RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 TMUB1Q9BVT8 246 aa9.74□□□□□ -0.85
LINC00556-201ENST00000569603 ESF1Q9H501 851 aaKnown RBP9.74□□□□□ -0.85
LINC00556-201ENST00000569603 PDZRN3Q9UPQ7 1066 aa9.74□□□□□ -0.85
LINC00556-201ENST00000569603 ACTN4O43707 911 aaKnown RBP9.73□□□□□ -0.85
LINC00556-201ENST00000569603 FCHSD2O94868 740 aa9.73□□□□□ -0.85
LINC00556-201ENST00000569603 KANK4Q5T7N3 995 aaPredicted RBP9.73□□□□□ -0.85
LINC00556-201ENST00000569603 GGT6Q6P531 493 aa9.73□□□□□ -0.85
LINC00556-201ENST00000569603 HOMEZQ8IX15 550 aa9.73□□□□□ -0.85
LINC00556-201ENST00000569603 EIF2AK4Q9P2K8 1649 aaKnown RBP9.72□□□□□ -0.85
LINC00556-201ENST00000569603 KMT5BQ4FZB7 885 aa9.72□□□□□ -0.85
LINC00556-201ENST00000569603 TRIM67Q6ZTA4 783 aa9.72□□□□□ -0.85
LINC00556-201ENST00000569603 MYOM3Q5VTT5 1437 aa9.72□□□□□ -0.85
LINC00556-201ENST00000569603 MIA2Q96PC5 1412 aa9.72□□□□□ -0.85
LINC00556-201ENST00000569603 ABCC3O15438 1527 aa9.72□□□□□ -0.85
LINC00556-201ENST00000569603 POLR1AO95602 1720 aaPredicted RBP9.71□□□□□ -0.85
LINC00556-201ENST00000569603 PXYLP1Q8TE99 480 aa9.71□□□□□ -0.86
LINC00556-201ENST00000569603 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.7□□□□□ -0.86
LINC00556-201ENST00000569603 PPEF1O14829 653 aaPredicted RBP9.7□□□□□ -0.86
LINC00556-201ENST00000569603 KIF3BO15066 747 aa9.7□□□□□ -0.86
LINC00556-201ENST00000569603 S1PR4O95977 384 aa9.7□□□□□ -0.86
LINC00556-201ENST00000569603 FBXO31Q5XUX0 539 aaPredicted RBP9.7□□□□□ -0.86
LINC00556-201ENST00000569603 BCANQ96GW7 911 aa9.7□□□□□ -0.86
LINC00556-201ENST00000569603 TNRQ92752 1358 aa9.7□□□□□ -0.86
LINC00556-201ENST00000569603 SPATA31D1Q6ZQQ2 1576 aa9.7□□□□□ -0.86
LINC00556-201ENST00000569603 CROCC2H7BZ55 1655 aa9.7□□□□□ -0.86
LINC00556-201ENST00000569603 ZC3H13Q5T200 1668 aaKnown RBP9.7□□□□□ -0.86
LINC00556-201ENST00000569603 NLRP1Q9C000 1473 aa9.69□□□□□ -0.86
LINC00556-201ENST00000569603 ZNF335Q9H4Z2 1342 aaPredicted RBP9.69□□□□□ -0.86
LINC00556-201ENST00000569603 SHANK2Q9UPX8 1470 aa9.69□□□□□ -0.86
LINC00556-201ENST00000569603 DEPDC5O75140 1603 aa9.68□□□□□ -0.86
LINC00556-201ENST00000569603 MED14O60244 1454 aa9.68□□□□□ -0.86
LINC00556-201ENST00000569603 SLC19A1P41440 591 aa9.68□□□□□ -0.86
LINC00556-201ENST00000569603 VWDEQ8N2E2 1590 aa9.67□□□□□ -0.86
LINC00556-201ENST00000569603 PRDM15P57071 1507 aaPredicted RBP9.67□□□□□ -0.86
LINC00556-201ENST00000569603 ABCC5O15440 1437 aa9.67□□□□□ -0.86
LINC00556-201ENST00000569603 RBM26Q5T8P6 1007 aaKnown RBP9.67□□□□□ -0.86
LINC00556-201ENST00000569603 ALKQ9UM73 1620 aa9.67□□□□□ -0.86
LINC00556-201ENST00000569603 DUOX2Q9NRD8 1548 aa9.66□□□□□ -0.86
LINC00556-201ENST00000569603 ERVK-7P63135 1459 aa9.66□□□□□ -0.86
LINC00556-201ENST00000569603 WASHC2CQ9Y4E1 1318 aa9.66□□□□□ -0.86
LINC00556-201ENST00000569603 CEP152O94986 1710 aa9.66□□□□□ -0.86
LINC00556-201ENST00000569603 TESPA1A2RU30 521 aaPredicted RBP9.66□□□□□ -0.86
LINC00556-201ENST00000569603 FECHP22830 423 aa9.66□□□□□ -0.86
LINC00556-201ENST00000569603 METTL3Q86U44 580 aaKnown RBP9.66□□□□□ -0.86
LINC00556-201ENST00000569603 ANKLE1Q8NAG6 615 aa9.66□□□□□ -0.86
LINC00556-201ENST00000569603 PTPN23Q9H3S7 1636 aa9.65□□□□□ -0.86
LINC00556-201ENST00000569603 GPR37O15354 613 aa9.65□□□□□ -0.86
LINC00556-201ENST00000569603 ADH1BP00325 375 aa9.65□□□□□ -0.86
LINC00556-201ENST00000569603 HIC1Q14526 733 aa9.65□□□□□ -0.86
LINC00556-201ENST00000569603 SPRYD7Q5W111 196 aa9.65□□□□□ -0.86
LINC00556-201ENST00000569603 LIAT1Q6ZQX7 453 aa9.65□□□□□ -0.86
LINC00556-201ENST00000569603 UGGT1Q9NYU2 1555 aa9.65□□□□□ -0.86
LINC00556-201ENST00000569603 STRCP1A6NGW2 1772 aa9.65□□□□□ -0.87
LINC00556-201ENST00000569603 ARHGAP31Q2M1Z3 1444 aa9.65□□□□□ -0.87
LINC00556-201ENST00000569603 TULP1O00294 542 aaPredicted RBP9.64□□□□□ -0.87
LINC00556-201ENST00000569603 OATP04181 439 aa9.64□□□□□ -0.87
LINC00556-201ENST00000569603 TSPY4P0CV99 314 aa9.64□□□□□ -0.87
LINC00556-201ENST00000569603 TSPY10P0CW01 314 aa9.64□□□□□ -0.87
LINC00556-201ENST00000569603 PUS10Q3MIT2 529 aaKnown RBP9.64□□□□□ -0.87
LINC00556-201ENST00000569603 UBR1Q8IWV7 1749 aa9.64□□□□□ -0.87
LINC00556-201ENST00000569603 FGD6Q6ZV73 1430 aa9.64□□□□□ -0.87
LINC00556-201ENST00000569603 ERBINQ96RT1 1412 aa9.64□□□□□ -0.87
LINC00556-201ENST00000569603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.63□□□□□ -0.87
LINC00556-201ENST00000569603 CPS1P31327 1500 aa9.63□□□□□ -0.87
LINC00556-201ENST00000569603 CFAP65Q6ZU64 1925 aaKnown RBP9.63□□□□□ -0.87
LINC00556-201ENST00000569603 PLA2G2CQ5R387 149 aa9.63□□□□□ -0.87
LINC00556-201ENST00000569603 DAPK1P53355 1430 aa9.63□□□□□ -0.87
LINC00556-201ENST00000569603 KIF15Q9NS87 1388 aa9.63□□□□□ -0.87
LINC00556-201ENST00000569603 IQGAP1P46940 1657 aa9.62□□□□□ -0.87
LINC00556-201ENST00000569603 ARHGAP23Q9P227 1491 aa9.62□□□□□ -0.87
LINC00556-201ENST00000569603 NR1I2O75469 434 aa9.62□□□□□ -0.87
LINC00556-201ENST00000569603 ZNF598Q86UK7 904 aaKnown RBP9.62□□□□□ -0.87
LINC00556-201ENST00000569603 NLRP7Q8WX94 980 aa9.62□□□□□ -0.87
LINC00556-201ENST00000569603 SLIT1O75093 1534 aa9.61□□□□□ -0.87
LINC00556-201ENST00000569603 LMTK2Q8IWU2 1503 aa9.61□□□□□ -0.87
LINC00556-201ENST00000569603 ZNF787Q6DD87 383 aa9.61□□□□□ -0.87
LINC00556-201ENST00000569603 ILDR2Q71H61 639 aa9.61□□□□□ -0.87
LINC00556-201ENST00000569603 SCUBE3Q8IX30 993 aa9.61□□□□□ -0.87
LINC00556-201ENST00000569603 NPHP4O75161 1426 aaPredicted RBP9.61□□□□□ -0.87
LINC00556-201ENST00000569603 ADGRL2O95490 1459 aa9.6□□□□□ -0.87
LINC00556-201ENST00000569603 GNPATO15228 680 aa9.6□□□□□ -0.87
LINC00556-201ENST00000569603 ZNF697Q5TEC3 545 aa9.6□□□□□ -0.87
LINC00556-201ENST00000569603 THEMISQ8N1K5 641 aaPredicted RBP9.6□□□□□ -0.87
LINC00556-201ENST00000569603 SLC6A16Q9GZN6 736 aa9.6□□□□□ -0.87
LINC00556-201ENST00000569603 KDM5AP29375 1690 aaKnown RBP9.6□□□□□ -0.87
LINC00556-201ENST00000569603 ANKLE2Q86XL3 938 aa9.59□□□□□ -0.87
LINC00556-201ENST00000569603 PRR20EP86478 221 aa9.58□□□□□ -0.88
LINC00556-201ENST00000569603 PRR20CP86479 221 aa9.58□□□□□ -0.88
LINC00556-201ENST00000569603 PRR20DP86480 221 aa9.58□□□□□ -0.88
LINC00556-201ENST00000569603 PRR20BP86481 221 aa9.58□□□□□ -0.88
LINC00556-201ENST00000569603 PRR20AP86496 221 aa9.58□□□□□ -0.88
LINC00556-201ENST00000569603 PLCB2Q00722 1185 aa9.58□□□□□ -0.88
LINC00556-201ENST00000569603 SYNMO15061 1565 aa9.58□□□□□ -0.88
LINC00556-201ENST00000569603 NOS1P29475 1434 aa9.57□□□□□ -0.88
LINC00556-201ENST00000569603 LRRC7Q96NW7 1537 aa9.57□□□□□ -0.88
LINC00556-201ENST00000569603 PIK3C2BO00750 1634 aa9.57□□□□□ -0.88
LINC00556-201ENST00000569603 XIRP1Q702N8 1843 aaKnown RBP9.57□□□□□ -0.88
LINC00556-201ENST00000569603 UBAP1LF5GYI3 381 aa9.57□□□□□ -0.88
LINC00556-201ENST00000569603 TNFRSF10AO00220 468 aa9.57□□□□□ -0.88
LINC00556-201ENST00000569603 GDF9O60383 454 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms