RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 FANCIQ9NVI1 1328 aa20.17■□□□□ 0.82
SNX20-204ENST00000568993 HSP90AB2PQ58FF8 381 aa20.17■□□□□ 0.82
SNX20-204ENST00000568993 PROSER2Q86WR7 435 aaPredicted RBP20.17■□□□□ 0.82
SNX20-204ENST00000568993 PDE3AQ14432 1141 aa20.15■□□□□ 0.82
SNX20-204ENST00000568993 ESCO1Q5FWF5 840 aa20.15■□□□□ 0.82
SNX20-204ENST00000568993 C14orf37Q86TY3 774 aa20.15■□□□□ 0.82
SNX20-204ENST00000568993 ABTB2Q8N961 1025 aa20.15■□□□□ 0.82
SNX20-204ENST00000568993 NCOA3Q9Y6Q9 1424 aa20.15■□□□□ 0.82
SNX20-204ENST00000568993 CALD1Q05682 793 aaKnown RBP20.14■□□□□ 0.81
SNX20-204ENST00000568993 C19orf44Q9H6X5 657 aa20.14■□□□□ 0.81
SNX20-204ENST00000568993 DLG5Q8TDM6 1919 aa20.13■□□□□ 0.81
SNX20-204ENST00000568993 ARHGEF10O15013 1369 aa20.13■□□□□ 0.81
SNX20-204ENST00000568993 LMOD3Q0VAK6 560 aa20.12■□□□□ 0.81
SNX20-204ENST00000568993 SULT6B1Q6IMI4 303 aa20.12■□□□□ 0.81
SNX20-204ENST00000568993 TSR2Q969E8 191 aaKnown RBP20.12■□□□□ 0.81
SNX20-204ENST00000568993 PAK3O75914 559 aaPredicted RBP20.11■□□□□ 0.81
SNX20-204ENST00000568993 PSME1Q06323 249 aa20.11■□□□□ 0.81
SNX20-204ENST00000568993 SOX12O15370 315 aa20.1■□□□□ 0.81
SNX20-204ENST00000568993 AMPHP49418 695 aa20.1■□□□□ 0.81
SNX20-204ENST00000568993 STRCP1A6NGW2 1772 aa20.1■□□□□ 0.81
SNX20-204ENST00000568993 EXOSC9Q06265 439 aaKnown RBP20.1■□□□□ 0.81
SNX20-204ENST00000568993 KIF1AQ12756 1690 aa20.1■□□□□ 0.81
SNX20-204ENST00000568993 KDRP35968 1356 aa20.1■□□□□ 0.81
SNX20-204ENST00000568993 DCCP43146 1447 aa20.09■□□□□ 0.81
SNX20-204ENST00000568993 AEBP1Q8IUX7 1158 aa20.09■□□□□ 0.81
SNX20-204ENST00000568993 C1orf167Q5SNV9 1468 aa20.09■□□□□ 0.81
SNX20-204ENST00000568993 KDM4FA0A1W2PPD8 638 aa20.09■□□□□ 0.81
SNX20-204ENST00000568993 ORAI2Q96SN7 254 aa20.09■□□□□ 0.81
SNX20-204ENST00000568993 RTL1A6NKG5 1358 aa20.08■□□□□ 0.81
SNX20-204ENST00000568993 ZNF853P0CG23 659 aa20.08■□□□□ 0.8
SNX20-204ENST00000568993 IFT57Q9NWB7 429 aa20.08■□□□□ 0.8
SNX20-204ENST00000568993 IGSF1Q8N6C5 1336 aa20.08■□□□□ 0.8
SNX20-204ENST00000568993 HOXC9P31274 260 aa20.07■□□□□ 0.8
SNX20-204ENST00000568993 NUTM2GQ5VZR2 741 aa20.07■□□□□ 0.8
SNX20-204ENST00000568993 NFAT5O94916 1531 aa20.07■□□□□ 0.8
SNX20-204ENST00000568993 TMEM94Q12767 1356 aa20.06■□□□□ 0.8
SNX20-204ENST00000568993 GNAI1P63096 354 aa20.06■□□□□ 0.8
SNX20-204ENST00000568993 LMTK3Q96Q04 1460 aa20.06■□□□□ 0.8
SNX20-204ENST00000568993 TRPM3Q9HCF6 1732 aaPredicted RBP20.05■□□□□ 0.8
SNX20-204ENST00000568993 HSPA2P54652 639 aa20.05■□□□□ 0.8
SNX20-204ENST00000568993 KCNH5Q8NCM2 988 aa20.05■□□□□ 0.8
SNX20-204ENST00000568993 ZNF428Q96B54 188 aa20.05■□□□□ 0.8
SNX20-204ENST00000568993 PHRF1Q9P1Y6 1649 aaKnown RBP20.05■□□□□ 0.8
SNX20-204ENST00000568993 MST1RQ04912 1400 aa20.04■□□□□ 0.8
SNX20-204ENST00000568993 CANXP27824 592 aaKnown RBP20.04■□□□□ 0.8
SNX20-204ENST00000568993 EYA1Q99502 592 aa20.04■□□□□ 0.8
SNX20-204ENST00000568993 LTN1O94822 1766 aa20.04■□□□□ 0.8
SNX20-204ENST00000568993 FOXO3O43524 673 aa20.03■□□□□ 0.8
SNX20-204ENST00000568993 AAMPQ13685 434 aa20.03■□□□□ 0.8
SNX20-204ENST00000568993 CFAP44Q96MT7 982 aa20.03■□□□□ 0.8
SNX20-204ENST00000568993 FRAT1Q92837 279 aaPredicted RBP20.02■□□□□ 0.8
SNX20-204ENST00000568993 THUMPD2Q9BTF0 503 aaKnown RBP20.02■□□□□ 0.8
SNX20-204ENST00000568993 SLIT3O75094 1523 aa20.02■□□□□ 0.8
SNX20-204ENST00000568993 KDM2BQ8NHM5 1336 aa20.02■□□□□ 0.8
SNX20-204ENST00000568993 STRCQ7RTU9 1775 aa20.02■□□□□ 0.8
SNX20-204ENST00000568993 ATF3P18847 181 aa20.02■□□□□ 0.79
SNX20-204ENST00000568993 ALDH1L2Q3SY69 923 aa20.02■□□□□ 0.79
SNX20-204ENST00000568993 IP6K1Q92551 441 aa20.02■□□□□ 0.79
SNX20-204ENST00000568993 SSH1Q8WYL5 1049 aa20.01■□□□□ 0.79
SNX20-204ENST00000568993 BRPF1P55201 1214 aaPredicted RBP20■□□□□ 0.79
SNX20-204ENST00000568993 PANK1Q8TE04 598 aa20■□□□□ 0.79
SNX20-204ENST00000568993 BCL2L13Q9BXK5 485 aa20■□□□□ 0.79
SNX20-204ENST00000568993 MS4A1P11836 297 aa20■□□□□ 0.79
SNX20-204ENST00000568993 ZKSCAN2Q63HK3 967 aa20■□□□□ 0.79
SNX20-204ENST00000568993 KRT28Q7Z3Y7 464 aa20■□□□□ 0.79
SNX20-204ENST00000568993 RBM19Q9Y4C8 960 aaKnown RBP20■□□□□ 0.79
SNX20-204ENST00000568993 FAM83GA6ND36 823 aa19.99■□□□□ 0.79
SNX20-204ENST00000568993 MBIPQ9NS73 344 aa19.99■□□□□ 0.79
SNX20-204ENST00000568993 SMC4Q9NTJ3 1288 aa19.99■□□□□ 0.79
SNX20-204ENST00000568993 USP19O94966 1318 aa19.99■□□□□ 0.79
SNX20-204ENST00000568993 CENPQQ7L2Z9 268 aaPredicted RBP19.98■□□□□ 0.79
SNX20-204ENST00000568993 CADPS2Q86UW7 1296 aa19.98■□□□□ 0.79
SNX20-204ENST00000568993 LAS1LQ9Y4W2 734 aaKnown RBP19.98■□□□□ 0.79
SNX20-204ENST00000568993 COG6Q9Y2V7 657 aa19.98■□□□□ 0.79
SNX20-204ENST00000568993 RLBP1P12271 317 aa19.97■□□□□ 0.79
SNX20-204ENST00000568993 ALS2Q96Q42 1657 aa19.97■□□□□ 0.79
SNX20-204ENST00000568993 VAMP4O75379 141 aa19.97■□□□□ 0.79
SNX20-204ENST00000568993 GCP02774 474 aa19.96■□□□□ 0.79
SNX20-204ENST00000568993 MTHFSDQ2M296 383 aaKnown RBP19.96■□□□□ 0.79
SNX20-204ENST00000568993 GAS2L2Q8NHY3 880 aa19.96■□□□□ 0.79
SNX20-204ENST00000568993 KIF16BQ96L93 1317 aa19.96■□□□□ 0.79
SNX20-204ENST00000568993 XIRP1Q702N8 1843 aaKnown RBP19.96■□□□□ 0.79
SNX20-204ENST00000568993 DCTN1Q14203 1278 aa19.95■□□□□ 0.78
SNX20-204ENST00000568993 CLUAP1Q96AJ1 413 aa19.95■□□□□ 0.78
SNX20-204ENST00000568993 CHL1O00533 1208 aa19.95■□□□□ 0.78
SNX20-204ENST00000568993 HTATSF1O43719 755 aaKnown RBP19.95■□□□□ 0.78
SNX20-204ENST00000568993 XPCQ01831 940 aaPredicted RBP19.95■□□□□ 0.78
SNX20-204ENST00000568993 ARHGEF25Q86VW2 580 aa19.95■□□□□ 0.78
SNX20-204ENST00000568993 MSH6P52701 1360 aa19.94■□□□□ 0.78
SNX20-204ENST00000568993 TCERG1O14776 1098 aaKnown RBP19.94■□□□□ 0.78
SNX20-204ENST00000568993 DZIP1LQ8IYY4 767 aaKnown RBP19.94■□□□□ 0.78
SNX20-204ENST00000568993 TNNQ9UQP3 1299 aa19.94■□□□□ 0.78
SNX20-204ENST00000568993 CRB1P82279 1406 aa19.94■□□□□ 0.78
SNX20-204ENST00000568993 IPO8O15397 1037 aaKnown RBP19.93■□□□□ 0.78
SNX20-204ENST00000568993 ATF7IPQ6VMQ6 1270 aa19.93■□□□□ 0.78
SNX20-204ENST00000568993 TRIM27P14373 513 aa19.92■□□□□ 0.78
SNX20-204ENST00000568993 MVPQ14764 893 aaKnown RBP19.92■□□□□ 0.78
SNX20-204ENST00000568993 NOB1Q9ULX3 412 aaKnown RBP19.92■□□□□ 0.78
SNX20-204ENST00000568993 MCM10Q7L590 875 aa19.92■□□□□ 0.78
SNX20-204ENST00000568993 TSPYL6Q8N831 410 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms