RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 TMC2Q8TDI7 906 aa13.72□□□□□ -0.21
GDE1-205ENST00000569899 DDX27Q96GQ7 796 aaKnown RBP13.72□□□□□ -0.21
GDE1-205ENST00000569899 CDK19Q9BWU1 502 aa13.72□□□□□ -0.21
GDE1-205ENST00000569899 NKTRP30414 1462 aaKnown RBP13.71□□□□□ -0.21
GDE1-205ENST00000569899 CDC42BPGQ6DT37 1551 aa13.71□□□□□ -0.21
GDE1-205ENST00000569899 AKAP12Q02952 1782 aa13.71□□□□□ -0.21
GDE1-205ENST00000569899 C3orf67Q6ZVT6 689 aa13.71□□□□□ -0.22
GDE1-205ENST00000569899 PUS7Q96PZ0 661 aaKnown RBP13.71□□□□□ -0.22
GDE1-205ENST00000569899 C2orf72A6NCS6 295 aa13.7□□□□□ -0.22
GDE1-205ENST00000569899 KIF3CO14782 793 aa13.7□□□□□ -0.22
GDE1-205ENST00000569899 MON2Q7Z3U7 1717 aa13.7□□□□□ -0.22
GDE1-205ENST00000569899 CD163L1Q9NR16 1453 aa13.69□□□□□ -0.22
GDE1-205ENST00000569899 KIF20BQ96Q89 1820 aa13.69□□□□□ -0.22
GDE1-205ENST00000569899 NINLQ9Y2I6 1382 aa13.69□□□□□ -0.22
GDE1-205ENST00000569899 WASLO00401 505 aaPredicted RBP13.69□□□□□ -0.22
GDE1-205ENST00000569899 PER1O15534 1290 aaPredicted RBP13.69□□□□□ -0.22
GDE1-205ENST00000569899 CNGB1Q14028 1251 aaPredicted RBP13.69□□□□□ -0.22
GDE1-205ENST00000569899 TMC1Q8TDI8 760 aa13.69□□□□□ -0.22
GDE1-205ENST00000569899 XIRP1Q702N8 1843 aaKnown RBP13.69□□□□□ -0.22
GDE1-205ENST00000569899 SLC12A5Q9H2X9 1139 aa13.68□□□□□ -0.22
GDE1-205ENST00000569899 PRKRIP1Q9H875 184 aaPredicted RBP13.68□□□□□ -0.22
GDE1-205ENST00000569899 ANKRD36BQ8N2N9 1353 aa13.68□□□□□ -0.22
GDE1-205ENST00000569899 DSG2Q14126 1118 aa13.68□□□□□ -0.22
GDE1-205ENST00000569899 NSD3Q9BZ95 1437 aa13.68□□□□□ -0.22
GDE1-205ENST00000569899 ADGRL3Q9HAR2 1447 aa13.68□□□□□ -0.22
GDE1-205ENST00000569899 ANKRD26Q9UPS8 1709 aa13.67□□□□□ -0.22
GDE1-205ENST00000569899 A0A1W2PP64 1363 aa13.67□□□□□ -0.22
GDE1-205ENST00000569899 PPIP5K1Q6PFW1 1433 aa13.67□□□□□ -0.22
GDE1-205ENST00000569899 PPP1R15BQ5SWA1 713 aa13.67□□□□□ -0.22
GDE1-205ENST00000569899 PRR36Q9H6K5 1346 aa13.67□□□□□ -0.22
GDE1-205ENST00000569899 NRKQ7Z2Y5 1582 aa13.66□□□□□ -0.22
GDE1-205ENST00000569899 KTN1Q86UP2 1357 aaKnown RBP13.66□□□□□ -0.22
GDE1-205ENST00000569899 E2F4Q16254 413 aa13.65□□□□□ -0.22
GDE1-205ENST00000569899 KCNV2Q8TDN2 545 aa13.65□□□□□ -0.22
GDE1-205ENST00000569899 RBM33Q96EV2 1170 aaKnown RBP13.65□□□□□ -0.22
GDE1-205ENST00000569899 FOXK1P85037 733 aa13.64□□□□□ -0.23
GDE1-205ENST00000569899 CARD14Q9BXL6 1004 aa13.64□□□□□ -0.23
GDE1-205ENST00000569899 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.64□□□□□ -0.23
GDE1-205ENST00000569899 PARD3Q8TEW0 1356 aa13.64□□□□□ -0.23
GDE1-205ENST00000569899 CC2D1BQ5T0F9 858 aaKnown RBP13.64□□□□□ -0.23
GDE1-205ENST00000569899 NUDT16Q96DE0 195 aaKnown RBP13.64□□□□□ -0.23
GDE1-205ENST00000569899 KNSTRNQ9Y448 316 aa13.64□□□□□ -0.23
GDE1-205ENST00000569899 NUTM2FA1L443 756 aa13.62□□□□□ -0.23
GDE1-205ENST00000569899 CCER2I3L3R5 266 aa13.62□□□□□ -0.23
GDE1-205ENST00000569899 CABP1Q9NZU7 370 aa13.62□□□□□ -0.23
GDE1-205ENST00000569899 ANKARQ7Z5J8 1434 aa13.62□□□□□ -0.23
GDE1-205ENST00000569899 NPC1L1Q9UHC9 1359 aa13.61□□□□□ -0.23
GDE1-205ENST00000569899 CPSF1Q10570 1443 aaKnown RBP13.61□□□□□ -0.23
GDE1-205ENST00000569899 CAMK2BQ13554 666 aa13.61□□□□□ -0.23
GDE1-205ENST00000569899 PLPP6Q8IY26 295 aa13.61□□□□□ -0.23
GDE1-205ENST00000569899 PROSER2Q86WR7 435 aaPredicted RBP13.6□□□□□ -0.23
GDE1-205ENST00000569899 TMEM94Q12767 1356 aa13.59□□□□□ -0.23
GDE1-205ENST00000569899 ZNF335Q9H4Z2 1342 aaPredicted RBP13.59□□□□□ -0.23
GDE1-205ENST00000569899 CCDC184Q52MB2 194 aa13.59□□□□□ -0.23
GDE1-205ENST00000569899 TERF2IPQ9NYB0 399 aa13.59□□□□□ -0.23
GDE1-205ENST00000569899 MYBBP1AQ9BQG0 1328 aaKnown RBP13.58□□□□□ -0.24
GDE1-205ENST00000569899 RALBP1Q15311 655 aa13.58□□□□□ -0.24
GDE1-205ENST00000569899 HDGFL2Q7Z4V5 671 aaPredicted RBP13.58□□□□□ -0.24
GDE1-205ENST00000569899 C14orf37Q86TY3 774 aa13.58□□□□□ -0.24
GDE1-205ENST00000569899 LRRC7Q96NW7 1537 aa13.58□□□□□ -0.24
GDE1-205ENST00000569899 EDC4Q6P2E9 1401 aaKnown RBP13.57□□□□□ -0.24
GDE1-205ENST00000569899 CGNL1Q0VF96 1302 aa13.57□□□□□ -0.24
GDE1-205ENST00000569899 KIF1AQ12756 1690 aa13.56□□□□□ -0.24
GDE1-205ENST00000569899 NSD2O96028 1365 aa13.56□□□□□ -0.24
GDE1-205ENST00000569899 DCCP43146 1447 aa13.56□□□□□ -0.24
GDE1-205ENST00000569899 MRS2Q9HD23 443 aa13.55□□□□□ -0.24
GDE1-205ENST00000569899 USP6P35125 1406 aa13.55□□□□□ -0.24
GDE1-205ENST00000569899 NCOA3Q9Y6Q9 1424 aa13.55□□□□□ -0.24
GDE1-205ENST00000569899 PIK3C2AO00443 1686 aa13.55□□□□□ -0.24
GDE1-205ENST00000569899 ACEP12821 1306 aa13.54□□□□□ -0.24
GDE1-205ENST00000569899 PLEKHG3A1L390 1219 aa13.54□□□□□ -0.24
GDE1-205ENST00000569899 MAMSTRQ6ZN01 415 aa13.54□□□□□ -0.24
GDE1-205ENST00000569899 YTHDC1Q96MU7 727 aaKnown RBP13.54□□□□□ -0.24
GDE1-205ENST00000569899 SCUBE2Q9NQ36 999 aa13.54□□□□□ -0.24
GDE1-205ENST00000569899 POLR3AO14802 1390 aaPredicted RBP13.54□□□□□ -0.24
GDE1-205ENST00000569899 MARF1Q9Y4F3 1742 aaKnown RBP13.54□□□□□ -0.24
GDE1-205ENST00000569899 PMFBP1Q8TBY8 1022 aa13.53□□□□□ -0.24
GDE1-205ENST00000569899 ARHGEF1Q92888 912 aaKnown RBP13.53□□□□□ -0.24
GDE1-205ENST00000569899 EMILIN3Q9NT22 766 aa13.53□□□□□ -0.24
GDE1-205ENST00000569899 BRD4O60885 1362 aaPredicted RBP13.53□□□□□ -0.24
GDE1-205ENST00000569899 MST1RQ04912 1400 aa13.53□□□□□ -0.24
GDE1-205ENST00000569899 NLRP13Q86W25 1043 aa13.52□□□□□ -0.25
GDE1-205ENST00000569899 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.52□□□□□ -0.25
GDE1-205ENST00000569899 C1orf167Q5SNV9 1468 aa13.52□□□□□ -0.25
GDE1-205ENST00000569899 USP54Q70EL1 1684 aa13.52□□□□□ -0.25
GDE1-205ENST00000569899 SSH2Q76I76 1423 aa13.51□□□□□ -0.25
GDE1-205ENST00000569899 TRPM3Q9HCF6 1732 aaPredicted RBP13.51□□□□□ -0.25
GDE1-205ENST00000569899 PPP2R1AP30153 589 aa13.51□□□□□ -0.25
GDE1-205ENST00000569899 GGNBP2Q9H3C7 697 aa13.51□□□□□ -0.25
GDE1-205ENST00000569899 C19orf44Q9H6X5 657 aa13.51□□□□□ -0.25
GDE1-205ENST00000569899 MSH6P52701 1360 aa13.51□□□□□ -0.25
GDE1-205ENST00000569899 LTBP4Q8N2S1 1624 aa13.51□□□□□ -0.25
GDE1-205ENST00000569899 SHPRHQ149N8 1683 aa13.5□□□□□ -0.25
GDE1-205ENST00000569899 FYB1O15117 783 aa13.5□□□□□ -0.25
GDE1-205ENST00000569899 NBR1Q14596 966 aa13.5□□□□□ -0.25
GDE1-205ENST00000569899 SLAIN1Q8ND83 568 aa13.5□□□□□ -0.25
GDE1-205ENST00000569899 MAP2P11137 1827 aaKnown RBP13.5□□□□□ -0.25
GDE1-205ENST00000569899 MORC1Q86VD1 984 aa13.5□□□□□ -0.25
GDE1-205ENST00000569899 NGDNQ8NEJ9 315 aaKnown RBP13.5□□□□□ -0.25
GDE1-205ENST00000569899 ARIH1Q9Y4X5 557 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms