RNA–Protein interactions for RNA: ENST00000569936.5

STRA6-210, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 1 (best)

Gene STRA6, Length 2,151 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-210ENST00000569936 MARF1Q9Y4F3 1742 aaKnown RBP18.9■□□□□ 0.62
STRA6-210ENST00000569936 FRAT1Q92837 279 aaPredicted RBP18.89■□□□□ 0.62
STRA6-210ENST00000569936 USP54Q70EL1 1684 aa18.89■□□□□ 0.61
STRA6-210ENST00000569936 SKAP1Q86WV1 359 aa18.89■□□□□ 0.61
STRA6-210ENST00000569936 DAXXQ9UER7 740 aaPredicted RBP18.89■□□□□ 0.61
STRA6-210ENST00000569936 C8orf34Q49A92 452 aa18.88■□□□□ 0.61
STRA6-210ENST00000569936 AATKQ6ZMQ8 1374 aa18.88■□□□□ 0.61
STRA6-210ENST00000569936 SOX12O15370 315 aa18.88■□□□□ 0.61
STRA6-210ENST00000569936 WDR43Q15061 677 aaKnown RBP eCLIP18.88■□□□□ 0.61
STRA6-210ENST00000569936 LMOD2Q6P5Q4 547 aa18.88■□□□□ 0.61
STRA6-210ENST00000569936 POLKQ9UBT6 870 aa18.87■□□□□ 0.61
STRA6-210ENST00000569936 C20orf194Q5TEA3 1177 aa18.86■□□□□ 0.61
STRA6-210ENST00000569936 RRS1Q15050 365 aaKnown RBP18.85■□□□□ 0.61
STRA6-210ENST00000569936 EMILIN1Q9Y6C2 1016 aa18.85■□□□□ 0.61
STRA6-210ENST00000569936 SHPRHQ149N8 1683 aa18.84■□□□□ 0.61
STRA6-210ENST00000569936 ALS2Q96Q42 1657 aa18.84■□□□□ 0.61
STRA6-210ENST00000569936 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.84■□□□□ 0.61
STRA6-210ENST00000569936 PXDNQ92626 1479 aa18.84■□□□□ 0.61
STRA6-210ENST00000569936 VIRMAQ69YN4 1812 aaKnown RBP18.83■□□□□ 0.61
STRA6-210ENST00000569936 SBNO1A3KN83 1393 aa18.83■□□□□ 0.6
STRA6-210ENST00000569936 ZNF521Q96K83 1311 aa18.83■□□□□ 0.6
STRA6-210ENST00000569936 SLC4A3P48751 1232 aa18.83■□□□□ 0.6
STRA6-210ENST00000569936 DUSP27Q5VZP5 1158 aa18.82■□□□□ 0.6
STRA6-210ENST00000569936 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.82■□□□□ 0.6
STRA6-210ENST00000569936 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
STRA6-210ENST00000569936 ROBO1Q9Y6N7 1651 aa18.81■□□□□ 0.6
STRA6-210ENST00000569936 NHSL1Q5SYE7 1610 aa18.81■□□□□ 0.6
STRA6-210ENST00000569936 PLEKHG5O94827 1062 aa18.81■□□□□ 0.6
STRA6-210ENST00000569936 CDK12Q9NYV4 1490 aaPredicted RBP18.81■□□□□ 0.6
STRA6-210ENST00000569936 COL3A1P02461 1466 aaPredicted RBP18.8■□□□□ 0.6
STRA6-210ENST00000569936 TNS3Q68CZ2 1445 aa18.8■□□□□ 0.6
STRA6-210ENST00000569936 PNPLA6Q8IY17 1366 aa18.8■□□□□ 0.6
STRA6-210ENST00000569936 LTN1O94822 1766 aa18.79■□□□□ 0.6
STRA6-210ENST00000569936 DIAPH1O60610 1272 aaKnown RBP18.79■□□□□ 0.6
STRA6-210ENST00000569936 PEAK1Q9H792 1746 aa18.79■□□□□ 0.6
STRA6-210ENST00000569936 SPATA31A3Q5VYP0 1347 aa18.78■□□□□ 0.6
STRA6-210ENST00000569936 FAM43AQ8N2R8 423 aa18.78■□□□□ 0.6
STRA6-210ENST00000569936 KCNH5Q8NCM2 988 aa18.78■□□□□ 0.6
STRA6-210ENST00000569936 SOS2Q07890 1332 aaPredicted RBP18.78■□□□□ 0.6
STRA6-210ENST00000569936 MAP3K19Q56UN5 1328 aa18.78■□□□□ 0.6
STRA6-210ENST00000569936 TOM1O60784 492 aa18.77■□□□□ 0.6
STRA6-210ENST00000569936 UBE2Q2Q8WVN8 375 aa18.77■□□□□ 0.6
STRA6-210ENST00000569936 SLIT3O75094 1523 aa18.77■□□□□ 0.59
STRA6-210ENST00000569936 U2SURPO15042 1029 aaKnown RBP18.76■□□□□ 0.59
STRA6-210ENST00000569936 AMPHP49418 695 aa18.76■□□□□ 0.59
STRA6-210ENST00000569936 ARHGEF10O15013 1369 aa18.76■□□□□ 0.59
STRA6-210ENST00000569936 NFAT5O94916 1531 aa18.76■□□□□ 0.59
STRA6-210ENST00000569936 FRAT2O75474 233 aaPredicted RBP18.76■□□□□ 0.59
STRA6-210ENST00000569936 GOLGA2Q08379 1002 aa18.76■□□□□ 0.59
STRA6-210ENST00000569936 USP19O94966 1318 aa18.76■□□□□ 0.59
STRA6-210ENST00000569936 GCP02774 474 aa18.75■□□□□ 0.59
STRA6-210ENST00000569936 U2AF1L5P0DN76 240 aaPredicted RBP18.75■□□□□ 0.59
STRA6-210ENST00000569936 U2AF1Q01081 240 aaKnown RBP eCLIP18.75■□□□□ 0.59
STRA6-210ENST00000569936 FLT4P35916 1363 aa18.74■□□□□ 0.59
STRA6-210ENST00000569936 MED1Q15648 1581 aaPredicted RBP18.74■□□□□ 0.59
STRA6-210ENST00000569936 CCDC146Q8IYE0 955 aa18.74■□□□□ 0.59
STRA6-210ENST00000569936 TRMT2AQ8IZ69 625 aaKnown RBP18.74■□□□□ 0.59
STRA6-210ENST00000569936 ZBTB7CA1YPR0 619 aa18.73■□□□□ 0.59
STRA6-210ENST00000569936 PIP4K2BP78356 416 aa18.73■□□□□ 0.59
STRA6-210ENST00000569936 SLFN5Q08AF3 891 aa18.73■□□□□ 0.59
STRA6-210ENST00000569936 HSP90AB2PQ58FF8 381 aa18.73■□□□□ 0.59
STRA6-210ENST00000569936 PHRF1Q9P1Y6 1649 aaKnown RBP18.73■□□□□ 0.59
STRA6-210ENST00000569936 IQSEC2Q5JU85 1478 aa18.72■□□□□ 0.59
STRA6-210ENST00000569936 UBAP1LF5GYI3 381 aa18.72■□□□□ 0.59
STRA6-210ENST00000569936 IL13P35225 146 aa18.72■□□□□ 0.59
STRA6-210ENST00000569936 RSPH6AQ9H0K4 717 aa18.72■□□□□ 0.59
STRA6-210ENST00000569936 KIF24Q5T7B8 1368 aa18.72■□□□□ 0.59
STRA6-210ENST00000569936 AHDC1Q5TGY3 1603 aaPredicted RBP18.72■□□□□ 0.59
STRA6-210ENST00000569936 CABLES1Q8TDN4 633 aa18.71■□□□□ 0.59
STRA6-210ENST00000569936 CRYBG1Q9Y4K1 1723 aa18.71■□□□□ 0.59
STRA6-210ENST00000569936 CERKQ8TCT0 537 aa18.71■□□□□ 0.59
STRA6-210ENST00000569936 HOXC9P31274 260 aa18.7■□□□□ 0.58
STRA6-210ENST00000569936 EIF4A2Q14240 407 aaKnown RBP18.7■□□□□ 0.58
STRA6-210ENST00000569936 RTL1A6NKG5 1358 aa18.69■□□□□ 0.58
STRA6-210ENST00000569936 PHLPP1O60346 1717 aa18.69■□□□□ 0.58
STRA6-210ENST00000569936 ARHGEF25Q86VW2 580 aa18.68■□□□□ 0.58
STRA6-210ENST00000569936 RGS3P49796 1198 aa18.68■□□□□ 0.58
STRA6-210ENST00000569936 ZC3H6P61129 1189 aaKnown RBP18.68■□□□□ 0.58
STRA6-210ENST00000569936 IP6K1Q92551 441 aa18.67■□□□□ 0.58
STRA6-210ENST00000569936 LRRC59Q96AG4 307 aaKnown RBP18.67■□□□□ 0.58
STRA6-210ENST00000569936 RUNDC1Q96C34 613 aa18.67■□□□□ 0.58
STRA6-210ENST00000569936 HAP1P54257 671 aaPredicted RBP18.66■□□□□ 0.58
STRA6-210ENST00000569936 ABCA3Q99758 1704 aa18.66■□□□□ 0.58
STRA6-210ENST00000569936 RGPD5Q99666 1765 aa18.65■□□□□ 0.58
STRA6-210ENST00000569936 APAF1O14727 1248 aa18.65■□□□□ 0.58
STRA6-210ENST00000569936 HMOX1P09601 288 aa18.65■□□□□ 0.58
STRA6-210ENST00000569936 PNNQ9H307 717 aaKnown RBP18.65■□□□□ 0.58
STRA6-210ENST00000569936 FCHSD2O94868 740 aa18.65■□□□□ 0.58
STRA6-210ENST00000569936 LTV1Q96GA3 475 aaPredicted RBP18.65■□□□□ 0.58
STRA6-210ENST00000569936 RGPD1P0DJD0 1748 aa18.64■□□□□ 0.58
STRA6-210ENST00000569936 MAPK8IP3Q9UPT6 1336 aa18.64■□□□□ 0.57
STRA6-210ENST00000569936 BECN1Q14457 450 aa18.63■□□□□ 0.57
STRA6-210ENST00000569936 COL16A1Q07092 1604 aaPredicted RBP18.63■□□□□ 0.57
STRA6-210ENST00000569936 NGEFQ8N5V2 710 aa18.62■□□□□ 0.57
STRA6-210ENST00000569936 PRKAR2BP31323 418 aa18.62■□□□□ 0.57
STRA6-210ENST00000569936 TCP11L2Q8N4U5 519 aa18.62■□□□□ 0.57
STRA6-210ENST00000569936 PLEKHF1Q96S99 279 aa18.62■□□□□ 0.57
STRA6-210ENST00000569936 PDE3AQ14432 1141 aa18.61■□□□□ 0.57
STRA6-210ENST00000569936 SULT6B1Q6IMI4 303 aa18.61■□□□□ 0.57
STRA6-210ENST00000569936 KIAA0232Q92628 1395 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms