RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 USP35Q9P2H5 1018 aa17.97■□□□□ 0.47
TVP23A-207ENST00000573360 TTC21AQ8NDW8 1320 aa17.97■□□□□ 0.47
TVP23A-207ENST00000573360 GCP02774 474 aa17.96■□□□□ 0.47
TVP23A-207ENST00000573360 PIP4K2BP78356 416 aa17.96■□□□□ 0.47
TVP23A-207ENST00000573360 EYA1Q99502 592 aa17.96■□□□□ 0.47
TVP23A-207ENST00000573360 PANK1Q8TE04 598 aa17.96■□□□□ 0.47
TVP23A-207ENST00000573360 NECTIN2Q92692 538 aa17.96■□□□□ 0.47
TVP23A-207ENST00000573360 MSH6P52701 1360 aa17.96■□□□□ 0.47
TVP23A-207ENST00000573360 MYH16Q9H6N6 1097 aa17.96■□□□□ 0.47
TVP23A-207ENST00000573360 SKAP1Q86WV1 359 aa17.95■□□□□ 0.46
TVP23A-207ENST00000573360 TRIM35Q9UPQ4 493 aa17.95■□□□□ 0.46
TVP23A-207ENST00000573360 TNNQ9UQP3 1299 aa17.95■□□□□ 0.46
TVP23A-207ENST00000573360 PLEKHF1Q96S99 279 aa17.95■□□□□ 0.46
TVP23A-207ENST00000573360 NLRP2Q9NX02 1062 aa17.95■□□□□ 0.46
TVP23A-207ENST00000573360 RTF1Q92541 710 aaKnown RBP17.95■□□□□ 0.46
TVP23A-207ENST00000573360 SMC4Q9NTJ3 1288 aa17.95■□□□□ 0.46
TVP23A-207ENST00000573360 ADGRL3Q9HAR2 1447 aa17.95■□□□□ 0.46
TVP23A-207ENST00000573360 COG6Q9Y2V7 657 aa17.94■□□□□ 0.46
TVP23A-207ENST00000573360 HOXC9P31274 260 aa17.94■□□□□ 0.46
TVP23A-207ENST00000573360 NFE2L2Q16236 605 aa17.93■□□□□ 0.46
TVP23A-207ENST00000573360 DEKP35659 375 aaKnown RBP17.93■□□□□ 0.46
TVP23A-207ENST00000573360 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.93■□□□□ 0.46
TVP23A-207ENST00000573360 KRT24Q2M2I5 525 aa17.93■□□□□ 0.46
TVP23A-207ENST00000573360 CDC42BPGQ6DT37 1551 aa17.92■□□□□ 0.46
TVP23A-207ENST00000573360 A0A0G2JS52 829 aa17.92■□□□□ 0.46
TVP23A-207ENST00000573360 ZNF521Q96K83 1311 aa17.92■□□□□ 0.46
TVP23A-207ENST00000573360 SLAIN2Q9P270 581 aa17.92■□□□□ 0.46
TVP23A-207ENST00000573360 STRN4Q9NRL3 753 aa17.9■□□□□ 0.46
TVP23A-207ENST00000573360 RGPD8O14715 1765 aaPredicted RBP17.9■□□□□ 0.46
TVP23A-207ENST00000573360 FTSJ3Q8IY81 847 aaKnown RBP17.9■□□□□ 0.46
TVP23A-207ENST00000573360 MTHFSDQ2M296 383 aaKnown RBP17.89■□□□□ 0.45
TVP23A-207ENST00000573360 NBPF6Q5VWK0 638 aa17.88■□□□□ 0.45
TVP23A-207ENST00000573360 WDR63Q8IWG1 891 aa17.88■□□□□ 0.45
TVP23A-207ENST00000573360 NBPF4Q96M43 638 aa17.88■□□□□ 0.45
TVP23A-207ENST00000573360 IPO9Q96P70 1041 aaKnown RBP17.88■□□□□ 0.45
TVP23A-207ENST00000573360 FLT4P35916 1363 aa17.88■□□□□ 0.45
TVP23A-207ENST00000573360 TSPYL6Q8N831 410 aa17.87■□□□□ 0.45
TVP23A-207ENST00000573360 AXIN2Q9Y2T1 843 aa17.87■□□□□ 0.45
TVP23A-207ENST00000573360 BRINP3Q76B58 766 aa17.86■□□□□ 0.45
TVP23A-207ENST00000573360 PRDM11Q9NQV5 511 aa17.86■□□□□ 0.45
TVP23A-207ENST00000573360 KCNH5Q8NCM2 988 aa17.86■□□□□ 0.45
TVP23A-207ENST00000573360 ANKRD24Q8TF21 1146 aa17.86■□□□□ 0.45
TVP23A-207ENST00000573360 NPHP3Q7Z494 1330 aa17.85■□□□□ 0.45
TVP23A-207ENST00000573360 PNPLA6Q8IY17 1366 aa17.85■□□□□ 0.45
TVP23A-207ENST00000573360 ZNF428Q96B54 188 aa17.85■□□□□ 0.45
TVP23A-207ENST00000573360 C1orf167Q5SNV9 1468 aa17.84■□□□□ 0.45
TVP23A-207ENST00000573360 RARSP54136 660 aaKnown RBP17.84■□□□□ 0.45
TVP23A-207ENST00000573360 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
TVP23A-207ENST00000573360 AATKQ6ZMQ8 1374 aa17.84■□□□□ 0.45
TVP23A-207ENST00000573360 OVOS2A0A0J9YW53 1432 aa17.84■□□□□ 0.45
TVP23A-207ENST00000573360 OVOS2Q6IE36 1432 aa17.84■□□□□ 0.45
TVP23A-207ENST00000573360 MAP2P11137 1827 aaKnown RBP17.84■□□□□ 0.45
TVP23A-207ENST00000573360 NUTM2BA6NNL0 878 aaPredicted RBP17.84■□□□□ 0.45
TVP23A-207ENST00000573360 NUTM2EB1AL46 878 aaPredicted RBP17.84■□□□□ 0.45
TVP23A-207ENST00000573360 NUTM2AQ8IVF1 878 aaPredicted RBP17.84■□□□□ 0.45
TVP23A-207ENST00000573360 SSH1Q8WYL5 1049 aa17.84■□□□□ 0.45
TVP23A-207ENST00000573360 MBIPQ9NS73 344 aa17.84■□□□□ 0.45
TVP23A-207ENST00000573360 ANKARQ7Z5J8 1434 aa17.83■□□□□ 0.45
TVP23A-207ENST00000573360 MPRIPQ6WCQ1 1025 aa17.83■□□□□ 0.45
TVP23A-207ENST00000573360 TSPYL4Q9UJ04 414 aa17.83■□□□□ 0.44
TVP23A-207ENST00000573360 SBNO1A3KN83 1393 aa17.83■□□□□ 0.44
TVP23A-207ENST00000573360 ITPRIPQ8IWB1 547 aa17.83■□□□□ 0.44
TVP23A-207ENST00000573360 LMTK3Q96Q04 1460 aa17.82■□□□□ 0.44
TVP23A-207ENST00000573360 IP6K1Q92551 441 aa17.82■□□□□ 0.44
TVP23A-207ENST00000573360 LMOD3Q0VAK6 560 aa17.81■□□□□ 0.44
TVP23A-207ENST00000573360 ZNF530Q6P9A1 599 aaPredicted RBP17.81■□□□□ 0.44
TVP23A-207ENST00000573360 KNDC1Q76NI1 1749 aa17.81■□□□□ 0.44
TVP23A-207ENST00000573360 ADAMTS2O95450 1211 aa17.81■□□□□ 0.44
TVP23A-207ENST00000573360 RGS3P49796 1198 aa17.81■□□□□ 0.44
TVP23A-207ENST00000573360 NGEFQ8N5V2 710 aa17.81■□□□□ 0.44
TVP23A-207ENST00000573360 C8orf58Q8NAV2 365 aa17.81■□□□□ 0.44
TVP23A-207ENST00000573360 EVA1CP58658 441 aa17.8■□□□□ 0.44
TVP23A-207ENST00000573360 GNAI1P63096 354 aa17.8■□□□□ 0.44
TVP23A-207ENST00000573360 NOB1Q9ULX3 412 aaKnown RBP17.8■□□□□ 0.44
TVP23A-207ENST00000573360 PDE4AP27815 886 aa17.8■□□□□ 0.44
TVP23A-207ENST00000573360 TWISTNBQ3B726 338 aaPredicted RBP17.8■□□□□ 0.44
TVP23A-207ENST00000573360 DAXXQ9UER7 740 aaPredicted RBP17.8■□□□□ 0.44
TVP23A-207ENST00000573360 XRN1Q8IZH2 1706 aaKnown RBP17.8■□□□□ 0.44
TVP23A-207ENST00000573360 USP32Q8NFA0 1604 aa17.79■□□□□ 0.44
TVP23A-207ENST00000573360 RLBP1P12271 317 aa17.79■□□□□ 0.44
TVP23A-207ENST00000573360 EIF2S2P20042 333 aaKnown RBP17.79■□□□□ 0.44
TVP23A-207ENST00000573360 ITSN1Q15811 1721 aa17.79■□□□□ 0.44
TVP23A-207ENST00000573360 TOM1L2Q6ZVM7 507 aa17.78■□□□□ 0.44
TVP23A-207ENST00000573360 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
TVP23A-207ENST00000573360 COL3A1P02461 1466 aaPredicted RBP17.78■□□□□ 0.44
TVP23A-207ENST00000573360 CCDC27Q2M243 656 aa17.78■□□□□ 0.44
TVP23A-207ENST00000573360 ARHGEF25Q86VW2 580 aa17.78■□□□□ 0.44
TVP23A-207ENST00000573360 RAPGEF4Q8WZA2 1011 aa17.78■□□□□ 0.44
TVP23A-207ENST00000573360 SSH2Q76I76 1423 aa17.78■□□□□ 0.44
TVP23A-207ENST00000573360 TRMT2AQ8IZ69 625 aaKnown RBP17.78■□□□□ 0.44
TVP23A-207ENST00000573360 NALCNQ8IZF0 1738 aa17.78■□□□□ 0.44
TVP23A-207ENST00000573360 LRRC7Q96NW7 1537 aa17.78■□□□□ 0.44
TVP23A-207ENST00000573360 CALD1Q05682 793 aaKnown RBP17.77■□□□□ 0.44
TVP23A-207ENST00000573360 CDK12Q9NYV4 1490 aaPredicted RBP17.77■□□□□ 0.44
TVP23A-207ENST00000573360 LGR6Q9HBX8 967 aa17.77■□□□□ 0.43
TVP23A-207ENST00000573360 USP31Q70CQ4 1352 aa17.76■□□□□ 0.43
TVP23A-207ENST00000573360 CHD2O14647 1828 aaKnown RBP17.76■□□□□ 0.43
TVP23A-207ENST00000573360 C1orf141Q5JVX7 400 aa17.76■□□□□ 0.43
TVP23A-207ENST00000573360 GAS2L2Q8NHY3 880 aa17.76■□□□□ 0.43
TVP23A-207ENST00000573360 KIF20BQ96Q89 1820 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms