RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 ILDR2Q71H61 639 aa14.53□□□□□ -0.08
NPLOC4-203ENST00000570300 TNS3Q68CZ2 1445 aa14.52□□□□□ -0.08
NPLOC4-203ENST00000570300 ARHGEF10O15013 1369 aa14.52□□□□□ -0.08
NPLOC4-203ENST00000570300 SPATA31A3Q5VYP0 1347 aa14.52□□□□□ -0.08
NPLOC4-203ENST00000570300 NHSL1Q5SYE7 1610 aa14.52□□□□□ -0.09
NPLOC4-203ENST00000570300 U2SURPO15042 1029 aaKnown RBP14.51□□□□□ -0.09
NPLOC4-203ENST00000570300 PPM1GO15355 546 aaPredicted RBP14.51□□□□□ -0.09
NPLOC4-203ENST00000570300 EIF4A2Q14240 407 aaKnown RBP14.51□□□□□ -0.09
NPLOC4-203ENST00000570300 CCDC146Q8IYE0 955 aa14.51□□□□□ -0.09
NPLOC4-203ENST00000570300 TCP11L2Q8N4U5 519 aa14.51□□□□□ -0.09
NPLOC4-203ENST00000570300 CERKQ8TCT0 537 aa14.51□□□□□ -0.09
NPLOC4-203ENST00000570300 RSPH6AQ9H0K4 717 aa14.51□□□□□ -0.09
NPLOC4-203ENST00000570300 ABCC6O95255 1503 aa14.51□□□□□ -0.09
NPLOC4-203ENST00000570300 GCP02774 474 aa14.5□□□□□ -0.09
NPLOC4-203ENST00000570300 IP6K1Q92551 441 aa14.5□□□□□ -0.09
NPLOC4-203ENST00000570300 LTN1O94822 1766 aa14.5□□□□□ -0.09
NPLOC4-203ENST00000570300 KDRP35968 1356 aa14.49□□□□□ -0.09
NPLOC4-203ENST00000570300 HOXC9P31274 260 aa14.49□□□□□ -0.09
NPLOC4-203ENST00000570300 HSP90AB2PQ58FF8 381 aa14.49□□□□□ -0.09
NPLOC4-203ENST00000570300 ARHGEF25Q86VW2 580 aa14.49□□□□□ -0.09
NPLOC4-203ENST00000570300 TRMT2AQ8IZ69 625 aaKnown RBP14.49□□□□□ -0.09
NPLOC4-203ENST00000570300 AMPHP49418 695 aa14.48□□□□□ -0.09
NPLOC4-203ENST00000570300 GOLGA2Q08379 1002 aa14.48□□□□□ -0.09
NPLOC4-203ENST00000570300 WDR63Q8IWG1 891 aa14.48□□□□□ -0.09
NPLOC4-203ENST00000570300 CRYBG1Q9Y4K1 1723 aa14.48□□□□□ -0.09
NPLOC4-203ENST00000570300 XPCQ01831 940 aaPredicted RBP14.47□□□□□ -0.09
NPLOC4-203ENST00000570300 NUTM2GQ5VZR2 741 aa14.47□□□□□ -0.09
NPLOC4-203ENST00000570300 WWC1Q8IX03 1113 aa14.47□□□□□ -0.09
NPLOC4-203ENST00000570300 IGSF1Q8N6C5 1336 aa14.46□□□□□ -0.09
NPLOC4-203ENST00000570300 MAPK8IP3Q9UPT6 1336 aa14.46□□□□□ -0.09
NPLOC4-203ENST00000570300 SLFN5Q08AF3 891 aa14.46□□□□□ -0.09
NPLOC4-203ENST00000570300 CPDO75976 1380 aa14.46□□□□□ -0.1
NPLOC4-203ENST00000570300 AHDC1Q5TGY3 1603 aaPredicted RBP14.45□□□□□ -0.1
NPLOC4-203ENST00000570300 E9PSI1 815 aa14.45□□□□□ -0.1
NPLOC4-203ENST00000570300 NEFMP07197 916 aa14.45□□□□□ -0.1
NPLOC4-203ENST00000570300 PRKAR2BP31323 418 aa14.45□□□□□ -0.1
NPLOC4-203ENST00000570300 TMPOP42166 694 aaKnown RBP14.45□□□□□ -0.1
NPLOC4-203ENST00000570300 NCAPD2Q15021 1401 aa14.45□□□□□ -0.1
NPLOC4-203ENST00000570300 IL16Q14005 1332 aa14.44□□□□□ -0.1
NPLOC4-203ENST00000570300 RNF123Q5XPI4 1314 aa14.44□□□□□ -0.1
NPLOC4-203ENST00000570300 SOX12O15370 315 aa14.43□□□□□ -0.1
NPLOC4-203ENST00000570300 NFE2L2Q16236 605 aa14.43□□□□□ -0.1
NPLOC4-203ENST00000570300 DUSP27Q5VZP5 1158 aa14.43□□□□□ -0.1
NPLOC4-203ENST00000570300 DDX17Q92841 729 aaKnown RBP14.43□□□□□ -0.1
NPLOC4-203ENST00000570300 SALL2Q9Y467 1007 aaPredicted RBP14.43□□□□□ -0.1
NPLOC4-203ENST00000570300 CDCA7LQ96GN5 454 aa14.42□□□□□ -0.1
NPLOC4-203ENST00000570300 EYA1Q99502 592 aa14.42□□□□□ -0.1
NPLOC4-203ENST00000570300 CAMTA1Q9Y6Y1 1673 aa14.42□□□□□ -0.1
NPLOC4-203ENST00000570300 COL18A1P39060 1754 aa14.42□□□□□ -0.1
NPLOC4-203ENST00000570300 SULT6B1Q6IMI4 303 aa14.41□□□□□ -0.1
NPLOC4-203ENST00000570300 LMOD2Q6P5Q4 547 aa14.41□□□□□ -0.1
NPLOC4-203ENST00000570300 PHACTR3Q96KR7 559 aa14.41□□□□□ -0.1
NPLOC4-203ENST00000570300 TRIM35Q9UPQ4 493 aa14.41□□□□□ -0.1
NPLOC4-203ENST00000570300 GTF3C3Q9Y5Q9 886 aa14.41□□□□□ -0.1
NPLOC4-203ENST00000570300 PLEKHG2Q9H7P9 1386 aa14.41□□□□□ -0.1
NPLOC4-203ENST00000570300 ROBO1Q9Y6N7 1651 aa14.41□□□□□ -0.1
NPLOC4-203ENST00000570300 SOCS7O14512 581 aa14.4□□□□□ -0.1
NPLOC4-203ENST00000570300 HMOX1P09601 288 aa14.4□□□□□ -0.1
NPLOC4-203ENST00000570300 RIPK4P57078 832 aa14.39□□□□□ -0.11
NPLOC4-203ENST00000570300 LMOD3Q0VAK6 560 aa14.39□□□□□ -0.11
NPLOC4-203ENST00000570300 AEBP1Q8IUX7 1158 aa14.39□□□□□ -0.11
NPLOC4-203ENST00000570300 LMO7Q8WWI1 1683 aa14.39□□□□□ -0.11
NPLOC4-203ENST00000570300 ABCA3Q99758 1704 aa14.38□□□□□ -0.11
NPLOC4-203ENST00000570300 SENP3-EIF4A1A0A087X0R7 540 aa14.38□□□□□ -0.11
NPLOC4-203ENST00000570300 CALD1Q05682 793 aaKnown RBP14.38□□□□□ -0.11
NPLOC4-203ENST00000570300 ERICH6BQ5W0A0 696 aa14.38□□□□□ -0.11
NPLOC4-203ENST00000570300 LRRC59Q96AG4 307 aaKnown RBP14.38□□□□□ -0.11
NPLOC4-203ENST00000570300 RRP7AQ9Y3A4 280 aaKnown RBP14.38□□□□□ -0.11
NPLOC4-203ENST00000570300 COL22A1Q8NFW1 1626 aaPredicted RBP14.37□□□□□ -0.11
NPLOC4-203ENST00000570300 FAM208AQ9UK61 1670 aaKnown RBP14.37□□□□□ -0.11
NPLOC4-203ENST00000570300 TOM1O60784 492 aa14.37□□□□□ -0.11
NPLOC4-203ENST00000570300 MYH16Q9H6N6 1097 aa14.37□□□□□ -0.11
NPLOC4-203ENST00000570300 SPINK5Q9NQ38 1064 aaPredicted RBP14.37□□□□□ -0.11
NPLOC4-203ENST00000570300 SUPT16HQ9Y5B9 1047 aaKnown RBP14.37□□□□□ -0.11
NPLOC4-203ENST00000570300 HTATSF1O43719 755 aaKnown RBP14.36□□□□□ -0.11
NPLOC4-203ENST00000570300 NEUROD2Q15784 382 aa14.36□□□□□ -0.11
NPLOC4-203ENST00000570300 RCAN3Q9UKA8 241 aa14.36□□□□□ -0.11
NPLOC4-203ENST00000570300 DLG5Q8TDM6 1919 aa14.36□□□□□ -0.11
NPLOC4-203ENST00000570300 ERBB3P21860 1342 aa14.36□□□□□ -0.11
NPLOC4-203ENST00000570300 CT47B1P0C2W7 299 aaPredicted RBP14.35□□□□□ -0.11
NPLOC4-203ENST00000570300 GAS2L2Q8NHY3 880 aa14.35□□□□□ -0.11
NPLOC4-203ENST00000570300 AXIN2Q9Y2T1 843 aa14.35□□□□□ -0.11
NPLOC4-203ENST00000570300 NEFLP07196 543 aa14.34□□□□□ -0.11
NPLOC4-203ENST00000570300 ZC3H6P61129 1189 aaKnown RBP14.34□□□□□ -0.11
NPLOC4-203ENST00000570300 NBPF6Q5VWK0 638 aa14.34□□□□□ -0.11
NPLOC4-203ENST00000570300 ANKRD24Q8TF21 1146 aa14.34□□□□□ -0.11
NPLOC4-203ENST00000570300 NBPF4Q96M43 638 aa14.34□□□□□ -0.11
NPLOC4-203ENST00000570300 KIAA0232Q92628 1395 aa14.34□□□□□ -0.11
NPLOC4-203ENST00000570300 CABLES1Q8TDN4 633 aa14.33□□□□□ -0.12
NPLOC4-203ENST00000570300 COL16A1Q07092 1604 aaPredicted RBP14.33□□□□□ -0.12
NPLOC4-203ENST00000570300 RGPD5Q99666 1765 aa14.32□□□□□ -0.12
NPLOC4-203ENST00000570300 ZNF853P0CG23 659 aa14.32□□□□□ -0.12
NPLOC4-203ENST00000570300 IFT57Q9NWB7 429 aa14.32□□□□□ -0.12
NPLOC4-203ENST00000570300 MTHFSDQ2M296 383 aaKnown RBP14.31□□□□□ -0.12
NPLOC4-203ENST00000570300 RGPD2P0DJD1 1756 aa14.31□□□□□ -0.12
NPLOC4-203ENST00000570300 GNAI1P63096 354 aa14.3□□□□□ -0.12
NPLOC4-203ENST00000570300 AMOTQ4VCS5 1084 aa14.3□□□□□ -0.12
NPLOC4-203ENST00000570300 LTV1Q96GA3 475 aaPredicted RBP14.3□□□□□ -0.12
NPLOC4-203ENST00000570300 CFAP44Q96MT7 982 aa14.3□□□□□ -0.12
NPLOC4-203ENST00000570300 PHLPP1O60346 1717 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms