RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 MROH2AA6NES4 1674 aa9.64□□□□□ -0.87
ATXN3-250ENST00000568290 SOX12O15370 315 aa9.64□□□□□ -0.87
ATXN3-250ENST00000568290 DIAPH1O60610 1272 aaKnown RBP9.64□□□□□ -0.87
ATXN3-250ENST00000568290 BRPF1P55201 1214 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-250ENST00000568290 HDAC1Q13547 482 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-250ENST00000568290 COG6Q9Y2V7 657 aa9.64□□□□□ -0.87
ATXN3-250ENST00000568290 DCBLD2Q96PD2 775 aa9.63□□□□□ -0.87
ATXN3-250ENST00000568290 SMC4Q9NTJ3 1288 aa9.63□□□□□ -0.87
ATXN3-250ENST00000568290 ISY1Q9ULR0 285 aaKnown RBP9.63□□□□□ -0.87
ATXN3-250ENST00000568290 NEXMIFQ5QGS0 1516 aa9.62□□□□□ -0.87
ATXN3-250ENST00000568290 IRX5P78411 483 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-250ENST00000568290 NEUROD2Q15784 382 aa9.62□□□□□ -0.87
ATXN3-250ENST00000568290 IER5LQ5T953 404 aa9.62□□□□□ -0.87
ATXN3-250ENST00000568290 IL27Q8NEV9 243 aa9.62□□□□□ -0.87
ATXN3-250ENST00000568290 ARHGAP45Q92619 1136 aa9.62□□□□□ -0.87
ATXN3-250ENST00000568290 MS4A4AQ96JQ5 239 aa9.62□□□□□ -0.87
ATXN3-250ENST00000568290 ADGRB2O60241 1585 aa9.62□□□□□ -0.87
ATXN3-250ENST00000568290 FRMPD1Q5SYB0 1578 aa9.62□□□□□ -0.87
ATXN3-250ENST00000568290 DLC1Q96QB1 1528 aa9.61□□□□□ -0.87
ATXN3-250ENST00000568290 ATP7BP35670 1465 aa9.61□□□□□ -0.87
ATXN3-250ENST00000568290 U2SURPO15042 1029 aaKnown RBP9.61□□□□□ -0.87
ATXN3-250ENST00000568290 TMPOP42166 694 aaKnown RBP9.61□□□□□ -0.87
ATXN3-250ENST00000568290 GNAI1P63096 354 aa9.61□□□□□ -0.87
ATXN3-250ENST00000568290 PLCB2Q00722 1185 aa9.61□□□□□ -0.87
ATXN3-250ENST00000568290 ATF7IPQ6VMQ6 1270 aa9.61□□□□□ -0.87
ATXN3-250ENST00000568290 GCC1Q96CN9 775 aa9.61□□□□□ -0.87
ATXN3-250ENST00000568290 SIRT1Q96EB6 747 aa9.61□□□□□ -0.87
ATXN3-250ENST00000568290 ARHGEF28Q8N1W1 1705 aaKnown RBP9.6□□□□□ -0.87
ATXN3-250ENST00000568290 DIP2CQ9Y2E4 1556 aa9.6□□□□□ -0.87
ATXN3-250ENST00000568290 YTHDC2Q9H6S0 1430 aaKnown RBP9.6□□□□□ -0.87
ATXN3-250ENST00000568290 POTEFA5A3E0 1075 aa9.6□□□□□ -0.87
ATXN3-250ENST00000568290 TNNT2P45379 298 aaPredicted RBP9.6□□□□□ -0.87
ATXN3-250ENST00000568290 PANK1Q8TE04 598 aa9.6□□□□□ -0.87
ATXN3-250ENST00000568290 ESF1Q9H501 851 aaKnown RBP9.6□□□□□ -0.87
ATXN3-250ENST00000568290 PHF8Q9UPP1 1060 aa9.6□□□□□ -0.87
ATXN3-250ENST00000568290 VIRMAQ69YN4 1812 aaKnown RBP9.6□□□□□ -0.87
ATXN3-250ENST00000568290 SHPRHQ149N8 1683 aa9.6□□□□□ -0.87
ATXN3-250ENST00000568290 KIF24Q5T7B8 1368 aa9.6□□□□□ -0.87
ATXN3-250ENST00000568290 REREQ9P2R6 1566 aa9.59□□□□□ -0.87
ATXN3-250ENST00000568290 CLTCQ00610 1675 aaKnown RBP9.59□□□□□ -0.87
ATXN3-250ENST00000568290 IDI1Q13907 227 aa9.59□□□□□ -0.87
ATXN3-250ENST00000568290 TMEM132EQ6IEE7 984 aa9.59□□□□□ -0.87
ATXN3-250ENST00000568290 HSCBQ8IWL3 235 aa9.59□□□□□ -0.87
ATXN3-250ENST00000568290 TBC1D32Q96NH3 1257 aa9.59□□□□□ -0.87
ATXN3-250ENST00000568290 PNPLA6Q8IY17 1366 aa9.59□□□□□ -0.87
ATXN3-250ENST00000568290 PPIP5K1Q6PFW1 1433 aa9.58□□□□□ -0.88
ATXN3-250ENST00000568290 AGLP35573 1532 aa9.58□□□□□ -0.88
ATXN3-250ENST00000568290 TULP4Q9NRJ4 1543 aa9.58□□□□□ -0.88
ATXN3-250ENST00000568290 IGHDP01880 384 aa9.58□□□□□ -0.88
ATXN3-250ENST00000568290 RIPK4P57078 832 aa9.58□□□□□ -0.88
ATXN3-250ENST00000568290 ITPRIPQ8IWB1 547 aa9.58□□□□□ -0.88
ATXN3-250ENST00000568290 PDCD7Q8N8D1 485 aaKnown RBP9.58□□□□□ -0.88
ATXN3-250ENST00000568290 CHMP4AQ9BY43 222 aa9.58□□□□□ -0.88
ATXN3-250ENST00000568290 API5Q9BZZ5 524 aaKnown RBP9.58□□□□□ -0.88
ATXN3-250ENST00000568290 CHMP5Q9NZZ3 219 aa9.58□□□□□ -0.88
ATXN3-250ENST00000568290 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-250ENST00000568290 PDZRN3Q9UPQ7 1066 aa9.58□□□□□ -0.88
ATXN3-250ENST00000568290 ANKRD26Q9UPS8 1709 aa9.58□□□□□ -0.88
ATXN3-250ENST00000568290 A0A1W2PP64 1363 aa9.58□□□□□ -0.88
ATXN3-250ENST00000568290 DDX11L8A8MPP1 907 aa9.57□□□□□ -0.88
ATXN3-250ENST00000568290 SKOR2Q2VWA4 1001 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-250ENST00000568290 CASC1Q6TDU7 716 aa9.57□□□□□ -0.88
ATXN3-250ENST00000568290 IFT57Q9NWB7 429 aa9.57□□□□□ -0.88
ATXN3-250ENST00000568290 CDC42BPGQ6DT37 1551 aa9.56□□□□□ -0.88
ATXN3-250ENST00000568290 AATKQ6ZMQ8 1374 aa9.56□□□□□ -0.88
ATXN3-250ENST00000568290 FYB1O15117 783 aa9.56□□□□□ -0.88
ATXN3-250ENST00000568290 NLRP6P59044 892 aa9.56□□□□□ -0.88
ATXN3-250ENST00000568290 MKRN3Q13064 507 aaKnown RBP9.56□□□□□ -0.88
ATXN3-250ENST00000568290 SMC5Q8IY18 1101 aa9.56□□□□□ -0.88
ATXN3-250ENST00000568290 SPRYD3Q8NCJ5 442 aa9.56□□□□□ -0.88
ATXN3-250ENST00000568290 SLC39A7Q92504 469 aa9.56□□□□□ -0.88
ATXN3-250ENST00000568290 PRAM1Q96QH2 718 aa9.56□□□□□ -0.88
ATXN3-250ENST00000568290 PLEKHF1Q96S99 279 aa9.56□□□□□ -0.88
ATXN3-250ENST00000568290 RRP7AQ9Y3A4 280 aaKnown RBP9.56□□□□□ -0.88
ATXN3-250ENST00000568290 EDC4Q6P2E9 1401 aaKnown RBP9.56□□□□□ -0.88
ATXN3-250ENST00000568290 GOLGA6L22H0YM25 854 aa9.55□□□□□ -0.88
ATXN3-250ENST00000568290 EXOSC9Q06265 439 aaKnown RBP9.55□□□□□ -0.88
ATXN3-250ENST00000568290 NFE2L2Q16236 605 aa9.55□□□□□ -0.88
ATXN3-250ENST00000568290 CDK19Q9BWU1 502 aa9.55□□□□□ -0.88
ATXN3-250ENST00000568290 C22orf23Q9BZE7 217 aa9.55□□□□□ -0.88
ATXN3-250ENST00000568290 COLQQ9Y215 455 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-250ENST00000568290 PTPRMP28827 1452 aa9.54□□□□□ -0.88
ATXN3-250ENST00000568290 TMEM131LA2VDJ0 1609 aa9.54□□□□□ -0.88
ATXN3-250ENST00000568290 C7P10643 843 aa9.54□□□□□ -0.88
ATXN3-250ENST00000568290 PAXIP1Q6ZW49 1069 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-250ENST00000568290 COG3Q96JB2 828 aa9.54□□□□□ -0.88
ATXN3-250ENST00000568290 GBP4Q96PP9 640 aa9.54□□□□□ -0.88
ATXN3-250ENST00000568290 STK26Q9P289 416 aa9.54□□□□□ -0.88
ATXN3-250ENST00000568290 PREX1Q8TCU6 1659 aa9.54□□□□□ -0.88
ATXN3-250ENST00000568290 PPP1R37O75864 691 aa9.53□□□□□ -0.88
ATXN3-250ENST00000568290 TRIM27P14373 513 aa9.53□□□□□ -0.88
ATXN3-250ENST00000568290 BMP2KLQ5H9B9 411 aa9.53□□□□□ -0.88
ATXN3-250ENST00000568290 SNX21Q969T3 373 aa9.53□□□□□ -0.88
ATXN3-250ENST00000568290 GGNBP2Q9H3C7 697 aa9.53□□□□□ -0.88
ATXN3-250ENST00000568290 RYDENQ9NUL5 291 aaKnown RBP9.53□□□□□ -0.88
ATXN3-250ENST00000568290 PCDHB15Q9Y5E8 787 aa9.53□□□□□ -0.88
ATXN3-250ENST00000568290 FAM135BQ49AJ0 1406 aa9.53□□□□□ -0.88
ATXN3-250ENST00000568290 RICTORQ6R327 1708 aa9.53□□□□□ -0.88
ATXN3-250ENST00000568290 MINK1Q8N4C8 1332 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-250ENST00000568290 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms