RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 FOXO3O43524 673 aa29.53■■■□□ 2.32
VCPKMT-205ENST00000569518 HSP90AB2PQ58FF8 381 aa29.53■■■□□ 2.32
VCPKMT-205ENST00000569518 HMOX1P09601 288 aa29.52■■■□□ 2.32
VCPKMT-205ENST00000569518 TRIM35Q9UPQ4 493 aa29.51■■■□□ 2.31
VCPKMT-205ENST00000569518 MSH6P52701 1360 aa29.51■■■□□ 2.31
VCPKMT-205ENST00000569518 CADPS2Q86UW7 1296 aa29.5■■■□□ 2.31
VCPKMT-205ENST00000569518 LTN1O94822 1766 aa29.49■■■□□ 2.31
VCPKMT-205ENST00000569518 ZNF335Q9H4Z2 1342 aaPredicted RBP29.49■■■□□ 2.31
VCPKMT-205ENST00000569518 PHACTR3Q96KR7 559 aa29.48■■■□□ 2.31
VCPKMT-205ENST00000569518 SLIT3O75094 1523 aa29.47■■■□□ 2.31
VCPKMT-205ENST00000569518 ALS2Q96Q42 1657 aa29.47■■■□□ 2.31
VCPKMT-205ENST00000569518 PHRF1Q9P1Y6 1649 aaKnown RBP29.47■■■□□ 2.31
VCPKMT-205ENST00000569518 RTL1A6NKG5 1358 aa29.46■■■□□ 2.31
VCPKMT-205ENST00000569518 RIPK4P57078 832 aa29.45■■■□□ 2.31
VCPKMT-205ENST00000569518 XPCQ01831 940 aaPredicted RBP29.45■■■□□ 2.31
VCPKMT-205ENST00000569518 ARHGEF10O15013 1369 aa29.45■■■□□ 2.3
VCPKMT-205ENST00000569518 NEFMP07197 916 aa29.45■■■□□ 2.3
VCPKMT-205ENST00000569518 AMPHP49418 695 aa29.45■■■□□ 2.3
VCPKMT-205ENST00000569518 KRT28Q7Z3Y7 464 aa29.45■■■□□ 2.3
VCPKMT-205ENST00000569518 NFE2L2Q16236 605 aa29.44■■■□□ 2.3
VCPKMT-205ENST00000569518 HOXC9P31274 260 aa29.43■■■□□ 2.3
VCPKMT-205ENST00000569518 DLG5Q8TDM6 1919 aa29.42■■■□□ 2.3
VCPKMT-205ENST00000569518 AEBP1Q8IUX7 1158 aa29.42■■■□□ 2.3
VCPKMT-205ENST00000569518 PPP4R2Q9NY27 417 aa29.42■■■□□ 2.3
VCPKMT-205ENST00000569518 IL16Q14005 1332 aa29.42■■■□□ 2.3
VCPKMT-205ENST00000569518 USP19O94966 1318 aa29.41■■■□□ 2.3
VCPKMT-205ENST00000569518 SULT6B1Q6IMI4 303 aa29.4■■■□□ 2.3
VCPKMT-205ENST00000569518 KCNH5Q8NCM2 988 aa29.4■■■□□ 2.3
VCPKMT-205ENST00000569518 MYH16Q9H6N6 1097 aa29.4■■■□□ 2.3
VCPKMT-205ENST00000569518 KDRP35968 1356 aa29.4■■■□□ 2.3
VCPKMT-205ENST00000569518 IGSF1Q8N6C5 1336 aa29.38■■■□□ 2.29
VCPKMT-205ENST00000569518 PXDNQ92626 1479 aa29.36■■■□□ 2.29
VCPKMT-205ENST00000569518 NPHP3Q7Z494 1330 aa29.35■■■□□ 2.29
VCPKMT-205ENST00000569518 FANCIQ9NVI1 1328 aa29.34■■■□□ 2.29
VCPKMT-205ENST00000569518 IP6K1Q92551 441 aa29.34■■■□□ 2.29
VCPKMT-205ENST00000569518 EYA1Q99502 592 aa29.34■■■□□ 2.29
VCPKMT-205ENST00000569518 MED1Q15648 1581 aaPredicted RBP29.33■■■□□ 2.29
VCPKMT-205ENST00000569518 GCP02774 474 aa29.33■■■□□ 2.29
VCPKMT-205ENST00000569518 PLIN1O60240 522 aa29.32■■■□□ 2.28
VCPKMT-205ENST00000569518 DDX17Q92841 729 aaKnown RBP29.31■■■□□ 2.28
VCPKMT-205ENST00000569518 BRINP3Q76B58 766 aa29.29■■■□□ 2.28
VCPKMT-205ENST00000569518 ARHGEF25Q86VW2 580 aa29.29■■■□□ 2.28
VCPKMT-205ENST00000569518 TNS3Q68CZ2 1445 aa29.29■■■□□ 2.28
VCPKMT-205ENST00000569518 LMOD3Q0VAK6 560 aa29.29■■■□□ 2.28
VCPKMT-205ENST00000569518 LMOD2Q6P5Q4 547 aa29.29■■■□□ 2.28
VCPKMT-205ENST00000569518 TSR2Q969E8 191 aaKnown RBP29.28■■■□□ 2.28
VCPKMT-205ENST00000569518 CRYBG1Q9Y4K1 1723 aa29.27■■■□□ 2.28
VCPKMT-205ENST00000569518 BCAR3O75815 825 aa29.26■■■□□ 2.27
VCPKMT-205ENST00000569518 CALD1Q05682 793 aaKnown RBP29.26■■■□□ 2.27
VCPKMT-205ENST00000569518 CT47B1P0C2W7 299 aaPredicted RBP29.25■■■□□ 2.27
VCPKMT-205ENST00000569518 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.25■■■□□ 2.27
VCPKMT-205ENST00000569518 SLAIN2Q9P270 581 aa29.25■■■□□ 2.27
VCPKMT-205ENST00000569518 EXOC6Q8TAG9 804 aa29.24■■■□□ 2.27
VCPKMT-205ENST00000569518 RARSP54136 660 aaKnown RBP29.24■■■□□ 2.27
VCPKMT-205ENST00000569518 THUMPD2Q9BTF0 503 aaKnown RBP29.24■■■□□ 2.27
VCPKMT-205ENST00000569518 SPATA31A3Q5VYP0 1347 aa29.23■■■□□ 2.27
VCPKMT-205ENST00000569518 C20orf194Q5TEA3 1177 aa29.22■■■□□ 2.27
VCPKMT-205ENST00000569518 ZNF853P0CG23 659 aa29.22■■■□□ 2.27
VCPKMT-205ENST00000569518 B4GALNT3Q6L9W6 998 aa29.22■■■□□ 2.27
VCPKMT-205ENST00000569518 LTV1Q96GA3 475 aaPredicted RBP29.22■■■□□ 2.27
VCPKMT-205ENST00000569518 EXOSC9Q06265 439 aaKnown RBP29.21■■■□□ 2.27
VCPKMT-205ENST00000569518 IFT57Q9NWB7 429 aa29.21■■■□□ 2.27
VCPKMT-205ENST00000569518 RGPD2P0DJD1 1756 aa29.2■■■□□ 2.27
VCPKMT-205ENST00000569518 FAM83GA6ND36 823 aa29.2■■■□□ 2.26
VCPKMT-205ENST00000569518 CAMTA1Q9Y6Y1 1673 aa29.2■■■□□ 2.26
VCPKMT-205ENST00000569518 NCAPD2Q15021 1401 aa29.19■■■□□ 2.26
VCPKMT-205ENST00000569518 PELP1Q8IZL8 1130 aaKnown RBP29.18■■■□□ 2.26
VCPKMT-205ENST00000569518 CRBNQ96SW2 442 aa29.18■■■□□ 2.26
VCPKMT-205ENST00000569518 GNAI1P63096 354 aa29.17■■■□□ 2.26
VCPKMT-205ENST00000569518 MTHFSDQ2M296 383 aaKnown RBP29.17■■■□□ 2.26
VCPKMT-205ENST00000569518 SOS2Q07890 1332 aaPredicted RBP29.17■■■□□ 2.26
VCPKMT-205ENST00000569518 NHSL1Q5SYE7 1610 aa29.17■■■□□ 2.26
VCPKMT-205ENST00000569518 ZBTB7CA1YPR0 619 aa29.16■■■□□ 2.26
VCPKMT-205ENST00000569518 COL18A1P39060 1754 aa29.16■■■□□ 2.26
VCPKMT-205ENST00000569518 RGPD5Q99666 1765 aa29.16■■■□□ 2.26
VCPKMT-205ENST00000569518 PLEKHG5O94827 1062 aa29.15■■■□□ 2.26
VCPKMT-205ENST00000569518 NBPF6Q5VWK0 638 aa29.15■■■□□ 2.26
VCPKMT-205ENST00000569518 NBPF4Q96M43 638 aa29.15■■■□□ 2.26
VCPKMT-205ENST00000569518 CFAP44Q96MT7 982 aa29.15■■■□□ 2.26
VCPKMT-205ENST00000569518 ABCC6O95255 1503 aa29.15■■■□□ 2.26
VCPKMT-205ENST00000569518 DCTN1Q14203 1278 aa29.15■■■□□ 2.26
VCPKMT-205ENST00000569518 GAS2L2Q8NHY3 880 aa29.14■■■□□ 2.26
VCPKMT-205ENST00000569518 MBIPQ9NS73 344 aa29.13■■■□□ 2.25
VCPKMT-205ENST00000569518 AXIN2Q9Y2T1 843 aa29.13■■■□□ 2.25
VCPKMT-205ENST00000569518 LRRC37A3O60309 1634 aa29.12■■■□□ 2.25
VCPKMT-205ENST00000569518 LTBP4Q8N2S1 1624 aa29.12■■■□□ 2.25
VCPKMT-205ENST00000569518 LMO7Q8WWI1 1683 aa29.12■■■□□ 2.25
VCPKMT-205ENST00000569518 USHBP1Q8N6Y0 703 aa29.12■■■□□ 2.25
VCPKMT-205ENST00000569518 CCDC136Q96JN2 1154 aa29.12■■■□□ 2.25
VCPKMT-205ENST00000569518 LAS1LQ9Y4W2 734 aaKnown RBP29.11■■■□□ 2.25
VCPKMT-205ENST00000569518 CRB1P82279 1406 aa29.11■■■□□ 2.25
VCPKMT-205ENST00000569518 PDE3AQ14432 1141 aa29.1■■■□□ 2.25
VCPKMT-205ENST00000569518 ZC3H6P61129 1189 aaKnown RBP29.1■■■□□ 2.25
VCPKMT-205ENST00000569518 MCM10Q7L590 875 aa29.1■■■□□ 2.25
VCPKMT-205ENST00000569518 ANKRD24Q8TF21 1146 aa29.1■■■□□ 2.25
VCPKMT-205ENST00000569518 LRRC59Q96AG4 307 aaKnown RBP29.09■■■□□ 2.25
VCPKMT-205ENST00000569518 CPDO75976 1380 aa29.09■■■□□ 2.25
VCPKMT-205ENST00000569518 CABLES1Q8TDN4 633 aa29.08■■■□□ 2.25
VCPKMT-205ENST00000569518 HTATSF1O43719 755 aaKnown RBP29.08■■■□□ 2.25
VCPKMT-205ENST00000569518 BCL2L13Q9BXK5 485 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms