RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 AATKQ6ZMQ8 1374 aa12.47□□□□□ -0.41
CNOT1-214ENST00000568917 USP6P35125 1406 aa12.47□□□□□ -0.41
CNOT1-214ENST00000568917 SMG6Q86US8 1419 aaKnown RBP12.47□□□□□ -0.41
CNOT1-214ENST00000568917 ADAMTS8Q9UP79 889 aa12.46□□□□□ -0.41
CNOT1-214ENST00000568917 SSH2Q76I76 1423 aa12.46□□□□□ -0.42
CNOT1-214ENST00000568917 TTC21AQ8NDW8 1320 aa12.45□□□□□ -0.42
CNOT1-214ENST00000568917 C7P10643 843 aa12.45□□□□□ -0.42
CNOT1-214ENST00000568917 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
CNOT1-214ENST00000568917 GGNBP2Q9H3C7 697 aa12.45□□□□□ -0.42
CNOT1-214ENST00000568917 METRNQ9UJH8 293 aa12.45□□□□□ -0.42
CNOT1-214ENST00000568917 PNPLA6Q8IY17 1366 aa12.45□□□□□ -0.42
CNOT1-214ENST00000568917 LRRC7Q96NW7 1537 aa12.45□□□□□ -0.42
CNOT1-214ENST00000568917 USP54Q70EL1 1684 aa12.44□□□□□ -0.42
CNOT1-214ENST00000568917 KDM4FA0A1W2PPD8 638 aa12.44□□□□□ -0.42
CNOT1-214ENST00000568917 MTHFSP49914 203 aa12.44□□□□□ -0.42
CNOT1-214ENST00000568917 RGPD8O14715 1765 aaPredicted RBP12.44□□□□□ -0.42
CNOT1-214ENST00000568917 ACEP12821 1306 aa12.44□□□□□ -0.42
CNOT1-214ENST00000568917 NCKAP5LQ9HCH0 1330 aa12.44□□□□□ -0.42
CNOT1-214ENST00000568917 LMTK3Q96Q04 1460 aa12.44□□□□□ -0.42
CNOT1-214ENST00000568917 POTEFA5A3E0 1075 aa12.43□□□□□ -0.42
CNOT1-214ENST00000568917 COL3A1P02461 1466 aaPredicted RBP12.43□□□□□ -0.42
CNOT1-214ENST00000568917 DCCP43146 1447 aa12.42□□□□□ -0.42
CNOT1-214ENST00000568917 MAP2P11137 1827 aaKnown RBP12.42□□□□□ -0.42
CNOT1-214ENST00000568917 COG3Q96JB2 828 aa12.42□□□□□ -0.42
CNOT1-214ENST00000568917 NUDCQ9Y266 331 aa12.42□□□□□ -0.42
CNOT1-214ENST00000568917 TTC21BQ7Z4L5 1316 aa12.42□□□□□ -0.42
CNOT1-214ENST00000568917 OVOS2A0A0J9YW53 1432 aa12.42□□□□□ -0.42
CNOT1-214ENST00000568917 OVOS2Q6IE36 1432 aa12.42□□□□□ -0.42
CNOT1-214ENST00000568917 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.41□□□□□ -0.42
CNOT1-214ENST00000568917 ZFP91Q96JP5 570 aaPredicted RBP12.41□□□□□ -0.42
CNOT1-214ENST00000568917 USP31Q70CQ4 1352 aa12.41□□□□□ -0.42
CNOT1-214ENST00000568917 CDK12Q9NYV4 1490 aaPredicted RBP12.41□□□□□ -0.42
CNOT1-214ENST00000568917 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.4□□□□□ -0.42
CNOT1-214ENST00000568917 PNNQ9H307 717 aaKnown RBP12.4□□□□□ -0.42
CNOT1-214ENST00000568917 POTEB2H3BUK9 544 aa12.39□□□□□ -0.43
CNOT1-214ENST00000568917 TNNT2P45379 298 aaPredicted RBP12.39□□□□□ -0.43
CNOT1-214ENST00000568917 IER5LQ5T953 404 aa12.39□□□□□ -0.43
CNOT1-214ENST00000568917 COLQQ9Y215 455 aaPredicted RBP12.39□□□□□ -0.43
CNOT1-214ENST00000568917 KIF1AQ12756 1690 aa12.39□□□□□ -0.43
CNOT1-214ENST00000568917 STRCQ7RTU9 1775 aa12.39□□□□□ -0.43
CNOT1-214ENST00000568917 NEFLP07196 543 aa12.38□□□□□ -0.43
CNOT1-214ENST00000568917 ERICH6BQ5W0A0 696 aa12.38□□□□□ -0.43
CNOT1-214ENST00000568917 NME9Q86XW9 330 aa12.38□□□□□ -0.43
CNOT1-214ENST00000568917 NGDNQ8NEJ9 315 aaKnown RBP12.38□□□□□ -0.43
CNOT1-214ENST00000568917 ZNF521Q96K83 1311 aa12.38□□□□□ -0.43
CNOT1-214ENST00000568917 IQSEC2Q5JU85 1478 aa12.38□□□□□ -0.43
CNOT1-214ENST00000568917 RUNDC1Q96C34 613 aa12.37□□□□□ -0.43
CNOT1-214ENST00000568917 C19orf44Q9H6X5 657 aa12.37□□□□□ -0.43
CNOT1-214ENST00000568917 POLKQ9UBT6 870 aa12.37□□□□□ -0.43
CNOT1-214ENST00000568917 KIF24Q5T7B8 1368 aa12.37□□□□□ -0.43
CNOT1-214ENST00000568917 DIAPH1O60610 1272 aaKnown RBP12.37□□□□□ -0.43
CNOT1-214ENST00000568917 PROSER2Q86WR7 435 aaPredicted RBP12.37□□□□□ -0.43
CNOT1-214ENST00000568917 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
CNOT1-214ENST00000568917 PIK3C2AO00443 1686 aa12.36□□□□□ -0.43
CNOT1-214ENST00000568917 STRCP1A6NGW2 1772 aa12.36□□□□□ -0.43
CNOT1-214ENST00000568917 CCDC27Q2M243 656 aa12.36□□□□□ -0.43
CNOT1-214ENST00000568917 LHX8Q68G74 356 aa12.36□□□□□ -0.43
CNOT1-214ENST00000568917 IRX5P78411 483 aaPredicted RBP12.35□□□□□ -0.43
CNOT1-214ENST00000568917 RNF123Q5XPI4 1314 aa12.34□□□□□ -0.43
CNOT1-214ENST00000568917 NUTM2FA1L443 756 aa12.34□□□□□ -0.43
CNOT1-214ENST00000568917 PMFBP1Q8TBY8 1022 aa12.34□□□□□ -0.43
CNOT1-214ENST00000568917 MST1RQ04912 1400 aa12.33□□□□□ -0.44
CNOT1-214ENST00000568917 APAF1O14727 1248 aa12.33□□□□□ -0.44
CNOT1-214ENST00000568917 FCHSD2O94868 740 aa12.33□□□□□ -0.44
CNOT1-214ENST00000568917 POTEJP0CG39 1038 aa12.33□□□□□ -0.44
CNOT1-214ENST00000568917 U2AF1L5P0DN76 240 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-214ENST00000568917 U2AF1Q01081 240 aaKnown RBP eCLIP12.33□□□□□ -0.44
CNOT1-214ENST00000568917 GOLGA2Q08379 1002 aa12.33□□□□□ -0.44
CNOT1-214ENST00000568917 C14orf37Q86TY3 774 aa12.33□□□□□ -0.44
CNOT1-214ENST00000568917 MARF1Q9Y4F3 1742 aaKnown RBP12.33□□□□□ -0.44
CNOT1-214ENST00000568917 C1orf167Q5SNV9 1468 aa12.32□□□□□ -0.44
CNOT1-214ENST00000568917 SUPT16HQ9Y5B9 1047 aaKnown RBP12.32□□□□□ -0.44
CNOT1-214ENST00000568917 TMEM94Q12767 1356 aa12.31□□□□□ -0.44
CNOT1-214ENST00000568917 HSPA2P54652 639 aa12.31□□□□□ -0.44
CNOT1-214ENST00000568917 CADPS2Q86UW7 1296 aa12.31□□□□□ -0.44
CNOT1-214ENST00000568917 WDR63Q8IWG1 891 aa12.31□□□□□ -0.44
CNOT1-214ENST00000568917 CCDC146Q8IYE0 955 aa12.31□□□□□ -0.44
CNOT1-214ENST00000568917 PLEKHF1Q96S99 279 aa12.31□□□□□ -0.44
CNOT1-214ENST00000568917 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-214ENST00000568917 TAOK2Q9UL54 1235 aa12.31□□□□□ -0.44
CNOT1-214ENST00000568917 PHRF1Q9P1Y6 1649 aaKnown RBP12.31□□□□□ -0.44
CNOT1-214ENST00000568917 E9PSI1 815 aa12.3□□□□□ -0.44
CNOT1-214ENST00000568917 IL13P35225 146 aa12.3□□□□□ -0.44
CNOT1-214ENST00000568917 MKRN3Q13064 507 aaKnown RBP12.3□□□□□ -0.44
CNOT1-214ENST00000568917 TRMT2AQ8IZ69 625 aaKnown RBP12.3□□□□□ -0.44
CNOT1-214ENST00000568917 TCP11L2Q8N4U5 519 aa12.3□□□□□ -0.44
CNOT1-214ENST00000568917 EFCAB3Q8N7B9 438 aa12.3□□□□□ -0.44
CNOT1-214ENST00000568917 TRPM3Q9HCF6 1732 aaPredicted RBP12.3□□□□□ -0.44
CNOT1-214ENST00000568917 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
CNOT1-214ENST00000568917 FLT4P35916 1363 aa12.3□□□□□ -0.44
CNOT1-214ENST00000568917 MSH6P52701 1360 aa12.3□□□□□ -0.44
CNOT1-214ENST00000568917 XIRP1Q702N8 1843 aaKnown RBP12.29□□□□□ -0.44
CNOT1-214ENST00000568917 U2SURPO15042 1029 aaKnown RBP12.29□□□□□ -0.44
CNOT1-214ENST00000568917 SEC24BO95487 1268 aa12.29□□□□□ -0.44
CNOT1-214ENST00000568917 NEFMP07197 916 aa12.29□□□□□ -0.44
CNOT1-214ENST00000568917 ATF3P18847 181 aa12.29□□□□□ -0.44
CNOT1-214ENST00000568917 SLFN5Q08AF3 891 aa12.29□□□□□ -0.44
CNOT1-214ENST00000568917 ESCO1Q5FWF5 840 aa12.29□□□□□ -0.44
CNOT1-214ENST00000568917 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
CNOT1-214ENST00000568917 WWC1Q8IX03 1113 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms