RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 ITPRIPQ8IWB1 547 aa12.29□□□□□ -0.44
TCF4-240ENST00000568673 ITSN1Q15811 1721 aa12.28□□□□□ -0.44
TCF4-240ENST00000568673 PLEKHG3A1L390 1219 aa12.28□□□□□ -0.44
TCF4-240ENST00000568673 GNAI1P63096 354 aa12.28□□□□□ -0.44
TCF4-240ENST00000568673 HDAC1Q13547 482 aaPredicted RBP12.28□□□□□ -0.44
TCF4-240ENST00000568673 IFT57Q9NWB7 429 aa12.28□□□□□ -0.44
TCF4-240ENST00000568673 VIRMAQ69YN4 1812 aaKnown RBP12.28□□□□□ -0.44
TCF4-240ENST00000568673 LAS1LQ9Y4W2 734 aaKnown RBP12.28□□□□□ -0.44
TCF4-240ENST00000568673 EID1Q9Y6B2 187 aa12.28□□□□□ -0.44
TCF4-240ENST00000568673 ACEP12821 1306 aa12.27□□□□□ -0.44
TCF4-240ENST00000568673 TTC21BQ7Z4L5 1316 aa12.27□□□□□ -0.44
TCF4-240ENST00000568673 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.27□□□□□ -0.44
TCF4-240ENST00000568673 ZNF853P0CG23 659 aa12.27□□□□□ -0.44
TCF4-240ENST00000568673 ADRA2BP18089 450 aa12.27□□□□□ -0.44
TCF4-240ENST00000568673 CEBPAP49715 358 aaPredicted RBP12.27□□□□□ -0.44
TCF4-240ENST00000568673 TMEM57Q8N5G2 664 aa12.27□□□□□ -0.44
TCF4-240ENST00000568673 USP35Q9P2H5 1018 aa12.27□□□□□ -0.44
TCF4-240ENST00000568673 VAMP4O75379 141 aa12.27□□□□□ -0.45
TCF4-240ENST00000568673 LMOD3Q0VAK6 560 aa12.27□□□□□ -0.45
TCF4-240ENST00000568673 ZBTB40Q9NUA8 1239 aa12.27□□□□□ -0.45
TCF4-240ENST00000568673 USP19O94966 1318 aa12.26□□□□□ -0.45
TCF4-240ENST00000568673 THUMPD2Q9BTF0 503 aaKnown RBP12.26□□□□□ -0.45
TCF4-240ENST00000568673 SLC4A3P48751 1232 aa12.26□□□□□ -0.45
TCF4-240ENST00000568673 SLC26A8Q96RN1 970 aa12.26□□□□□ -0.45
TCF4-240ENST00000568673 SEC24BO95487 1268 aa12.25□□□□□ -0.45
TCF4-240ENST00000568673 DEKP35659 375 aaKnown RBP12.25□□□□□ -0.45
TCF4-240ENST00000568673 ARHGAP45Q92619 1136 aa12.25□□□□□ -0.45
TCF4-240ENST00000568673 CFAP44Q96MT7 982 aa12.25□□□□□ -0.45
TCF4-240ENST00000568673 PTPRUQ92729 1446 aa12.25□□□□□ -0.45
TCF4-240ENST00000568673 MBIPQ9NS73 344 aa12.25□□□□□ -0.45
TCF4-240ENST00000568673 TBX22Q9Y458 520 aa12.25□□□□□ -0.45
TCF4-240ENST00000568673 SMC5Q8IY18 1101 aa12.24□□□□□ -0.45
TCF4-240ENST00000568673 USP6P35125 1406 aa12.24□□□□□ -0.45
TCF4-240ENST00000568673 TOPAZ1Q8N9V7 1692 aa12.24□□□□□ -0.45
TCF4-240ENST00000568673 SLIT1O75093 1534 aa12.24□□□□□ -0.45
TCF4-240ENST00000568673 NUTM2FA1L443 756 aa12.23□□□□□ -0.45
TCF4-240ENST00000568673 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
TCF4-240ENST00000568673 AMOTL2Q9Y2J4 779 aa12.23□□□□□ -0.45
TCF4-240ENST00000568673 OVOS2A0A0J9YW53 1432 aa12.23□□□□□ -0.45
TCF4-240ENST00000568673 OVOS2Q6IE36 1432 aa12.23□□□□□ -0.45
TCF4-240ENST00000568673 ARHGAP23Q9P227 1491 aa12.23□□□□□ -0.45
TCF4-240ENST00000568673 EIF4A2Q14240 407 aaKnown RBP12.23□□□□□ -0.45
TCF4-240ENST00000568673 NRKQ7Z2Y5 1582 aa12.23□□□□□ -0.45
TCF4-240ENST00000568673 TSPYL6Q8N831 410 aa12.23□□□□□ -0.45
TCF4-240ENST00000568673 DLG5Q8TDM6 1919 aa12.22□□□□□ -0.45
TCF4-240ENST00000568673 TWISTNBQ3B726 338 aaPredicted RBP12.22□□□□□ -0.45
TCF4-240ENST00000568673 THEMISQ8N1K5 641 aaPredicted RBP12.22□□□□□ -0.45
TCF4-240ENST00000568673 CHMP4BQ9H444 224 aaKnown RBP12.22□□□□□ -0.45
TCF4-240ENST00000568673 USP31Q70CQ4 1352 aa12.22□□□□□ -0.45
TCF4-240ENST00000568673 SSH2Q76I76 1423 aa12.21□□□□□ -0.45
TCF4-240ENST00000568673 SULT6B1Q6IMI4 303 aa12.21□□□□□ -0.45
TCF4-240ENST00000568673 UPF2Q9HAU5 1272 aaKnown RBP12.21□□□□□ -0.45
TCF4-240ENST00000568673 FAM83GA6ND36 823 aa12.21□□□□□ -0.46
TCF4-240ENST00000568673 ELL2O00472 640 aaPredicted RBP12.21□□□□□ -0.46
TCF4-240ENST00000568673 ZBTB7BO15156 539 aaPredicted RBP12.21□□□□□ -0.46
TCF4-240ENST00000568673 PIK3R4Q99570 1358 aa12.21□□□□□ -0.46
TCF4-240ENST00000568673 PTCH1Q13635 1447 aa12.21□□□□□ -0.46
TCF4-240ENST00000568673 AEBP1Q8IUX7 1158 aa12.2□□□□□ -0.46
TCF4-240ENST00000568673 C8orf58Q8NAV2 365 aa12.2□□□□□ -0.46
TCF4-240ENST00000568673 TTC21AQ8NDW8 1320 aa12.2□□□□□ -0.46
TCF4-240ENST00000568673 HSP90AB2PQ58FF8 381 aa12.2□□□□□ -0.46
TCF4-240ENST00000568673 DCTN1Q14203 1278 aa12.19□□□□□ -0.46
TCF4-240ENST00000568673 NALCNQ8IZF0 1738 aa12.19□□□□□ -0.46
TCF4-240ENST00000568673 TBC1D32Q96NH3 1257 aa12.19□□□□□ -0.46
TCF4-240ENST00000568673 ABCC4O15439 1325 aa12.18□□□□□ -0.46
TCF4-240ENST00000568673 NUCB1Q02818 461 aa12.18□□□□□ -0.46
TCF4-240ENST00000568673 BECN1Q14457 450 aa12.18□□□□□ -0.46
TCF4-240ENST00000568673 HAP1P54257 671 aaPredicted RBP12.17□□□□□ -0.46
TCF4-240ENST00000568673 NFKBIBQ15653 356 aa12.17□□□□□ -0.46
TCF4-240ENST00000568673 API5Q9BZZ5 524 aaKnown RBP12.17□□□□□ -0.46
TCF4-240ENST00000568673 DIP2AQ14689 1571 aa12.17□□□□□ -0.46
TCF4-240ENST00000568673 PEAK1Q9H792 1746 aa12.17□□□□□ -0.46
TCF4-240ENST00000568673 CHL1O00533 1208 aa12.16□□□□□ -0.46
TCF4-240ENST00000568673 NGDNQ8NEJ9 315 aaKnown RBP12.16□□□□□ -0.46
TCF4-240ENST00000568673 FER1L4A9Z1Z3 1794 aa12.16□□□□□ -0.46
TCF4-240ENST00000568673 MAP3K19Q56UN5 1328 aa12.16□□□□□ -0.46
TCF4-240ENST00000568673 CHD1LQ86WJ1 897 aa12.15□□□□□ -0.46
TCF4-240ENST00000568673 GCC1Q96CN9 775 aa12.15□□□□□ -0.46
TCF4-240ENST00000568673 RGPD1P0DJD0 1748 aa12.15□□□□□ -0.46
TCF4-240ENST00000568673 SOX12O15370 315 aa12.15□□□□□ -0.46
TCF4-240ENST00000568673 SBNO1A3KN83 1393 aa12.15□□□□□ -0.47
TCF4-240ENST00000568673 ARHGEF10O15013 1369 aa12.15□□□□□ -0.47
TCF4-240ENST00000568673 MCM10Q7L590 875 aa12.14□□□□□ -0.47
TCF4-240ENST00000568673 FLT4P35916 1363 aa12.14□□□□□ -0.47
TCF4-240ENST00000568673 KIF24Q5T7B8 1368 aa12.14□□□□□ -0.47
TCF4-240ENST00000568673 KIAA0232Q92628 1395 aa12.14□□□□□ -0.47
TCF4-240ENST00000568673 LNPKQ9C0E8 428 aa12.13□□□□□ -0.47
TCF4-240ENST00000568673 ANKARQ7Z5J8 1434 aa12.13□□□□□ -0.47
TCF4-240ENST00000568673 SIRT2Q8IXJ6 389 aa12.13□□□□□ -0.47
TCF4-240ENST00000568673 C1orf115Q9H7X2 142 aa12.13□□□□□ -0.47
TCF4-240ENST00000568673 RGPD8O14715 1765 aaPredicted RBP12.12□□□□□ -0.47
TCF4-240ENST00000568673 XRN1Q8IZH2 1706 aaKnown RBP12.12□□□□□ -0.47
TCF4-240ENST00000568673 KCNA6P17658 529 aa12.12□□□□□ -0.47
TCF4-240ENST00000568673 AMPHP49418 695 aa12.12□□□□□ -0.47
TCF4-240ENST00000568673 KDRP35968 1356 aa12.12□□□□□ -0.47
TCF4-240ENST00000568673 ANKRD45Q5TZF3 282 aa12.12□□□□□ -0.47
TCF4-240ENST00000568673 INTS3Q68E01 1043 aaKnown RBP12.12□□□□□ -0.47
TCF4-240ENST00000568673 C22orf23Q9BZE7 217 aa12.12□□□□□ -0.47
TCF4-240ENST00000568673 CRB1P82279 1406 aa12.11□□□□□ -0.47
TCF4-240ENST00000568673 NLRP6P59044 892 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms