD0 1748 aa12.2□□□□□ -0.46
TOM1L1-219ENST00000574744 RTL1A6NKG5 1358 aa12.19□□□□□ -0.46
TOM1L1-219ENST00000574744 FLT4P35916 1363 aa12.19□□□□□ -0.46
TOM1L1-219ENST00000574744 PHRF1Q9P1Y6 1649 aaKnown RBP12.19□□□□□ -0.46
TOM1L1-219ENST00000574744 IL16Q14005 1332 aa12.19□□□□□ -0.46
TOM1L1-219ENST00000574744 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
TOM1L1-219ENST00000574744 RSPH6AQ9H0K4 717 aa12.19□□□□□ -0.46
TOM1L1-219ENST00000574744 PEAK1Q9H792 1746 aa12.19□□□□□ -0.46
TOM1L1-219ENST00000574744 C1orf167Q5SNV9 1468 aa12.19□□□□□ -0.46
TOM1L1-219ENST00000574744 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
TOM1L1-219ENST00000574744 NEFMP07197 916 aa12.18□□□□□ -0.46
TOM1L1-219ENST00000574744 RRP1P56182 461 aaKnown RBP12.18□□□□□ -0.46
TOM1L1-219ENST00000574744 C14orf37Q86TY3 774 aa12.18□□□□□ -0.46
TOM1L1-219ENST00000574744 TRPM3Q9HCF6 1732 aaPredicted RBP12.17□□□□□ -0.46
TOM1L1-219ENST00000574744 TMPOP42166 694 aaKnown RBP12.17□□□□□ -0.46
TOM1L1-219ENST00000574744 PPP4R2Q9NY27 417 aa12.17□□□□□ -0.46
TOM1L1-219ENST00000574744 ARHGEF10O15013 1369 aa12.17□□□□□ -0.46
TOM1L1-219ENST00000574744 CT47B1P0C2W7 299 aaPredicted RBP12.16□□□□□ -0.46
TOM1L1-219ENST00000574744 RRS1Q15050 365 aaKnown RBP12.16□□□□□ -0.46
TOM1L1-219ENST00000574744 ESCO1Q5FWF5 840 aa12.16□□□□□ -0.46
TOM1L1-219ENST00000574744 CADPS2Q86UW7 1296 aa12.16□□□□□ -0.46
TOM1L1-219ENST00000574744 MYH16Q9H6N6 1097 aa12.16□□□□□ -0.46
TOM1L1-219ENST00000574744 SLIT3O75094 1523 aa12.16□□□□□ -0.46
TOM1L1-219ENST00000574744 MAP3K19Q56UN5 1328 aa12.15□□□□□ -0.46
TOM1L1-219ENST00000574744 PPM1GO15355 546 aaPredicted RBP12.15□□□□□ -0.46
TOM1L1-219ENST00000574744 ATF3P18847 181 aa12.15□□□□□ -0.46
TOM1L1-219ENST00000574744 NUBP1P53384 320 aa12.15□□□□□ -0.46
TOM1L1-219ENST00000574744 NLRP6P59044 892 aa12.15□□□□□ -0.46
TOM1L1-219ENST00000574744 NFAT5O94916 1531 aa12.15□□□□□ -0.46
TOM1L1-219ENST00000574744 MSH6P52701 1360 aa12.15□□□□□ -0.46
TOM1L1-219ENST00000574744 XIRP1Q702N8 1843 aaKnown RBP12.14□□□□□ -0.47
TOM1L1-219ENST00000574744 SENP3-EIF4A1A0A087X0R7 540 aa12.14□□□□□ -0.47
TOM1L1-219ENST00000574744 PRKAR2BP31323 418 aa12.14□□□□□ -0.47
TOM1L1-219ENST00000574744 HSPA2P54652 639 aa12.14□□□□□ -0.47
TOM1L1-219ENST00000574744 CALD1Q05682 793 aaKnown RBP12.14□□□□□ -0.47
TOM1L1-219ENST00000574744 PSME1Q06323 249 aa12.14□□□□□ -0.47
TOM1L1-219ENST00000574744 LMOD3Q0VAK6 560 aa12.14□□□□□ -0.47
TOM1L1-219ENST00000574744 EIF4A2Q14240 407 aaKnown RBP12.14□□□□□ -0.47
TOM1L1-219ENST00000574744 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
TOM1L1-219ENST00000574744 ABTB2Q8N961 1025 aa12.14□□□□□ -0.47
TOM1L1-219ENST00000574744 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.14□□□□□ -0.47
TOM1L1-219ENST00000574744 KCNH5Q8NCM2 988 aa12.14□□□□□ -0.47
TOM1L1-219ENST00000574744 KDRP35968 1356 aa12.14□□□□□ -0.47
TOM1L1-219ENST00000574744 PRKAR2AP13861 404 aaKnown RBP12.13□□□□□ -0.47
TOM1L1-219ENST00000574744 FBLN1P23142 703 aa12.13□□□□□ -0.47
TOM1L1-219ENST00000574744 NFE2L2Q16236 605 aa12.13□□□□□ -0.47
TOM1L1-219ENST00000574744 ALS2Q96Q42 1657 aa12.13□□□□□ -0.47
TOM1L1-219ENST00000574744 USP19O94966 1318 aa12.12□□□□□ -0.47
TOM1L1-219ENST00000574744 TRIM35Q9UPQ4 493 aa12.12□□□□□ -0.47
TOM1L1-219ENST00000574744 LTN1O94822 1766 aa12.11□□□□□ -0.47
TOM1L1-219ENST00000574744 RIPK4P57078 832 aa12.11□□□□□ -0.47
TOM1L1-219ENST00000574744 RRP7AQ9Y3A4 280 aaKnown RBP12.11□□□□□ -0.47
TOM1L1-219ENST00000574744 ABCC6O95255 1503 aa12.11□□□□□ -0.47
TOM1L1-219ENST00000574744 IGSF1Q8N6C5 1336 aa12.11□□□□□ -0.47
TOM1L1-219ENST00000574744 PAK3O75914 559 aaPredicted RBP12.1□□□□□ -0.47
TOM1L1-219ENST00000574744 AMPHP49418 695 aa12.1□□□□□ -0.47
TOM1L1-219ENST00000574744 NEUROD2Q15784 382 aa12.1□□□□□ -0.47
TOM1L1-219ENST00000574744 HSP90AB2PQ58FF8 381 aa12.1□□□□□ -0.47
TOM1L1-219ENST00000574744 RBM33Q96EV2 1170 aaKnown RBP12.1□□□□□ -0.47
TOM1L1-219ENST00000574744 ORAI2Q96SN7 254 aa12.1□□□□□ -0.47
TOM1L1-219ENST00000574744 NPHP3Q7Z494 1330 aa12.1□□□□□ -0.47
TOM1L1-219ENST00000574744 HOXC9P31274 260 aa12.09□□□□□ -0.47
TOM1L1-219ENST00000574744 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
TOM1L1-219ENST00000574744 DLG5Q8TDM6 1919 aa12.09□□□□□ -0.47
TOM1L1-219ENST00000574744 MED1Q15648 1581 aaPredicted RBP12.09□□□□□ -0.47
TOM1L1-219ENST00000574744 FOXO3O43524 673 aa12.08□□□□□ -0.48
TOM1L1-219ENST00000574744 HMOX1P09601 288 aa12.08□□□□□ -0.48
TOM1L1-219ENST00000574744 IRX6P78412 446 aaPredicted RBP12.08□□□□□ -0.48
TOM1L1-219ENST00000574744 KRT28Q7Z3Y7 464 aa12.08□□□□□ -0.48
TOM1L1-219ENST00000574744 IP6K1Q92551 441 aa12.08□□□□□ -0.48
TOM1L1-219ENST00000574744 ZNF428Q96B54 188 aa12.08□□□□□ -0.48
TOM1L1-219ENST00000574744 NCAPD2Q15021 1401 aa12.07□□□□□ -0.48
TOM1L1-219ENST00000574744 SULT6B1Q6IMI4 303 aa12.07□□□□□ -0.48
TOM1L1-219ENST00000574744 PHACTR3Q96KR7 559 aa12.07□□□□□ -0.48
TOM1L1-219ENST00000574744 IFT57Q9NWB7 429 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms