RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
NUP88-207ENST00000573584 IFT57Q9NWB7 429 aa19.53■□□□□ 0.72
NUP88-207ENST00000573584 WAPLQ7Z5K2 1190 aa19.53■□□□□ 0.72
NUP88-207ENST00000573584 TNPO1Q92973 898 aaKnown RBP19.53■□□□□ 0.72
NUP88-207ENST00000573584 KIF2CQ99661 725 aa19.53■□□□□ 0.72
NUP88-207ENST00000573584 ALKQ9UM73 1620 aa19.53■□□□□ 0.72
NUP88-207ENST00000573584 MRE11P49959 708 aa19.52■□□□□ 0.72
NUP88-207ENST00000573584 MBIPQ9NS73 344 aa19.52■□□□□ 0.72
NUP88-207ENST00000573584 CIZ1Q9ULV3 898 aaPredicted RBP19.52■□□□□ 0.72
NUP88-207ENST00000573584 PIK3R4Q99570 1358 aa19.52■□□□□ 0.72
NUP88-207ENST00000573584 SIRT2Q8IXJ6 389 aa19.52■□□□□ 0.72
NUP88-207ENST00000573584 TBC1D9Q6ZT07 1266 aa19.52■□□□□ 0.71
NUP88-207ENST00000573584 EMILIN1Q9Y6C2 1016 aa19.52■□□□□ 0.71
NUP88-207ENST00000573584 PTCH1Q13635 1447 aa19.51■□□□□ 0.71
NUP88-207ENST00000573584 PREX1Q8TCU6 1659 aa19.51■□□□□ 0.71
NUP88-207ENST00000573584 HSP90AA1P07900 732 aaKnown RBP19.51■□□□□ 0.71
NUP88-207ENST00000573584 KIF20BQ96Q89 1820 aa19.51■□□□□ 0.71
NUP88-207ENST00000573584 ZNF853P0CG23 659 aa19.5■□□□□ 0.71
NUP88-207ENST00000573584 TWISTNBQ3B726 338 aaPredicted RBP19.5■□□□□ 0.71
NUP88-207ENST00000573584 ABCC4O15439 1325 aa19.5■□□□□ 0.71
NUP88-207ENST00000573584 IL13P35225 146 aa19.5■□□□□ 0.71
NUP88-207ENST00000573584 GBP4Q96PP9 640 aa19.49■□□□□ 0.71
NUP88-207ENST00000573584 PRKCSHP14314 528 aaPredicted RBP19.48■□□□□ 0.71
NUP88-207ENST00000573584 RAB3GAP1Q15042 981 aa19.48■□□□□ 0.71
NUP88-207ENST00000573584 CD2BP2O95400 341 aaKnown RBP19.48■□□□□ 0.71
NUP88-207ENST00000573584 GRPEL1Q9HAV7 217 aa19.48■□□□□ 0.71
NUP88-207ENST00000573584 ATP7BP35670 1465 aa19.48■□□□□ 0.71
NUP88-207ENST00000573584 C8orf58Q8NAV2 365 aa19.48■□□□□ 0.71
NUP88-207ENST00000573584 CFAP44Q96MT7 982 aa19.48■□□□□ 0.71
NUP88-207ENST00000573584 FOXD4L1Q9NU39 408 aa19.48■□□□□ 0.71
NUP88-207ENST00000573584 NME9Q86XW9 330 aa19.47■□□□□ 0.71
NUP88-207ENST00000573584 API5Q9BZZ5 524 aaKnown RBP19.47■□□□□ 0.71
NUP88-207ENST00000573584 K7ELQ4 463 aaPredicted RBP19.46■□□□□ 0.71
NUP88-207ENST00000573584 RBM42Q9BTD8 480 aaKnown RBP19.46■□□□□ 0.71
NUP88-207ENST00000573584 ISY1Q9ULR0 285 aaKnown RBP19.46■□□□□ 0.71
NUP88-207ENST00000573584 LMOD3Q0VAK6 560 aa19.46■□□□□ 0.71
NUP88-207ENST00000573584 RICTORQ6R327 1708 aa19.45■□□□□ 0.7
NUP88-207ENST00000573584 ZRANB1Q9UGI0 708 aa19.45■□□□□ 0.7
NUP88-207ENST00000573584 CDC45O75419 566 aa19.45■□□□□ 0.7
NUP88-207ENST00000573584 FAM83GA6ND36 823 aa19.44■□□□□ 0.7
NUP88-207ENST00000573584 SKOR2Q2VWA4 1001 aaPredicted RBP19.43■□□□□ 0.7
NUP88-207ENST00000573584 MAP2P11137 1827 aaKnown RBP19.43■□□□□ 0.7
NUP88-207ENST00000573584 EDC4Q6P2E9 1401 aaKnown RBP19.42■□□□□ 0.7
NUP88-207ENST00000573584 WASLO00401 505 aaPredicted RBP19.41■□□□□ 0.7
NUP88-207ENST00000573584 GSPT1P15170 499 aaKnown RBP19.41■□□□□ 0.7
NUP88-207ENST00000573584 PTMSP20962 102 aa19.41■□□□□ 0.7
NUP88-207ENST00000573584 DCTN1Q14203 1278 aa19.41■□□□□ 0.7
NUP88-207ENST00000573584 RRS1Q15050 365 aaKnown RBP19.41■□□□□ 0.7
NUP88-207ENST00000573584 CLCN1P35523 988 aa19.41■□□□□ 0.7
NUP88-207ENST00000573584 PLEKHM2Q8IWE5 1019 aa19.41■□□□□ 0.7
NUP88-207ENST00000573584 COG3Q96JB2 828 aa19.41■□□□□ 0.7
NUP88-207ENST00000573584 CPSF1Q10570 1443 aaKnown RBP19.41■□□□□ 0.7
NUP88-207ENST00000573584 DCTPP1Q9H773 170 aa19.41■□□□□ 0.7
NUP88-207ENST00000573584 CDK12Q9NYV4 1490 aaPredicted RBP19.4■□□□□ 0.7
NUP88-207ENST00000573584 DLC1Q96QB1 1528 aa19.4■□□□□ 0.7
NUP88-207ENST00000573584 GAS2L2Q8NHY3 880 aa19.4■□□□□ 0.7
NUP88-207ENST00000573584 AATKQ6ZMQ8 1374 aa19.4■□□□□ 0.7
NUP88-207ENST00000573584 GAS2L3Q86XJ1 694 aa19.39■□□□□ 0.7
NUP88-207ENST00000573584 RIMS2Q9UQ26 1411 aa19.39■□□□□ 0.69
NUP88-207ENST00000573584 KIF24Q5T7B8 1368 aa19.38■□□□□ 0.69
NUP88-207ENST00000573584 SSFA2P28290 1259 aa19.38■□□□□ 0.69
NUP88-207ENST00000573584 NUDT16Q96DE0 195 aaKnown RBP19.37■□□□□ 0.69
NUP88-207ENST00000573584 TTC22Q5TAA0 569 aa19.37■□□□□ 0.69
NUP88-207ENST00000573584 INTS3Q68E01 1043 aaKnown RBP19.37■□□□□ 0.69
NUP88-207ENST00000573584 C16orf71Q8IYS4 520 aaPredicted RBP19.37■□□□□ 0.69
NUP88-207ENST00000573584 GOLGA6L22H0YM25 854 aa19.36■□□□□ 0.69
NUP88-207ENST00000573584 REREQ9P2R6 1566 aa19.36■□□□□ 0.69
NUP88-207ENST00000573584 NCKAP5LQ9HCH0 1330 aa19.36■□□□□ 0.69
NUP88-207ENST00000573584 A2ML1A8K2U0 1454 aa19.36■□□□□ 0.69
NUP88-207ENST00000573584 RABEP1Q15276 862 aa19.35■□□□□ 0.69
NUP88-207ENST00000573584 TXNDC2Q86VQ3 553 aa19.35■□□□□ 0.69
NUP88-207ENST00000573584 CCDC61Q9Y6R9 512 aa19.35■□□□□ 0.69
NUP88-207ENST00000573584 ANKRD44Q8N8A2 993 aa19.35■□□□□ 0.69
NUP88-207ENST00000573584 CLEC17AQ6ZS10 378 aa19.34■□□□□ 0.69
NUP88-207ENST00000573584 ESPNB1AK53 854 aa19.33■□□□□ 0.69
NUP88-207ENST00000573584 RPAP2Q8IXW5 612 aaPredicted RBP19.33■□□□□ 0.69
NUP88-207ENST00000573584 TRIM44Q96DX7 344 aaPredicted RBP19.33■□□□□ 0.69
NUP88-207ENST00000573584 NAP1L5Q96NT1 182 aaPredicted RBP19.33■□□□□ 0.69
NUP88-207ENST00000573584 USP26Q9BXU7 913 aa19.33■□□□□ 0.69
NUP88-207ENST00000573584 HAP1P54257 671 aaPredicted RBP19.33■□□□□ 0.68
NUP88-207ENST00000573584 KRT24Q2M2I5 525 aa19.33■□□□□ 0.68
NUP88-207ENST00000573584 BAG4O95429 457 aaKnown RBP19.32■□□□□ 0.68
NUP88-207ENST00000573584 AEBP1Q8IUX7 1158 aa19.32■□□□□ 0.68
NUP88-207ENST00000573584 SULT6B1Q6IMI4 303 aa19.32■□□□□ 0.68
NUP88-207ENST00000573584 OTUD7AQ8TE49 926 aaPredicted RBP19.32■□□□□ 0.68
NUP88-207ENST00000573584 CPS1P31327 1500 aa19.32■□□□□ 0.68
NUP88-207ENST00000573584 DLG5Q8TDM6 1919 aa19.31■□□□□ 0.68
NUP88-207ENST00000573584 CEP85Q6P2H3 762 aa19.31■□□□□ 0.68
NUP88-207ENST00000573584 PPP6R1Q9UPN7 881 aa19.31■□□□□ 0.68
NUP88-207ENST00000573584 DDX49Q9Y6V7 483 aaKnown RBP19.31■□□□□ 0.68
NUP88-207ENST00000573584 KNDC1Q76NI1 1749 aa19.31■□□□□ 0.68
NUP88-207ENST00000573584 METP08581 1390 aa19.31■□□□□ 0.68
NUP88-207ENST00000573584 APBB1O00213 710 aa19.31■□□□□ 0.68
NUP88-207ENST00000573584 RIMBP3CA6NJZ7 1639 aa19.3■□□□□ 0.68
NUP88-207ENST00000573584 RIMBP3BA6NNM3 1639 aa19.3■□□□□ 0.68
NUP88-207ENST00000573584 RIMBP3Q9UFD9 1639 aa19.3■□□□□ 0.68
NUP88-207ENST00000573584 CHL1O00533 1208 aa19.3■□□□□ 0.68
NUP88-207ENST00000573584 KLHL40Q2TBA0 621 aa19.3■□□□□ 0.68
NUP88-207ENST00000573584 ATP10DQ9P241 1426 aa19.29■□□□□ 0.68
NUP88-207ENST00000573584 SDSP20132 328 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms