RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 CCAR2Q8N163 923 aaKnown RBP13.12□□□□□ -0.31
PALB2-206ENST00000568219 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
PALB2-206ENST00000568219 FKBP5Q13451 457 aaPredicted RBP13.12□□□□□ -0.31
PALB2-206ENST00000568219 USP48Q86UV5 1035 aa13.12□□□□□ -0.31
PALB2-206ENST00000568219 NSFL1CQ9UNZ2 370 aaKnown RBP13.12□□□□□ -0.31
PALB2-206ENST00000568219 DNMBPQ6XZF7 1577 aa13.12□□□□□ -0.31
PALB2-206ENST00000568219 WDR33Q9C0J8 1336 aaKnown RBP13.11□□□□□ -0.31
PALB2-206ENST00000568219 NRDCO43847 1150 aa13.11□□□□□ -0.31
PALB2-206ENST00000568219 CKAP2LQ8IYA6 745 aa13.11□□□□□ -0.31
PALB2-206ENST00000568219 ASXL1Q8IXJ9 1541 aa13.11□□□□□ -0.31
PALB2-206ENST00000568219 FILIP1Q7Z7B0 1213 aa13.11□□□□□ -0.31
PALB2-206ENST00000568219 FAM83GA6ND36 823 aa13.11□□□□□ -0.31
PALB2-206ENST00000568219 HSP90B1P14625 803 aaKnown RBP13.11□□□□□ -0.31
PALB2-206ENST00000568219 TTC22Q5TAA0 569 aa13.11□□□□□ -0.31
PALB2-206ENST00000568219 CCDC9Q9Y3X0 531 aaKnown RBP13.11□□□□□ -0.31
PALB2-206ENST00000568219 ZNF500O60304 480 aaPredicted RBP13.1□□□□□ -0.31
PALB2-206ENST00000568219 GADD45BO75293 160 aaPredicted RBP13.1□□□□□ -0.31
PALB2-206ENST00000568219 LMOD3Q0VAK6 560 aa13.1□□□□□ -0.31
PALB2-206ENST00000568219 F6X3S4 739 aa13.1□□□□□ -0.31
PALB2-206ENST00000568219 HOMER1Q86YM7 354 aa13.1□□□□□ -0.31
PALB2-206ENST00000568219 PLEKHM2Q8IWE5 1019 aa13.1□□□□□ -0.31
PALB2-206ENST00000568219 PRIMPOLQ96LW4 560 aa13.1□□□□□ -0.31
PALB2-206ENST00000568219 USP26Q9BXU7 913 aa13.1□□□□□ -0.31
PALB2-206ENST00000568219 CNPY2Q9Y2B0 182 aa13.1□□□□□ -0.31
PALB2-206ENST00000568219 GNL2Q13823 731 aaKnown RBP13.09□□□□□ -0.31
PALB2-206ENST00000568219 FAM184AQ8NB25 1140 aa13.09□□□□□ -0.31
PALB2-206ENST00000568219 ZBTB9Q96C00 473 aa13.09□□□□□ -0.31
PALB2-206ENST00000568219 ZNF692Q9BU19 519 aaPredicted RBP13.09□□□□□ -0.31
PALB2-206ENST00000568219 MCM2P49736 904 aa13.09□□□□□ -0.31
PALB2-206ENST00000568219 FMNL2Q96PY5 1086 aa13.09□□□□□ -0.31
PALB2-206ENST00000568219 PIK3C2GO75747 1445 aa13.09□□□□□ -0.31
PALB2-206ENST00000568219 KIF14Q15058 1648 aa13.09□□□□□ -0.31
PALB2-206ENST00000568219 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
PALB2-206ENST00000568219 CCDC192P0DO97 292 aa13.09□□□□□ -0.31
PALB2-206ENST00000568219 IQGAP2Q13576 1575 aa13.09□□□□□ -0.31
PALB2-206ENST00000568219 TRMT1Q9NXH9 659 aaKnown RBP13.09□□□□□ -0.31
PALB2-206ENST00000568219 CABP1Q9NZU7 370 aa13.09□□□□□ -0.31
PALB2-206ENST00000568219 PDE4CQ08493 712 aa13.08□□□□□ -0.31
PALB2-206ENST00000568219 ZBTB7BO15156 539 aaPredicted RBP13.08□□□□□ -0.32
PALB2-206ENST00000568219 MYRIPQ8NFW9 859 aa13.08□□□□□ -0.32
PALB2-206ENST00000568219 NUP153P49790 1475 aaKnown RBP13.08□□□□□ -0.32
PALB2-206ENST00000568219 TNNT1P13805 278 aa13.08□□□□□ -0.32
PALB2-206ENST00000568219 CCDC183Q5T5S1 534 aa13.08□□□□□ -0.32
PALB2-206ENST00000568219 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
PALB2-206ENST00000568219 H3BQV1 296 aa13.07□□□□□ -0.32
PALB2-206ENST00000568219 SURF6O75683 361 aaKnown RBP13.07□□□□□ -0.32
PALB2-206ENST00000568219 TERF1P54274 439 aa13.07□□□□□ -0.32
PALB2-206ENST00000568219 IFFO2Q5TF58 517 aa13.07□□□□□ -0.32
PALB2-206ENST00000568219 STAC3Q96MF2 364 aa13.07□□□□□ -0.32
PALB2-206ENST00000568219 A2MP01023 1474 aa13.07□□□□□ -0.32
PALB2-206ENST00000568219 CUL7Q14999 1698 aa13.07□□□□□ -0.32
PALB2-206ENST00000568219 STK3Q13188 491 aa13.07□□□□□ -0.32
PALB2-206ENST00000568219 KRT24Q2M2I5 525 aa13.07□□□□□ -0.32
PALB2-206ENST00000568219 RIOK3O14730 519 aaKnown RBP13.06□□□□□ -0.32
PALB2-206ENST00000568219 EIF2S2P20042 333 aaKnown RBP13.06□□□□□ -0.32
PALB2-206ENST00000568219 ALDH1L2Q3SY69 923 aa13.06□□□□□ -0.32
PALB2-206ENST00000568219 NUTM1Q86Y26 1132 aa13.06□□□□□ -0.32
PALB2-206ENST00000568219 CCDC83Q8IWF9 413 aa13.06□□□□□ -0.32
PALB2-206ENST00000568219 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
PALB2-206ENST00000568219 BCL2L12Q9HB09 334 aa13.06□□□□□ -0.32
PALB2-206ENST00000568219 TFIP11Q9UBB9 837 aaKnown RBP13.06□□□□□ -0.32
PALB2-206ENST00000568219 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.06□□□□□ -0.32
PALB2-206ENST00000568219 INSRP06213 1382 aa13.06□□□□□ -0.32
PALB2-206ENST00000568219 SCAF11Q99590 1463 aaKnown RBP13.06□□□□□ -0.32
PALB2-206ENST00000568219 RRS1Q15050 365 aaKnown RBP13.06□□□□□ -0.32
PALB2-206ENST00000568219 CWC27Q6UX04 472 aaKnown RBP13.06□□□□□ -0.32
PALB2-206ENST00000568219 C8orf58Q8NAV2 365 aa13.06□□□□□ -0.32
PALB2-206ENST00000568219 CCDC66A2RUB6 948 aa13.05□□□□□ -0.32
PALB2-206ENST00000568219 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
PALB2-206ENST00000568219 GSPT1P15170 499 aaKnown RBP13.05□□□□□ -0.32
PALB2-206ENST00000568219 CCDC186Q7Z3E2 898 aa13.05□□□□□ -0.32
PALB2-206ENST00000568219 TNMDQ9H2S6 317 aa13.05□□□□□ -0.32
PALB2-206ENST00000568219 POLR3AO14802 1390 aaPredicted RBP13.05□□□□□ -0.32
PALB2-206ENST00000568219 SCAPERQ9BY12 1400 aa13.05□□□□□ -0.32
PALB2-206ENST00000568219 LETM1O95202 739 aaPredicted RBP13.05□□□□□ -0.32
PALB2-206ENST00000568219 AEBP1Q8IUX7 1158 aa13.05□□□□□ -0.32
PALB2-206ENST00000568219 MEIS3Q99687 375 aa13.05□□□□□ -0.32
PALB2-206ENST00000568219 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
PALB2-206ENST00000568219 GCC2Q8IWJ2 1684 aa13.05□□□□□ -0.32
PALB2-206ENST00000568219 HTATSF1O43719 755 aaKnown RBP13.05□□□□□ -0.32
PALB2-206ENST00000568219 SKIDA1Q1XH10 827 aa13.05□□□□□ -0.32
PALB2-206ENST00000568219 MCM10Q7L590 875 aa13.05□□□□□ -0.32
PALB2-206ENST00000568219 MBIPQ9NS73 344 aa13.05□□□□□ -0.32
PALB2-206ENST00000568219 ARHGAP5Q13017 1502 aa13.05□□□□□ -0.32
PALB2-206ENST00000568219 PRAM1Q96QH2 718 aa13.05□□□□□ -0.32
PALB2-206ENST00000568219 CC2D2AQ9P2K1 1620 aa13.04□□□□□ -0.32
PALB2-206ENST00000568219 PTGS1P23219 599 aa13.04□□□□□ -0.32
PALB2-206ENST00000568219 TSPYL4Q9UJ04 414 aa13.04□□□□□ -0.32
PALB2-206ENST00000568219 FCHSD2O94868 740 aa13.04□□□□□ -0.32
PALB2-206ENST00000568219 ZKSCAN1P17029 563 aaPredicted RBP13.04□□□□□ -0.32
PALB2-206ENST00000568219 LARP1BQ659C4 914 aaKnown RBP13.04□□□□□ -0.32
PALB2-206ENST00000568219 RPAP2Q8IXW5 612 aaPredicted RBP13.04□□□□□ -0.32
PALB2-206ENST00000568219 LRRCC1Q9C099 1032 aa13.04□□□□□ -0.32
PALB2-206ENST00000568219 URB2Q14146 1524 aaKnown RBP13.04□□□□□ -0.32
PALB2-206ENST00000568219 ARHGEF12Q9NZN5 1544 aa13.04□□□□□ -0.32
PALB2-206ENST00000568219 FAM177A1Q8N128 213 aaPredicted RBP13.04□□□□□ -0.32
PALB2-206ENST00000568219 PHACTR3Q96KR7 559 aa13.04□□□□□ -0.32
PALB2-206ENST00000568219 VAMP4O75379 141 aa13.03□□□□□ -0.32
PALB2-206ENST00000568219 MLECQ14165 292 aa13.03□□□□□ -0.32
PALB2-206ENST00000568219 NFE2L2Q16236 605 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms