RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 KIF24Q5T7B8 1368 aa8.05□□□□□ -1.12
TRAPPC1-204ENST00000571947 C1orf167Q5SNV9 1468 aa8.05□□□□□ -1.12
TRAPPC1-204ENST00000571947 MST1RQ04912 1400 aa8.04□□□□□ -1.12
TRAPPC1-204ENST00000571947 SLIT3O75094 1523 aa8.04□□□□□ -1.12
TRAPPC1-204ENST00000571947 ESCO1Q5FWF5 840 aa8.04□□□□□ -1.12
TRAPPC1-204ENST00000571947 RNF39Q9H2S5 420 aa8.04□□□□□ -1.12
TRAPPC1-204ENST00000571947 SPINK5Q9NQ38 1064 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC1-204ENST00000571947 PPP4R2Q9NY27 417 aa8.04□□□□□ -1.12
TRAPPC1-204ENST00000571947 RRP7AQ9Y3A4 280 aaKnown RBP8.04□□□□□ -1.12
TRAPPC1-204ENST00000571947 SBNO1A3KN83 1393 aa8.04□□□□□ -1.12
TRAPPC1-204ENST00000571947 FLT4P35916 1363 aa8.03□□□□□ -1.12
TRAPPC1-204ENST00000571947 TMEM94Q12767 1356 aa8.03□□□□□ -1.12
TRAPPC1-204ENST00000571947 NEFMP07197 916 aa8.03□□□□□ -1.12
TRAPPC1-204ENST00000571947 NLRP6P59044 892 aa8.03□□□□□ -1.12
TRAPPC1-204ENST00000571947 NEUROD2Q15784 382 aa8.03□□□□□ -1.12
TRAPPC1-204ENST00000571947 ABTB2Q8N961 1025 aa8.03□□□□□ -1.12
TRAPPC1-204ENST00000571947 MAP3K19Q56UN5 1328 aa8.03□□□□□ -1.12
TRAPPC1-204ENST00000571947 FAM208AQ9UK61 1670 aaKnown RBP8.02□□□□□ -1.13
TRAPPC1-204ENST00000571947 PRKAR2BP31323 418 aa8.02□□□□□ -1.13
TRAPPC1-204ENST00000571947 PSME1Q06323 249 aa8.02□□□□□ -1.13
TRAPPC1-204ENST00000571947 EIF4A2Q14240 407 aaKnown RBP8.02□□□□□ -1.13
TRAPPC1-204ENST00000571947 ORAI2Q96SN7 254 aa8.02□□□□□ -1.13
TRAPPC1-204ENST00000571947 TRIM35Q9UPQ4 493 aa8.02□□□□□ -1.13
TRAPPC1-204ENST00000571947 COL18A1P39060 1754 aa8.02□□□□□ -1.13
TRAPPC1-204ENST00000571947 IL16Q14005 1332 aa8.02□□□□□ -1.13
TRAPPC1-204ENST00000571947 CAMTA1Q9Y6Y1 1673 aa8.02□□□□□ -1.13
TRAPPC1-204ENST00000571947 ABCA3Q99758 1704 aa8.01□□□□□ -1.13
TRAPPC1-204ENST00000571947 RTL1A6NKG5 1358 aa8.01□□□□□ -1.13
TRAPPC1-204ENST00000571947 ARHGEF10O15013 1369 aa8.01□□□□□ -1.13
TRAPPC1-204ENST00000571947 NHSL1Q5SYE7 1610 aa8.01□□□□□ -1.13
TRAPPC1-204ENST00000571947 PAK3O75914 559 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC1-204ENST00000571947 HMOX1P09601 288 aa8.01□□□□□ -1.13
TRAPPC1-204ENST00000571947 ATF3P18847 181 aa8.01□□□□□ -1.13
TRAPPC1-204ENST00000571947 KCNA4P22459 653 aa8.01□□□□□ -1.13
TRAPPC1-204ENST00000571947 RIPK4P57078 832 aa8.01□□□□□ -1.13
TRAPPC1-204ENST00000571947 NFE2L2Q16236 605 aa8.01□□□□□ -1.13
TRAPPC1-204ENST00000571947 PELP1Q8IZL8 1130 aaKnown RBP8.01□□□□□ -1.13
TRAPPC1-204ENST00000571947 MSH6P52701 1360 aa8□□□□□ -1.13
TRAPPC1-204ENST00000571947 AMPHP49418 695 aa8□□□□□ -1.13
TRAPPC1-204ENST00000571947 HSP90AB2PQ58FF8 381 aa8□□□□□ -1.13
TRAPPC1-204ENST00000571947 NUTM2GQ5VZR2 741 aa8□□□□□ -1.13
TRAPPC1-204ENST00000571947 MYH16Q9H6N6 1097 aa8□□□□□ -1.13
TRAPPC1-204ENST00000571947 LRRC37A3O60309 1634 aa8□□□□□ -1.13
TRAPPC1-204ENST00000571947 LMO7Q8WWI1 1683 aa7.99□□□□□ -1.13
TRAPPC1-204ENST00000571947 SOX12O15370 315 aa7.99□□□□□ -1.13
TRAPPC1-204ENST00000571947 FOXO3O43524 673 aa7.99□□□□□ -1.13
TRAPPC1-204ENST00000571947 MED1Q15648 1581 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC1-204ENST00000571947 KRT28Q7Z3Y7 464 aa7.99□□□□□ -1.13
TRAPPC1-204ENST00000571947 CADPS2Q86UW7 1296 aa7.99□□□□□ -1.13
TRAPPC1-204ENST00000571947 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC1-204ENST00000571947 KCNH5Q8NCM2 988 aa7.99□□□□□ -1.13
TRAPPC1-204ENST00000571947 PHACTR3Q96KR7 559 aa7.99□□□□□ -1.13
TRAPPC1-204ENST00000571947 KDRP35968 1356 aa7.98□□□□□ -1.13
TRAPPC1-204ENST00000571947 HOXC9P31274 260 aa7.98□□□□□ -1.13
TRAPPC1-204ENST00000571947 LMOD3Q0VAK6 560 aa7.98□□□□□ -1.13
TRAPPC1-204ENST00000571947 SULT6B1Q6IMI4 303 aa7.98□□□□□ -1.13
TRAPPC1-204ENST00000571947 PXDNQ92626 1479 aa7.98□□□□□ -1.13
TRAPPC1-204ENST00000571947 USP19O94966 1318 aa7.98□□□□□ -1.13
TRAPPC1-204ENST00000571947 IGSF1Q8N6C5 1336 aa7.98□□□□□ -1.13
TRAPPC1-204ENST00000571947 PLIN1O60240 522 aa7.97□□□□□ -1.13
TRAPPC1-204ENST00000571947 CT47B1P0C2W7 299 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC1-204ENST00000571947 CALD1Q05682 793 aaKnown RBP7.97□□□□□ -1.13
TRAPPC1-204ENST00000571947 AEBP1Q8IUX7 1158 aa7.97□□□□□ -1.13
TRAPPC1-204ENST00000571947 EXOC6Q8TAG9 804 aa7.97□□□□□ -1.13
TRAPPC1-204ENST00000571947 IP6K1Q92551 441 aa7.97□□□□□ -1.13
TRAPPC1-204ENST00000571947 ABCC6O95255 1503 aa7.97□□□□□ -1.13
TRAPPC1-204ENST00000571947 FANCIQ9NVI1 1328 aa7.97□□□□□ -1.13
TRAPPC1-204ENST00000571947 SIPA1L3O60292 1781 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC1-204ENST00000571947 XPCQ01831 940 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC1-204ENST00000571947 CACNB1Q02641 598 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC1-204ENST00000571947 C1QBPQ07021 282 aaKnown RBP7.96□□□□□ -1.14
TRAPPC1-204ENST00000571947 B4GALNT3Q6L9W6 998 aa7.96□□□□□ -1.14
TRAPPC1-204ENST00000571947 CRBNQ96SW2 442 aa7.96□□□□□ -1.14
TRAPPC1-204ENST00000571947 EYA1Q99502 592 aa7.96□□□□□ -1.14
TRAPPC1-204ENST00000571947 KDM3BQ7LBC6 1761 aa7.96□□□□□ -1.14
TRAPPC1-204ENST00000571947 SCN11AQ9UI33 1791 aa7.96□□□□□ -1.14
TRAPPC1-204ENST00000571947 NPHP3Q7Z494 1330 aa7.96□□□□□ -1.14
TRAPPC1-204ENST00000571947 ZNF335Q9H4Z2 1342 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC1-204ENST00000571947 TNS3Q68CZ2 1445 aa7.95□□□□□ -1.14
TRAPPC1-204ENST00000571947 BCAR3O75815 825 aa7.95□□□□□ -1.14
TRAPPC1-204ENST00000571947 ZNF853P0CG23 659 aa7.95□□□□□ -1.14
TRAPPC1-204ENST00000571947 RARSP54136 660 aaKnown RBP7.95□□□□□ -1.14
TRAPPC1-204ENST00000571947 EXOSC9Q06265 439 aaKnown RBP7.95□□□□□ -1.14
TRAPPC1-204ENST00000571947 TSR2Q969E8 191 aaKnown RBP7.95□□□□□ -1.14
TRAPPC1-204ENST00000571947 CCDC136Q96JN2 1154 aa7.95□□□□□ -1.14
TRAPPC1-204ENST00000571947 NCAPD2Q15021 1401 aa7.95□□□□□ -1.14
TRAPPC1-204ENST00000571947 GCP02774 474 aa7.94□□□□□ -1.14
TRAPPC1-204ENST00000571947 GNAI1P63096 354 aa7.94□□□□□ -1.14
TRAPPC1-204ENST00000571947 PDE3AQ14432 1141 aa7.94□□□□□ -1.14
TRAPPC1-204ENST00000571947 C20orf194Q5TEA3 1177 aa7.94□□□□□ -1.14
TRAPPC1-204ENST00000571947 ARHGEF25Q86VW2 580 aa7.94□□□□□ -1.14
TRAPPC1-204ENST00000571947 IFT57Q9NWB7 429 aa7.94□□□□□ -1.14
TRAPPC1-204ENST00000571947 ADAMTS7Q9UKP4 1686 aa7.94□□□□□ -1.14
TRAPPC1-204ENST00000571947 N4BP2Q86UW6 1770 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC1-204ENST00000571947 PKD1L3Q7Z443 1732 aa7.93□□□□□ -1.14
TRAPPC1-204ENST00000571947 PARP4Q9UKK3 1724 aaKnown RBP7.93□□□□□ -1.14
TRAPPC1-204ENST00000571947 LMOD2Q6P5Q4 547 aa7.93□□□□□ -1.14
TRAPPC1-204ENST00000571947 GAS2L2Q8NHY3 880 aa7.93□□□□□ -1.14
TRAPPC1-204ENST00000571947 THUMPD2Q9BTF0 503 aaKnown RBP7.93□□□□□ -1.14
TRAPPC1-204ENST00000571947 SPATA31A3Q5VYP0 1347 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms