RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 PDE3BQ13370 1112 aa10.11□□□□□ -0.79
CDH13-214ENST00000569455 ABTB2Q8N961 1025 aa10.11□□□□□ -0.79
CDH13-214ENST00000569455 PNNQ9H307 717 aaKnown RBP10.11□□□□□ -0.79
CDH13-214ENST00000569455 MARF1Q9Y4F3 1742 aaKnown RBP10.1□□□□□ -0.79
CDH13-214ENST00000569455 PPM1GO15355 546 aaPredicted RBP10.1□□□□□ -0.79
CDH13-214ENST00000569455 U2AF1L5P0DN76 240 aaPredicted RBP10.1□□□□□ -0.79
CDH13-214ENST00000569455 U2AF1Q01081 240 aaKnown RBP eCLIP10.1□□□□□ -0.79
CDH13-214ENST00000569455 XPCQ01831 940 aaPredicted RBP10.1□□□□□ -0.79
CDH13-214ENST00000569455 TRPC5Q9UL62 973 aaPredicted RBP10.1□□□□□ -0.79
CDH13-214ENST00000569455 U2SURPO15042 1029 aaKnown RBP10.09□□□□□ -0.79
CDH13-214ENST00000569455 RUNDC1Q96C34 613 aa10.09□□□□□ -0.79
CDH13-214ENST00000569455 EMILIN1Q9Y6C2 1016 aa10.09□□□□□ -0.79
CDH13-214ENST00000569455 RRS1Q15050 365 aaKnown RBP10.08□□□□□ -0.8
CDH13-214ENST00000569455 CCDC146Q8IYE0 955 aa10.08□□□□□ -0.8
CDH13-214ENST00000569455 USP21Q9UK80 565 aa10.08□□□□□ -0.8
CDH13-214ENST00000569455 KIF24Q5T7B8 1368 aa10.08□□□□□ -0.8
CDH13-214ENST00000569455 ATRNO75882 1429 aa10.07□□□□□ -0.8
CDH13-214ENST00000569455 LTN1O94822 1766 aa10.07□□□□□ -0.8
CDH13-214ENST00000569455 ADAMTS2O95450 1211 aa10.07□□□□□ -0.8
CDH13-214ENST00000569455 NEFMP07197 916 aa10.07□□□□□ -0.8
CDH13-214ENST00000569455 FBLN1P23142 703 aa10.07□□□□□ -0.8
CDH13-214ENST00000569455 LMOD2Q6P5Q4 547 aa10.07□□□□□ -0.8
CDH13-214ENST00000569455 KCNH5Q8NCM2 988 aa10.07□□□□□ -0.8
CDH13-214ENST00000569455 PEAK1Q9H792 1746 aa10.07□□□□□ -0.8
CDH13-214ENST00000569455 CRYBG1Q9Y4K1 1723 aa10.07□□□□□ -0.8
CDH13-214ENST00000569455 USP19O94966 1318 aa10.07□□□□□ -0.8
CDH13-214ENST00000569455 FLT4P35916 1363 aa10.06□□□□□ -0.8
CDH13-214ENST00000569455 APAF1O14727 1248 aa10.06□□□□□ -0.8
CDH13-214ENST00000569455 SOX12O15370 315 aa10.06□□□□□ -0.8
CDH13-214ENST00000569455 NCBP3Q53F19 620 aaKnown RBP10.06□□□□□ -0.8
CDH13-214ENST00000569455 IFFO2Q5TF58 517 aa10.06□□□□□ -0.8
CDH13-214ENST00000569455 SALL2Q9Y467 1007 aaPredicted RBP10.06□□□□□ -0.8
CDH13-214ENST00000569455 ABCA3Q99758 1704 aa10.06□□□□□ -0.8
CDH13-214ENST00000569455 MAP3K19Q56UN5 1328 aa10.06□□□□□ -0.8
CDH13-214ENST00000569455 MAPK8IP3Q9UPT6 1336 aa10.06□□□□□ -0.8
CDH13-214ENST00000569455 RTL1A6NKG5 1358 aa10.05□□□□□ -0.8
CDH13-214ENST00000569455 CPDO75976 1380 aa10.05□□□□□ -0.8
CDH13-214ENST00000569455 FCHSD2O94868 740 aa10.05□□□□□ -0.8
CDH13-214ENST00000569455 YY1P25490 414 aa10.05□□□□□ -0.8
CDH13-214ENST00000569455 IL13P35225 146 aa10.05□□□□□ -0.8
CDH13-214ENST00000569455 AMPHP49418 695 aa10.05□□□□□ -0.8
CDH13-214ENST00000569455 HAP1P54257 671 aaPredicted RBP10.05□□□□□ -0.8
CDH13-214ENST00000569455 NUTM2GQ5VZR2 741 aa10.05□□□□□ -0.8
CDH13-214ENST00000569455 SLIT3O75094 1523 aa10.05□□□□□ -0.8
CDH13-214ENST00000569455 PHRF1Q9P1Y6 1649 aaKnown RBP10.04□□□□□ -0.8
CDH13-214ENST00000569455 SENP3-EIF4A1A0A087X0R7 540 aa10.04□□□□□ -0.8
CDH13-214ENST00000569455 GCP02774 474 aa10.04□□□□□ -0.8
CDH13-214ENST00000569455 FNBP4Q8N3X1 1017 aaPredicted RBP10.04□□□□□ -0.8
CDH13-214ENST00000569455 TCP11L2Q8N4U5 519 aa10.04□□□□□ -0.8
CDH13-214ENST00000569455 GTF3C3Q9Y5Q9 886 aa10.04□□□□□ -0.8
CDH13-214ENST00000569455 NWD2Q9ULI1 1742 aa10.04□□□□□ -0.8
CDH13-214ENST00000569455 BCL9LQ86UU0 1499 aa10.04□□□□□ -0.8
CDH13-214ENST00000569455 NFAT5O94916 1531 aa10.03□□□□□ -0.8
CDH13-214ENST00000569455 ABCC6O95255 1503 aa10.03□□□□□ -0.8
CDH13-214ENST00000569455 NEFLP07196 543 aa10.03□□□□□ -0.8
CDH13-214ENST00000569455 RGPD1P0DJD0 1748 aa10.03□□□□□ -0.8
CDH13-214ENST00000569455 GOLGA2Q08379 1002 aa10.03□□□□□ -0.8
CDH13-214ENST00000569455 DEFB132Q7Z7B7 95 aa10.03□□□□□ -0.8
CDH13-214ENST00000569455 COL14A1Q05707 1796 aaKnown RBP10.03□□□□□ -0.8
CDH13-214ENST00000569455 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.02□□□□□ -0.8
CDH13-214ENST00000569455 SF3B2Q13435 895 aaKnown RBP10.02□□□□□ -0.81
CDH13-214ENST00000569455 EIF4A2Q14240 407 aaKnown RBP10.02□□□□□ -0.81
CDH13-214ENST00000569455 CCDC27Q2M243 656 aa10.02□□□□□ -0.81
CDH13-214ENST00000569455 HSP90AB2PQ58FF8 381 aa10.02□□□□□ -0.81
CDH13-214ENST00000569455 ZNF521Q96K83 1311 aa10.02□□□□□ -0.81
CDH13-214ENST00000569455 PSDA5PKW4 1024 aaPredicted RBP10.01□□□□□ -0.81
CDH13-214ENST00000569455 HOXC9P31274 260 aa10.01□□□□□ -0.81
CDH13-214ENST00000569455 PRKAR2BP31323 418 aa10.01□□□□□ -0.81
CDH13-214ENST00000569455 CABLES1Q8TDN4 633 aa10.01□□□□□ -0.81
CDH13-214ENST00000569455 PLEKHF1Q96S99 279 aa10.01□□□□□ -0.81
CDH13-214ENST00000569455 RSPH6AQ9H0K4 717 aa10.01□□□□□ -0.81
CDH13-214ENST00000569455 SLIT2O94813 1529 aa10.01□□□□□ -0.81
CDH13-214ENST00000569455 HMOX1P09601 288 aa10□□□□□ -0.81
CDH13-214ENST00000569455 NEUROD2Q15784 382 aa10□□□□□ -0.81
CDH13-214ENST00000569455 IP6K1Q92551 441 aa10□□□□□ -0.81
CDH13-214ENST00000569455 PRDM11Q9NQV5 511 aa10□□□□□ -0.81
CDH13-214ENST00000569455 BRWD3Q6RI45 1802 aa9.99□□□□□ -0.81
CDH13-214ENST00000569455 FAM83GA6ND36 823 aa9.99□□□□□ -0.81
CDH13-214ENST00000569455 E9PSI1 815 aa9.99□□□□□ -0.81
CDH13-214ENST00000569455 TMPOP42166 694 aaKnown RBP9.99□□□□□ -0.81
CDH13-214ENST00000569455 ARHGEF25Q86VW2 580 aa9.99□□□□□ -0.81
CDH13-214ENST00000569455 UNC5CLQ8IV45 518 aa9.99□□□□□ -0.81
CDH13-214ENST00000569455 WDR63Q8IWG1 891 aa9.99□□□□□ -0.81
CDH13-214ENST00000569455 WWC1Q8IX03 1113 aa9.99□□□□□ -0.81
CDH13-214ENST00000569455 CDCA7LQ96GN5 454 aa9.99□□□□□ -0.81
CDH13-214ENST00000569455 RRP7AQ9Y3A4 280 aaKnown RBP9.99□□□□□ -0.81
CDH13-214ENST00000569455 PLCH1Q4KWH8 1693 aa9.99□□□□□ -0.81
CDH13-214ENST00000569455 KIAA0232Q92628 1395 aa9.99□□□□□ -0.81
CDH13-214ENST00000569455 DLG5Q8TDM6 1919 aa9.98□□□□□ -0.81
CDH13-214ENST00000569455 ZBTB7CA1YPR0 619 aa9.98□□□□□ -0.81
CDH13-214ENST00000569455 SLFN5Q08AF3 891 aa9.98□□□□□ -0.81
CDH13-214ENST00000569455 LMOD3Q0VAK6 560 aa9.98□□□□□ -0.81
CDH13-214ENST00000569455 SULT6B1Q6IMI4 303 aa9.98□□□□□ -0.81
CDH13-214ENST00000569455 GJD4Q96KN9 370 aaPredicted RBP9.98□□□□□ -0.81
CDH13-214ENST00000569455 SUPT16HQ9Y5B9 1047 aaKnown RBP9.98□□□□□ -0.81
CDH13-214ENST00000569455 GLI3P10071 1580 aa9.97□□□□□ -0.81
CDH13-214ENST00000569455 LMO7Q8WWI1 1683 aa9.97□□□□□ -0.81
CDH13-214ENST00000569455 RIPK4P57078 832 aa9.97□□□□□ -0.81
CDH13-214ENST00000569455 NFE2L2Q16236 605 aa9.97□□□□□ -0.81
CDH13-214ENST00000569455 MYH16Q9H6N6 1097 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms