RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 PSME1Q06323 249 aa14.73□□□□□ -0.05
PCDHGA9-201ENST00000573521 CABP2Q9NPB3 220 aa14.73□□□□□ -0.05
PCDHGA9-201ENST00000573521 ZSCAN25Q6NSZ9 544 aa14.73□□□□□ -0.05
PCDHGA9-201ENST00000573521 TULP1O00294 542 aaPredicted RBP14.73□□□□□ -0.05
PCDHGA9-201ENST00000573521 NEMFO60524 1076 aa14.73□□□□□ -0.05
PCDHGA9-201ENST00000573521 SCAF11Q99590 1463 aaKnown RBP14.73□□□□□ -0.05
PCDHGA9-201ENST00000573521 BCAR3O75815 825 aa14.73□□□□□ -0.05
PCDHGA9-201ENST00000573521 CDKL5O76039 1030 aa14.73□□□□□ -0.05
PCDHGA9-201ENST00000573521 SH2B1Q9NRF2 756 aaPredicted RBP14.73□□□□□ -0.05
PCDHGA9-201ENST00000573521 CTNNA3Q9UI47 895 aa14.73□□□□□ -0.05
PCDHGA9-201ENST00000573521 ERLIN1O75477 346 aa14.72□□□□□ -0.05
PCDHGA9-201ENST00000573521 TXLNAP40222 546 aa14.72□□□□□ -0.05
PCDHGA9-201ENST00000573521 FAM135AQ9P2D6 1515 aa14.72□□□□□ -0.05
PCDHGA9-201ENST00000573521 CCDC112Q8NEF3 446 aa14.72□□□□□ -0.05
PCDHGA9-201ENST00000573521 RALGAPBQ86X10 1494 aa14.71□□□□□ -0.05
PCDHGA9-201ENST00000573521 HMOX1P09601 288 aa14.71□□□□□ -0.05
PCDHGA9-201ENST00000573521 ARID3AQ99856 593 aa14.71□□□□□ -0.05
PCDHGA9-201ENST00000573521 APPP05067 770 aa14.71□□□□□ -0.05
PCDHGA9-201ENST00000573521 CREBRFQ8IUR6 639 aa14.71□□□□□ -0.05
PCDHGA9-201ENST00000573521 SMTNL1A8MU46 457 aa14.71□□□□□ -0.06
PCDHGA9-201ENST00000573521 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.71□□□□□ -0.06
PCDHGA9-201ENST00000573521 EIF3JO75822 258 aaKnown RBP14.7□□□□□ -0.06
PCDHGA9-201ENST00000573521 HMGB2P26583 209 aaKnown RBP14.7□□□□□ -0.06
PCDHGA9-201ENST00000573521 TMPOP42166 694 aaKnown RBP14.7□□□□□ -0.06
PCDHGA9-201ENST00000573521 PCMTD1Q96MG8 357 aaPredicted RBP14.7□□□□□ -0.06
PCDHGA9-201ENST00000573521 G3V3G9 751 aa14.7□□□□□ -0.06
PCDHGA9-201ENST00000573521 RARSP54136 660 aaKnown RBP14.7□□□□□ -0.06
PCDHGA9-201ENST00000573521 UVSSAQ2YD98 709 aa14.7□□□□□ -0.06
PCDHGA9-201ENST00000573521 DCAF8Q5TAQ9 597 aa14.7□□□□□ -0.06
PCDHGA9-201ENST00000573521 RTEL1-TNFRSF6BF6WH68 1400 aa14.7□□□□□ -0.06
PCDHGA9-201ENST00000573521 CEP57L1Q8IYX8 460 aa14.7□□□□□ -0.06
PCDHGA9-201ENST00000573521 SLC3A2P08195 630 aaKnown RBP14.7□□□□□ -0.06
PCDHGA9-201ENST00000573521 RDXP35241 583 aaKnown RBP14.7□□□□□ -0.06
PCDHGA9-201ENST00000573521 ARHGAP45Q92619 1136 aa14.7□□□□□ -0.06
PCDHGA9-201ENST00000573521 CTAGE5O15320 804 aa14.69□□□□□ -0.06
PCDHGA9-201ENST00000573521 SCAND2PQ9GZW5 306 aaPredicted RBP14.69□□□□□ -0.06
PCDHGA9-201ENST00000573521 TNMDQ9H2S6 317 aa14.69□□□□□ -0.06
PCDHGA9-201ENST00000573521 STK38Q15208 465 aa14.69□□□□□ -0.06
PCDHGA9-201ENST00000573521 BMP2KLQ5H9B9 411 aa14.69□□□□□ -0.06
PCDHGA9-201ENST00000573521 IQCEQ6IPM2 695 aa14.69□□□□□ -0.06
PCDHGA9-201ENST00000573521 BRPF3Q9ULD4 1205 aa14.69□□□□□ -0.06
PCDHGA9-201ENST00000573521 NSD3Q9BZ95 1437 aa14.69□□□□□ -0.06
PCDHGA9-201ENST00000573521 CALRP27797 417 aaKnown RBP14.69□□□□□ -0.06
PCDHGA9-201ENST00000573521 TSPYL1Q9H0U9 437 aa14.68□□□□□ -0.06
PCDHGA9-201ENST00000573521 PTPRCP08575 1304 aa14.68□□□□□ -0.06
PCDHGA9-201ENST00000573521 FOXD4L6Q3SYB3 417 aaPredicted RBP14.68□□□□□ -0.06
PCDHGA9-201ENST00000573521 FOXD4L3Q6VB84 417 aaPredicted RBP14.68□□□□□ -0.06
PCDHGA9-201ENST00000573521 WASF1Q92558 559 aa14.68□□□□□ -0.06
PCDHGA9-201ENST00000573521 GBP3Q9H0R5 595 aa14.68□□□□□ -0.06
PCDHGA9-201ENST00000573521 SLC12A5Q9H2X9 1139 aa14.68□□□□□ -0.06
PCDHGA9-201ENST00000573521 BLOC1S2Q6QNY1 142 aa14.67□□□□□ -0.06
PCDHGA9-201ENST00000573521 SLC4A2P04920 1241 aa14.67□□□□□ -0.06
PCDHGA9-201ENST00000573521 NLRP6P59044 892 aa14.67□□□□□ -0.06
PCDHGA9-201ENST00000573521 CCDC27Q2M243 656 aa14.67□□□□□ -0.06
PCDHGA9-201ENST00000573521 HDGFL1Q5TGJ6 251 aa14.67□□□□□ -0.06
PCDHGA9-201ENST00000573521 GLRX3O76003 335 aaKnown RBP14.67□□□□□ -0.06
PCDHGA9-201ENST00000573521 LEKR1Q6ZMV7 388 aa14.67□□□□□ -0.06
PCDHGA9-201ENST00000573521 AFAP1Q8N556 730 aa14.67□□□□□ -0.06
PCDHGA9-201ENST00000573521 NUP62CLQ9H1M0 184 aa14.67□□□□□ -0.06
PCDHGA9-201ENST00000573521 NCBP3Q53F19 620 aaKnown RBP14.67□□□□□ -0.06
PCDHGA9-201ENST00000573521 PRAM1Q96QH2 718 aa14.66□□□□□ -0.06
PCDHGA9-201ENST00000573521 ZNHIT6Q9NWK9 470 aaKnown RBP14.66□□□□□ -0.06
PCDHGA9-201ENST00000573521 CCDC158Q5M9N0 1113 aa14.66□□□□□ -0.06
PCDHGA9-201ENST00000573521 TRIM22Q8IYM9 498 aa14.66□□□□□ -0.06
PCDHGA9-201ENST00000573521 KIF1BPQ96EK5 621 aa14.66□□□□□ -0.06
PCDHGA9-201ENST00000573521 HMGB1P09429 215 aaKnown RBP14.66□□□□□ -0.06
PCDHGA9-201ENST00000573521 STIM1Q13586 685 aa14.66□□□□□ -0.06
PCDHGA9-201ENST00000573521 AEBP2Q6ZN18 517 aaPredicted RBP14.66□□□□□ -0.06
PCDHGA9-201ENST00000573521 RNF214Q8ND24 703 aa14.66□□□□□ -0.06
PCDHGA9-201ENST00000573521 USP8P40818 1118 aa14.65□□□□□ -0.06
PCDHGA9-201ENST00000573521 HDAC1Q13547 482 aaPredicted RBP14.65□□□□□ -0.06
PCDHGA9-201ENST00000573521 LARP1BQ659C4 914 aaKnown RBP14.65□□□□□ -0.06
PCDHGA9-201ENST00000573521 CDK19Q9BWU1 502 aa14.65□□□□□ -0.06
PCDHGA9-201ENST00000573521 EVA1CP58658 441 aa14.65□□□□□ -0.06
PCDHGA9-201ENST00000573521 CCDC183Q5T5S1 534 aa14.65□□□□□ -0.06
PCDHGA9-201ENST00000573521 TUBB4AP04350 444 aa14.65□□□□□ -0.06
PCDHGA9-201ENST00000573521 WASHC4Q2M389 1173 aa14.65□□□□□ -0.06
PCDHGA9-201ENST00000573521 VPS37DQ86XT2 251 aa14.65□□□□□ -0.06
PCDHGA9-201ENST00000573521 TMEM132EQ6IEE7 984 aa14.65□□□□□ -0.06
PCDHGA9-201ENST00000573521 NACAP1Q9BZK3 213 aa14.65□□□□□ -0.06
PCDHGA9-201ENST00000573521 MAGEC2Q9UBF1 373 aaPredicted RBP14.65□□□□□ -0.06
PCDHGA9-201ENST00000573521 MAP3K11Q16584 847 aa14.64□□□□□ -0.07
PCDHGA9-201ENST00000573521 DUSP27Q5VZP5 1158 aa14.64□□□□□ -0.07
PCDHGA9-201ENST00000573521 ADAMTS12P58397 1594 aa14.64□□□□□ -0.07
PCDHGA9-201ENST00000573521 ARHGEF12Q9NZN5 1544 aa14.64□□□□□ -0.07
PCDHGA9-201ENST00000573521 FIBPO43427 364 aa14.64□□□□□ -0.07
PCDHGA9-201ENST00000573521 HS1BP3Q53T59 392 aa14.64□□□□□ -0.07
PCDHGA9-201ENST00000573521 ANKRD36BQ8N2N9 1353 aa14.64□□□□□ -0.07
PCDHGA9-201ENST00000573521 MCM3P25205 808 aa14.63□□□□□ -0.07
PCDHGA9-201ENST00000573521 PDRG1Q9NUG6 133 aa14.63□□□□□ -0.07
PCDHGA9-201ENST00000573521 CCDC61Q9Y6R9 512 aa14.63□□□□□ -0.07
PCDHGA9-201ENST00000573521 EIF2AK4Q9P2K8 1649 aaKnown RBP14.63□□□□□ -0.07
PCDHGA9-201ENST00000573521 PDCL3Q9H2J4 239 aa14.63□□□□□ -0.07
PCDHGA9-201ENST00000573521 TCOF1Q13428 1488 aaKnown RBP14.63□□□□□ -0.07
PCDHGA9-201ENST00000573521 NEUROD6Q96NK8 337 aa14.63□□□□□ -0.07
PCDHGA9-201ENST00000573521 CDK13Q14004 1512 aaKnown RBP14.63□□□□□ -0.07
PCDHGA9-201ENST00000573521 SMC2O95347 1197 aa14.62□□□□□ -0.07
PCDHGA9-201ENST00000573521 THEMISQ8N1K5 641 aaPredicted RBP14.62□□□□□ -0.07
PCDHGA9-201ENST00000573521 TBC1D32Q96NH3 1257 aa14.62□□□□□ -0.07
PCDHGA9-201ENST00000573521 GNL3LQ9NVN8 582 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms