RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 NRXN3Q9Y4C0 1643 aa9.19□□□□□ -0.94
CDH13-212ENST00000569144 COL22A1Q8NFW1 1626 aaPredicted RBP9.18□□□□□ -0.94
CDH13-212ENST00000569144 GJD4Q96KN9 370 aaPredicted RBP9.18□□□□□ -0.94
CDH13-212ENST00000569144 NALCNQ8IZF0 1738 aa9.17□□□□□ -0.94
CDH13-212ENST00000569144 MYOM2P54296 1465 aa9.17□□□□□ -0.94
CDH13-212ENST00000569144 METP08581 1390 aa9.17□□□□□ -0.94
CDH13-212ENST00000569144 EMP3P54852 163 aa9.16□□□□□ -0.94
CDH13-212ENST00000569144 DEFB132Q7Z7B7 95 aa9.16□□□□□ -0.94
CDH13-212ENST00000569144 EVI5O60447 810 aa9.15□□□□□ -0.94
CDH13-212ENST00000569144 SF3B2Q13435 895 aaKnown RBP9.15□□□□□ -0.94
CDH13-212ENST00000569144 ORAI2Q96SN7 254 aa9.15□□□□□ -0.94
CDH13-212ENST00000569144 ARIH1Q9Y4X5 557 aaPredicted RBP9.15□□□□□ -0.94
CDH13-212ENST00000569144 E9PCH4 1651 aa9.15□□□□□ -0.94
CDH13-212ENST00000569144 IQGAP3Q86VI3 1631 aa9.15□□□□□ -0.94
CDH13-212ENST00000569144 ZNF316A6NFI3 1004 aaPredicted RBP9.14□□□□□ -0.95
CDH13-212ENST00000569144 ARHGEF1Q92888 912 aaKnown RBP9.14□□□□□ -0.95
CDH13-212ENST00000569144 RALGAPBQ86X10 1494 aa9.14□□□□□ -0.95
CDH13-212ENST00000569144 SPHKAPQ2M3C7 1700 aa9.14□□□□□ -0.95
CDH13-212ENST00000569144 GLI3P10071 1580 aa9.13□□□□□ -0.95
CDH13-212ENST00000569144 HRCP23327 699 aa9.13□□□□□ -0.95
CDH13-212ENST00000569144 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.13□□□□□ -0.95
CDH13-212ENST00000569144 NPHP3Q7Z494 1330 aa9.12□□□□□ -0.95
CDH13-212ENST00000569144 SLIT2O94813 1529 aa9.12□□□□□ -0.95
CDH13-212ENST00000569144 UNC5CLQ8IV45 518 aa9.12□□□□□ -0.95
CDH13-212ENST00000569144 MARF1Q9Y4F3 1742 aaKnown RBP9.11□□□□□ -0.95
CDH13-212ENST00000569144 ERBB3P21860 1342 aa9.11□□□□□ -0.95
CDH13-212ENST00000569144 PXDNQ92626 1479 aa9.11□□□□□ -0.95
CDH13-212ENST00000569144 PSDA5PKW4 1024 aaPredicted RBP9.11□□□□□ -0.95
CDH13-212ENST00000569144 FAM205CA6NFA0 338 aa9.11□□□□□ -0.95
CDH13-212ENST00000569144 PDIA6Q15084 440 aa9.11□□□□□ -0.95
CDH13-212ENST00000569144 LHX6Q9UPM6 363 aa9.11□□□□□ -0.95
CDH13-212ENST00000569144 PRAG1Q86YV5 1406 aa9.11□□□□□ -0.95
CDH13-212ENST00000569144 SPDYE16A6NNV3 312 aaPredicted RBP9.1□□□□□ -0.95
CDH13-212ENST00000569144 BAG6P46379 1132 aa9.1□□□□□ -0.95
CDH13-212ENST00000569144 ZNF326Q5BKZ1 582 aaKnown RBP9.1□□□□□ -0.95
CDH13-212ENST00000569144 SEPT12Q8IYM1 358 aa9.1□□□□□ -0.95
CDH13-212ENST00000569144 ANO8Q9HCE9 1232 aaPredicted RBP9.1□□□□□ -0.95
CDH13-212ENST00000569144 ROBO2Q9HCK4 1378 aa9.1□□□□□ -0.95
CDH13-212ENST00000569144 POTEMA6NI47 508 aa9.09□□□□□ -0.95
CDH13-212ENST00000569144 HFM1A2PYH4 1435 aa9.08□□□□□ -0.96
CDH13-212ENST00000569144 ONECUT3O60422 494 aaPredicted RBP9.08□□□□□ -0.96
CDH13-212ENST00000569144 ESCO1Q5FWF5 840 aa9.08□□□□□ -0.96
CDH13-212ENST00000569144 VARS2Q5ST30 1063 aaKnown RBP9.08□□□□□ -0.96
CDH13-212ENST00000569144 POTEGQ6S5H5 508 aa9.08□□□□□ -0.96
CDH13-212ENST00000569144 NEXMIFQ5QGS0 1516 aa9.08□□□□□ -0.96
CDH13-212ENST00000569144 LRPPRCP42704 1394 aaKnown RBP9.08□□□□□ -0.96
CDH13-212ENST00000569144 YY1P25490 414 aa9.07□□□□□ -0.96
CDH13-212ENST00000569144 FAM50AQ14320 339 aaKnown RBP9.07□□□□□ -0.96
CDH13-212ENST00000569144 VPS72Q15906 364 aa9.07□□□□□ -0.96
CDH13-212ENST00000569144 KRT27Q7Z3Y8 459 aa9.07□□□□□ -0.96
CDH13-212ENST00000569144 HS3ST6Q96QI5 342 aa9.07□□□□□ -0.96
CDH13-212ENST00000569144 NUP155O75694 1391 aa9.07□□□□□ -0.96
CDH13-212ENST00000569144 BRWD3Q6RI45 1802 aa9.07□□□□□ -0.96
CDH13-212ENST00000569144 CDC42BPGQ6DT37 1551 aa9.07□□□□□ -0.96
CDH13-212ENST00000569144 POTEB3A0JP26 581 aa9.06□□□□□ -0.96
CDH13-212ENST00000569144 FOXO3O43524 673 aa9.06□□□□□ -0.96
CDH13-212ENST00000569144 XPCQ01831 940 aaPredicted RBP9.06□□□□□ -0.96
CDH13-212ENST00000569144 POTEBQ6S5H4 581 aa9.06□□□□□ -0.96
CDH13-212ENST00000569144 ROCK1Q13464 1354 aa9.06□□□□□ -0.96
CDH13-212ENST00000569144 USP32Q8NFA0 1604 aa9.05□□□□□ -0.96
CDH13-212ENST00000569144 ZNF454Q8N9F8 522 aa9.05□□□□□ -0.96
CDH13-212ENST00000569144 DDX12PQ92771 950 aa9.05□□□□□ -0.96
CDH13-212ENST00000569144 SPATA31A3Q5VYP0 1347 aa9.05□□□□□ -0.96
CDH13-212ENST00000569144 R3HDM1Q15032 1099 aaKnown RBP9.04□□□□□ -0.96
CDH13-212ENST00000569144 PTGER2P43116 358 aa9.03□□□□□ -0.96
CDH13-212ENST00000569144 FOSBP53539 338 aa9.03□□□□□ -0.96
CDH13-212ENST00000569144 EN1Q05925 392 aaPredicted RBP9.03□□□□□ -0.96
CDH13-212ENST00000569144 CCDC9Q9Y3X0 531 aaKnown RBP9.03□□□□□ -0.96
CDH13-212ENST00000569144 CCDC144AA2RUR9 1427 aa9.03□□□□□ -0.96
CDH13-212ENST00000569144 DISP2A7MBM2 1401 aa9.03□□□□□ -0.96
CDH13-212ENST00000569144 SEMA3EO15041 775 aa9.02□□□□□ -0.97
CDH13-212ENST00000569144 PPP4R3BQ5MIZ7 849 aa9.02□□□□□ -0.97
CDH13-212ENST00000569144 NAIPQ13075 1403 aa9.02□□□□□ -0.97
CDH13-212ENST00000569144 NWD2Q9ULI1 1742 aa9.02□□□□□ -0.97
CDH13-212ENST00000569144 CLTCL1P53675 1640 aa9.02□□□□□ -0.97
CDH13-212ENST00000569144 GRXCR2A6NFK2 248 aa9.01□□□□□ -0.97
CDH13-212ENST00000569144 PHF14O94880 888 aa9.01□□□□□ -0.97
CDH13-212ENST00000569144 RGPD1P0DJD0 1748 aa9.01□□□□□ -0.97
CDH13-212ENST00000569144 PCDHGA10Q9Y5H3 936 aa9.01□□□□□ -0.97
CDH13-212ENST00000569144 PLCH1Q4KWH8 1693 aa9□□□□□ -0.97
CDH13-212ENST00000569144 TNS3Q68CZ2 1445 aa9□□□□□ -0.97
CDH13-212ENST00000569144 A0A0G2JS52 829 aa9□□□□□ -0.97
CDH13-212ENST00000569144 LOC105371045A0A1W2PR82 267 aa9□□□□□ -0.97
CDH13-212ENST00000569144 MLLT3P42568 568 aaPredicted RBP9□□□□□ -0.97
CDH13-212ENST00000569144 MYT1Q01538 1121 aa9□□□□□ -0.97
CDH13-212ENST00000569144 KRT28Q7Z3Y7 464 aa9□□□□□ -0.97
CDH13-212ENST00000569144 KIF1AQ12756 1690 aa9□□□□□ -0.97
CDH13-212ENST00000569144 NUTM2FA1L443 756 aa8.99□□□□□ -0.97
CDH13-212ENST00000569144 NBR1Q14596 966 aa8.99□□□□□ -0.97
CDH13-212ENST00000569144 FAM98CQ17RN3 349 aaKnown RBP8.99□□□□□ -0.97
CDH13-212ENST00000569144 TYW1BQ6NUM6 668 aa8.99□□□□□ -0.97
CDH13-212ENST00000569144 ZNF687Q8N1G0 1237 aa8.99□□□□□ -0.97
CDH13-212ENST00000569144 ZDHHC16Q969W1 377 aa8.99□□□□□ -0.97
CDH13-212ENST00000569144 EPAS1Q99814 870 aa8.99□□□□□ -0.97
CDH13-212ENST00000569144 RPGRIP1LQ68CZ1 1315 aa8.99□□□□□ -0.97
CDH13-212ENST00000569144 TECPR2O15040 1411 aa8.98□□□□□ -0.97
CDH13-212ENST00000569144 EZH2Q15910 746 aaKnown RBP8.98□□□□□ -0.97
CDH13-212ENST00000569144 CABLES1Q8TDN4 633 aa8.98□□□□□ -0.97
CDH13-212ENST00000569144 ADGRB2O60241 1585 aa8.98□□□□□ -0.97
CDH13-212ENST00000569144 SBNO1A3KN83 1393 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms