RNA–Protein interactions for RNA: ENST00000572503.1

NDE1-204, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 285 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-204ENST00000572503 IL16Q14005 1332 aa6.12□□□□□ -1.43
NDE1-204ENST00000572503 NCAPD2Q15021 1401 aa6.12□□□□□ -1.43
NDE1-204ENST00000572503 RRS1Q15050 365 aaKnown RBP6.12□□□□□ -1.43
NDE1-204ENST00000572503 PMFBP1Q8TBY8 1022 aa6.12□□□□□ -1.43
NDE1-204ENST00000572503 PHF8Q9UPP1 1060 aa6.12□□□□□ -1.43
NDE1-204ENST00000572503 COL18A1P39060 1754 aa6.11□□□□□ -1.43
NDE1-204ENST00000572503 LMO7Q8WWI1 1683 aa6.11□□□□□ -1.43
NDE1-204ENST00000572503 MED1Q15648 1581 aaPredicted RBP6.11□□□□□ -1.43
NDE1-204ENST00000572503 RTL1A6NKG5 1358 aa6.11□□□□□ -1.43
NDE1-204ENST00000572503 ARHGEF10O15013 1369 aa6.11□□□□□ -1.43
NDE1-204ENST00000572503 FLT4P35916 1363 aa6.11□□□□□ -1.43
NDE1-204ENST00000572503 MAP3K19Q56UN5 1328 aa6.11□□□□□ -1.43
NDE1-204ENST00000572503 EIF4A2Q14240 407 aaKnown RBP6.11□□□□□ -1.43
NDE1-204ENST00000572503 RRP7AQ9Y3A4 280 aaKnown RBP6.11□□□□□ -1.43
NDE1-204ENST00000572503 TMEM94Q12767 1356 aa6.1□□□□□ -1.43
NDE1-204ENST00000572503 USP19O94966 1318 aa6.1□□□□□ -1.43
NDE1-204ENST00000572503 NGDNQ8NEJ9 315 aaKnown RBP6.1□□□□□ -1.43
NDE1-204ENST00000572503 VIRMAQ69YN4 1812 aaKnown RBP6.1□□□□□ -1.43
NDE1-204ENST00000572503 RGPD5Q99666 1765 aa6.1□□□□□ -1.43
NDE1-204ENST00000572503 PXDNQ92626 1479 aa6.09□□□□□ -1.43
NDE1-204ENST00000572503 IGSF1Q8N6C5 1336 aa6.09□□□□□ -1.43
NDE1-204ENST00000572503 ABCA3Q99758 1704 aa6.09□□□□□ -1.43
NDE1-204ENST00000572503 U2SURPO15042 1029 aaKnown RBP6.09□□□□□ -1.43
NDE1-204ENST00000572503 ZNF853P0CG23 659 aa6.09□□□□□ -1.43
NDE1-204ENST00000572503 PRKAR2BP31323 418 aa6.09□□□□□ -1.43
NDE1-204ENST00000572503 NFE2L2Q16236 605 aa6.09□□□□□ -1.43
NDE1-204ENST00000572503 RBM33Q96EV2 1170 aaKnown RBP6.09□□□□□ -1.43
NDE1-204ENST00000572503 PHACTR3Q96KR7 559 aa6.09□□□□□ -1.43
NDE1-204ENST00000572503 ABCC6O95255 1503 aa6.09□□□□□ -1.44
NDE1-204ENST00000572503 FAM208AQ9UK61 1670 aaKnown RBP6.08□□□□□ -1.44
NDE1-204ENST00000572503 ADAMTS7Q9UKP4 1686 aa6.08□□□□□ -1.44
NDE1-204ENST00000572503 FANCIQ9NVI1 1328 aa6.08□□□□□ -1.44
NDE1-204ENST00000572503 NHSL1Q5SYE7 1610 aa6.08□□□□□ -1.44
NDE1-204ENST00000572503 CT47B1P0C2W7 299 aaPredicted RBP6.08□□□□□ -1.44
NDE1-204ENST00000572503 HSPA2P54652 639 aa6.08□□□□□ -1.44
NDE1-204ENST00000572503 HSP90AB2PQ58FF8 381 aa6.08□□□□□ -1.44
NDE1-204ENST00000572503 C20orf194Q5TEA3 1177 aa6.08□□□□□ -1.44
NDE1-204ENST00000572503 PROSER2Q86WR7 435 aaPredicted RBP6.08□□□□□ -1.44
NDE1-204ENST00000572503 AEBP1Q8IUX7 1158 aa6.08□□□□□ -1.44
NDE1-204ENST00000572503 EXOC6Q8TAG9 804 aa6.08□□□□□ -1.44
NDE1-204ENST00000572503 ORAI2Q96SN7 254 aa6.08□□□□□ -1.44
NDE1-204ENST00000572503 PNNQ9H307 717 aaKnown RBP6.08□□□□□ -1.44
NDE1-204ENST00000572503 C19orf44Q9H6X5 657 aa6.08□□□□□ -1.44
NDE1-204ENST00000572503 MAPK8IP3Q9UPT6 1336 aa6.07□□□□□ -1.44
NDE1-204ENST00000572503 PLIN1O60240 522 aa6.07□□□□□ -1.44
NDE1-204ENST00000572503 HMOX1P09601 288 aa6.07□□□□□ -1.44
NDE1-204ENST00000572503 HOXC9P31274 260 aa6.07□□□□□ -1.44
NDE1-204ENST00000572503 RARSP54136 660 aaKnown RBP6.07□□□□□ -1.44
NDE1-204ENST00000572503 CRB1P82279 1406 aa6.07□□□□□ -1.44
NDE1-204ENST00000572503 MSH6P52701 1360 aa6.06□□□□□ -1.44
NDE1-204ENST00000572503 SIPA1L3O60292 1781 aaPredicted RBP6.06□□□□□ -1.44
NDE1-204ENST00000572503 CACNA1FO60840 1977 aa6.06□□□□□ -1.44
NDE1-204ENST00000572503 PPM1GO15355 546 aaPredicted RBP6.06□□□□□ -1.44
NDE1-204ENST00000572503 BCAR3O75815 825 aa6.06□□□□□ -1.44
NDE1-204ENST00000572503 BRPF1P55201 1214 aaPredicted RBP6.06□□□□□ -1.44
NDE1-204ENST00000572503 RIPK4P57078 832 aa6.06□□□□□ -1.44
NDE1-204ENST00000572503 NLRP6P59044 892 aa6.06□□□□□ -1.44
NDE1-204ENST00000572503 NEUROD2Q15784 382 aa6.06□□□□□ -1.44
NDE1-204ENST00000572503 ESCO1Q5FWF5 840 aa6.06□□□□□ -1.44
NDE1-204ENST00000572503 B4GALNT3Q6L9W6 998 aa6.06□□□□□ -1.44
NDE1-204ENST00000572503 CRBNQ96SW2 442 aa6.06□□□□□ -1.44
NDE1-204ENST00000572503 EYA1Q99502 592 aa6.06□□□□□ -1.44
NDE1-204ENST00000572503 MYH16Q9H6N6 1097 aa6.06□□□□□ -1.44
NDE1-204ENST00000572503 TSHZ2Q9NRE2 1034 aa6.06□□□□□ -1.44
NDE1-204ENST00000572503 KDM3BQ7LBC6 1761 aa6.06□□□□□ -1.44
NDE1-204ENST00000572503 N4BP2Q86UW6 1770 aaPredicted RBP6.06□□□□□ -1.44
NDE1-204ENST00000572503 KDM2BQ8NHM5 1336 aa6.05□□□□□ -1.44
NDE1-204ENST00000572503 PDE3AQ14432 1141 aa6.05□□□□□ -1.44
NDE1-204ENST00000572503 SULT6B1Q6IMI4 303 aa6.05□□□□□ -1.44
NDE1-204ENST00000572503 ARHGEF25Q86VW2 580 aa6.05□□□□□ -1.44
NDE1-204ENST00000572503 ABTB2Q8N961 1025 aa6.05□□□□□ -1.44
NDE1-204ENST00000572503 IP6K1Q92551 441 aa6.05□□□□□ -1.44
NDE1-204ENST00000572503 TSR2Q969E8 191 aaKnown RBP6.05□□□□□ -1.44
NDE1-204ENST00000572503 IFT57Q9NWB7 429 aa6.05□□□□□ -1.44
NDE1-204ENST00000572503 TNS3Q68CZ2 1445 aa6.05□□□□□ -1.44
NDE1-204ENST00000572503 LTBP4Q8N2S1 1624 aa6.04□□□□□ -1.44
NDE1-204ENST00000572503 HAX1O00165 279 aa6.04□□□□□ -1.44
NDE1-204ENST00000572503 EXOSC9Q06265 439 aaKnown RBP6.04□□□□□ -1.44
NDE1-204ENST00000572503 PKD1L3Q7Z443 1732 aa6.04□□□□□ -1.44
NDE1-204ENST00000572503 FOXO3O43524 673 aa6.03□□□□□ -1.44
NDE1-204ENST00000572503 PSME1Q06323 249 aa6.03□□□□□ -1.44
NDE1-204ENST00000572503 LMOD3Q0VAK6 560 aa6.03□□□□□ -1.44
NDE1-204ENST00000572503 NUTM2GQ5VZR2 741 aa6.03□□□□□ -1.44
NDE1-204ENST00000572503 KRT28Q7Z3Y7 464 aa6.03□□□□□ -1.44
NDE1-204ENST00000572503 CADPS2Q86UW7 1296 aa6.03□□□□□ -1.44
NDE1-204ENST00000572503 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.03□□□□□ -1.44
NDE1-204ENST00000572503 KCNH5Q8NCM2 988 aa6.03□□□□□ -1.44
NDE1-204ENST00000572503 THUMPD2Q9BTF0 503 aaKnown RBP6.03□□□□□ -1.44
NDE1-204ENST00000572503 TNNQ9UQP3 1299 aa6.03□□□□□ -1.44
NDE1-204ENST00000572503 KIAA0232Q92628 1395 aa6.03□□□□□ -1.44
NDE1-204ENST00000572503 PLEKHG2Q9H7P9 1386 aa6.03□□□□□ -1.44
NDE1-204ENST00000572503 SCN11AQ9UI33 1791 aa6.03□□□□□ -1.44
NDE1-204ENST00000572503 SPATA31A3Q5VYP0 1347 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 ZNF335Q9H4Z2 1342 aaPredicted RBP6.02□□□□□ -1.45
NDE1-204ENST00000572503 OVOS2A0A0G2JMS6 1433 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 FAM83GA6ND36 823 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 CHL1O00533 1208 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 HTATSF1O43719 755 aaKnown RBP6.02□□□□□ -1.45
NDE1-204ENST00000572503 VAMP4O75379 141 aa6.02□□□□□ -1.45
NDE1-204ENST00000572503 GCP02774 474 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms