RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 SENP3-EIF4A1A0A087X0R7 540 aa11.54□□□□□ -0.56
TVP23A-205ENST00000572428 SLC26A8Q96RN1 970 aa11.54□□□□□ -0.56
TVP23A-205ENST00000572428 NCOA3Q9Y6Q9 1424 aa11.53□□□□□ -0.56
TVP23A-205ENST00000572428 LOC102724159A0A0B4J2E5 919 aa11.53□□□□□ -0.56
TVP23A-205ENST00000572428 PWP2Q15269 919 aaKnown RBP11.53□□□□□ -0.56
TVP23A-205ENST00000572428 AMOTL2Q9Y2J4 779 aa11.53□□□□□ -0.56
TVP23A-205ENST00000572428 STK26Q9P289 416 aa11.52□□□□□ -0.56
TVP23A-205ENST00000572428 NRKQ7Z2Y5 1582 aa11.52□□□□□ -0.57
TVP23A-205ENST00000572428 CD163L1Q9NR16 1453 aa11.52□□□□□ -0.57
TVP23A-205ENST00000572428 ATAD2Q6PL18 1390 aa11.51□□□□□ -0.57
TVP23A-205ENST00000572428 IRF6O14896 467 aa11.51□□□□□ -0.57
TVP23A-205ENST00000572428 PER1O15534 1290 aaPredicted RBP11.51□□□□□ -0.57
TVP23A-205ENST00000572428 KCNA6P17658 529 aa11.51□□□□□ -0.57
TVP23A-205ENST00000572428 GZF1Q9H116 711 aaPredicted RBP11.51□□□□□ -0.57
TVP23A-205ENST00000572428 KIF20BQ96Q89 1820 aa11.51□□□□□ -0.57
TVP23A-205ENST00000572428 ATP7BP35670 1465 aa11.51□□□□□ -0.57
TVP23A-205ENST00000572428 BRD1O95696 1058 aa11.51□□□□□ -0.57
TVP23A-205ENST00000572428 NPC1L1Q9UHC9 1359 aa11.51□□□□□ -0.57
TVP23A-205ENST00000572428 APPP05067 770 aa11.5□□□□□ -0.57
TVP23A-205ENST00000572428 WAPLQ7Z5K2 1190 aa11.5□□□□□ -0.57
TVP23A-205ENST00000572428 POGKQ9P215 609 aa11.5□□□□□ -0.57
TVP23A-205ENST00000572428 KTN1Q86UP2 1357 aaKnown RBP11.5□□□□□ -0.57
TVP23A-205ENST00000572428 PRKRIP1Q9H875 184 aaPredicted RBP11.49□□□□□ -0.57
TVP23A-205ENST00000572428 USP54Q70EL1 1684 aa11.49□□□□□ -0.57
TVP23A-205ENST00000572428 ANKARQ7Z5J8 1434 aa11.49□□□□□ -0.57
TVP23A-205ENST00000572428 RGL2O15211 777 aa11.48□□□□□ -0.57
TVP23A-205ENST00000572428 SEMA3FQ13275 785 aa11.48□□□□□ -0.57
TVP23A-205ENST00000572428 ADGRL3Q9HAR2 1447 aa11.48□□□□□ -0.57
TVP23A-205ENST00000572428 WASLO00401 505 aaPredicted RBP11.48□□□□□ -0.57
TVP23A-205ENST00000572428 SLC24A3Q9HC58 644 aa11.48□□□□□ -0.57
TVP23A-205ENST00000572428 NGEFQ8N5V2 710 aa11.48□□□□□ -0.57
TVP23A-205ENST00000572428 ANKRD36BQ8N2N9 1353 aa11.48□□□□□ -0.57
TVP23A-205ENST00000572428 CDK19Q9BWU1 502 aa11.47□□□□□ -0.57
TVP23A-205ENST00000572428 CPSF1Q10570 1443 aaKnown RBP11.47□□□□□ -0.57
TVP23A-205ENST00000572428 HSPA2P54652 639 aa11.47□□□□□ -0.57
TVP23A-205ENST00000572428 DCCP43146 1447 aa11.46□□□□□ -0.57
TVP23A-205ENST00000572428 MINK1Q8N4C8 1332 aaPredicted RBP11.46□□□□□ -0.57
TVP23A-205ENST00000572428 TMCO4Q5TGY1 634 aa11.46□□□□□ -0.57
TVP23A-205ENST00000572428 EGFL6Q8IUX8 553 aa11.46□□□□□ -0.57
TVP23A-205ENST00000572428 SENP3Q9H4L4 574 aaPredicted RBP11.46□□□□□ -0.57
TVP23A-205ENST00000572428 GPBP1L1Q9HC44 474 aaPredicted RBP11.46□□□□□ -0.57
TVP23A-205ENST00000572428 KIF1AQ12756 1690 aa11.45□□□□□ -0.58
TVP23A-205ENST00000572428 HSP90AB4PQ58FF6 505 aa11.45□□□□□ -0.58
TVP23A-205ENST00000572428 PARD3Q8TEW0 1356 aa11.45□□□□□ -0.58
TVP23A-205ENST00000572428 EXOC8Q8IYI6 725 aa11.45□□□□□ -0.58
TVP23A-205ENST00000572428 PANK3Q9H999 370 aa11.45□□□□□ -0.58
TVP23A-205ENST00000572428 LRRC7Q96NW7 1537 aa11.43□□□□□ -0.58
TVP23A-205ENST00000572428 CARD10Q9BWT7 1032 aa11.43□□□□□ -0.58
TVP23A-205ENST00000572428 CABP2Q9NPB3 220 aa11.43□□□□□ -0.58
TVP23A-205ENST00000572428 SAFB2Q14151 953 aaKnown RBP eCLIP11.43□□□□□ -0.58
TVP23A-205ENST00000572428 MARF1Q9Y4F3 1742 aaKnown RBP11.43□□□□□ -0.58
TVP23A-205ENST00000572428 PPIP5K1Q6PFW1 1433 aa11.43□□□□□ -0.58
TVP23A-205ENST00000572428 DMRT2Q9Y5R5 561 aa11.43□□□□□ -0.58
TVP23A-205ENST00000572428 PRR36Q9H6K5 1346 aa11.43□□□□□ -0.58
TVP23A-205ENST00000572428 MKRN3Q13064 507 aaKnown RBP11.42□□□□□ -0.58
TVP23A-205ENST00000572428 CARD14Q9BXL6 1004 aa11.42□□□□□ -0.58
TVP23A-205ENST00000572428 A0A1W2PP64 1363 aa11.42□□□□□ -0.58
TVP23A-205ENST00000572428 POLR3AO14802 1390 aaPredicted RBP11.42□□□□□ -0.58
TVP23A-205ENST00000572428 NSD2O96028 1365 aa11.42□□□□□ -0.58
TVP23A-205ENST00000572428 LTBP4Q8N2S1 1624 aa11.42□□□□□ -0.58
TVP23A-205ENST00000572428 PLEKHG3A1L390 1219 aa11.41□□□□□ -0.58
TVP23A-205ENST00000572428 SMARCA5O60264 1052 aaPredicted RBP11.41□□□□□ -0.58
TVP23A-205ENST00000572428 SRPK2P78362 688 aaKnown RBP11.41□□□□□ -0.58
TVP23A-205ENST00000572428 LMOD2Q6P5Q4 547 aa11.41□□□□□ -0.58
TVP23A-205ENST00000572428 SLC12A5Q9H2X9 1139 aa11.41□□□□□ -0.58
TVP23A-205ENST00000572428 SSH2Q76I76 1423 aa11.41□□□□□ -0.58
TVP23A-205ENST00000572428 AXDND1Q5T1B0 1012 aaPredicted RBP11.41□□□□□ -0.58
TVP23A-205ENST00000572428 DNAJC14Q6Y2X3 702 aaPredicted RBP11.41□□□□□ -0.58
TVP23A-205ENST00000572428 NUDT16Q96DE0 195 aaKnown RBP11.41□□□□□ -0.58
TVP23A-205ENST00000572428 RIPOR2Q9Y4F9 1068 aa11.41□□□□□ -0.58
TVP23A-205ENST00000572428 TRPM3Q9HCF6 1732 aaPredicted RBP11.4□□□□□ -0.58
TVP23A-205ENST00000572428 E9PSI1 815 aa11.4□□□□□ -0.58
TVP23A-205ENST00000572428 CCDC61Q9Y6R9 512 aa11.4□□□□□ -0.58
TVP23A-205ENST00000572428 RALBP1Q15311 655 aa11.4□□□□□ -0.58
TVP23A-205ENST00000572428 NSD3Q9BZ95 1437 aa11.4□□□□□ -0.58
TVP23A-205ENST00000572428 HSP90AA1P07900 732 aaKnown RBP11.4□□□□□ -0.59
TVP23A-205ENST00000572428 MRS2Q9HD23 443 aa11.4□□□□□ -0.59
TVP23A-205ENST00000572428 EDC4Q6P2E9 1401 aaKnown RBP11.39□□□□□ -0.59
TVP23A-205ENST00000572428 HNRNPUQ00839 825 aaKnown RBP eCLIP11.39□□□□□ -0.59
TVP23A-205ENST00000572428 BRD4O60885 1362 aaPredicted RBP11.39□□□□□ -0.59
TVP23A-205ENST00000572428 TERF2IPQ9NYB0 399 aa11.38□□□□□ -0.59
TVP23A-205ENST00000572428 TMEM94Q12767 1356 aa11.38□□□□□ -0.59
TVP23A-205ENST00000572428 PIK3C2AO00443 1686 aa11.37□□□□□ -0.59
TVP23A-205ENST00000572428 MST1RQ04912 1400 aa11.37□□□□□ -0.59
TVP23A-205ENST00000572428 CABP1Q9NZU7 370 aa11.37□□□□□ -0.59
TVP23A-205ENST00000572428 PRR29P0C7W0 189 aa11.37□□□□□ -0.59
TVP23A-205ENST00000572428 EVI5LQ96CN4 794 aa11.37□□□□□ -0.59
TVP23A-205ENST00000572428 KNSTRNQ9Y448 316 aa11.37□□□□□ -0.59
TVP23A-205ENST00000572428 USP6P35125 1406 aa11.37□□□□□ -0.59
TVP23A-205ENST00000572428 C19orf44Q9H6X5 657 aa11.36□□□□□ -0.59
TVP23A-205ENST00000572428 KAT6BQ8WYB5 2073 aa11.36□□□□□ -0.59
TVP23A-205ENST00000572428 MAP2P11137 1827 aaKnown RBP11.36□□□□□ -0.59
TVP23A-205ENST00000572428 ALS2Q96Q42 1657 aa11.36□□□□□ -0.59
TVP23A-205ENST00000572428 RINLQ6ZS11 566 aa11.36□□□□□ -0.59
TVP23A-205ENST00000572428 PROSER2Q86WR7 435 aaPredicted RBP11.36□□□□□ -0.59
TVP23A-205ENST00000572428 C1orf167Q5SNV9 1468 aa11.35□□□□□ -0.59
TVP23A-205ENST00000572428 VASPP50552 380 aaPredicted RBP11.35□□□□□ -0.59
TVP23A-205ENST00000572428 CCDC184Q52MB2 194 aa11.35□□□□□ -0.59
TVP23A-205ENST00000572428 SPTY2D1Q68D10 685 aaPredicted RBP11.35□□□□□ -0.59
TVP23A-205ENST00000572428 NBPF11Q86T75 865 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms